RNA–Protein interactions for RNA: ENST00000468469.5

COMMD3-207, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 526 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-207ENST00000468469 RTEL1-TNFRSF6BF6WH68 1400 aa5.6□□□□□ -1.51
COMMD3-207ENST00000468469 DAPK1P53355 1430 aa5.6□□□□□ -1.51
COMMD3-207ENST00000468469 ARID4BQ4LE39 1312 aaPredicted RBP5.6□□□□□ -1.51
COMMD3-207ENST00000468469 ADAMTSL3P82987 1691 aa5.59□□□□□ -1.51
COMMD3-207ENST00000468469 MADDQ8WXG6 1647 aa5.59□□□□□ -1.51
COMMD3-207ENST00000468469 ABCC5O15440 1437 aa5.59□□□□□ -1.51
COMMD3-207ENST00000468469 RSPH4AQ5TD94 716 aa5.59□□□□□ -1.51
COMMD3-207ENST00000468469 PPARGC1BQ86YN6 1023 aaKnown RBP5.59□□□□□ -1.51
COMMD3-207ENST00000468469 FER1L4A9Z1Z3 1794 aa5.58□□□□□ -1.52
COMMD3-207ENST00000468469 FAM50AQ14320 339 aaKnown RBP5.58□□□□□ -1.52
COMMD3-207ENST00000468469 RIMS1Q86UR5 1692 aaKnown RBP5.58□□□□□ -1.52
COMMD3-207ENST00000468469 EIF2AK4Q9P2K8 1649 aaKnown RBP5.58□□□□□ -1.52
COMMD3-207ENST00000468469 DUOX2Q9NRD8 1548 aa5.58□□□□□ -1.52
COMMD3-207ENST00000468469 RRBP1Q9P2E9 1410 aaKnown RBP5.57□□□□□ -1.52
COMMD3-207ENST00000468469 TSPY4P0CV99 314 aa5.57□□□□□ -1.52
COMMD3-207ENST00000468469 TSPY10P0CW01 314 aa5.57□□□□□ -1.52
COMMD3-207ENST00000468469 ADGRL2O95490 1459 aa5.57□□□□□ -1.52
COMMD3-207ENST00000468469 ERBINQ96RT1 1412 aa5.57□□□□□ -1.52
COMMD3-207ENST00000468469 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.56□□□□□ -1.52
COMMD3-207ENST00000468469 KIF15Q9NS87 1388 aa5.56□□□□□ -1.52
COMMD3-207ENST00000468469 RNF17Q9BXT8 1623 aaKnown RBP5.56□□□□□ -1.52
COMMD3-207ENST00000468469 KDM4FA0A1W2PPD8 638 aa5.56□□□□□ -1.52
COMMD3-207ENST00000468469 MLECQ14165 292 aa5.56□□□□□ -1.52
COMMD3-207ENST00000468469 SAMD1Q6SPF0 538 aaPredicted RBP5.56□□□□□ -1.52
COMMD3-207ENST00000468469 FAM135AQ9P2D6 1515 aa5.56□□□□□ -1.52
COMMD3-207ENST00000468469 PTPRMP28827 1452 aa5.56□□□□□ -1.52
COMMD3-207ENST00000468469 DHX29Q7Z478 1369 aaKnown RBP5.55□□□□□ -1.52
COMMD3-207ENST00000468469 ANKRD30AQ9BXX3 1397 aa5.55□□□□□ -1.52
COMMD3-207ENST00000468469 PRDM15P57071 1507 aaPredicted RBP5.55□□□□□ -1.52
COMMD3-207ENST00000468469 KDM5DQ9BY66 1539 aa5.55□□□□□ -1.52
COMMD3-207ENST00000468469 PIP4P2Q8N4L2 257 aa5.55□□□□□ -1.52
COMMD3-207ENST00000468469 ZC3H13Q5T200 1668 aaKnown RBP5.55□□□□□ -1.52
COMMD3-207ENST00000468469 CNTLNQ9NXG0 1405 aa5.55□□□□□ -1.52
COMMD3-207ENST00000468469 MROH2AA6NES4 1674 aa5.54□□□□□ -1.52
COMMD3-207ENST00000468469 CLTCQ00610 1675 aaKnown RBP5.54□□□□□ -1.52
COMMD3-207ENST00000468469 MROH1Q8NDA8 1641 aa5.54□□□□□ -1.52
COMMD3-207ENST00000468469 PTPRKQ15262 1439 aa5.54□□□□□ -1.52
COMMD3-207ENST00000468469 ROCK1Q13464 1354 aa5.54□□□□□ -1.52
COMMD3-207ENST00000468469 GCC2Q8IWJ2 1684 aa5.53□□□□□ -1.52
COMMD3-207ENST00000468469 DEPDC5O75140 1603 aa5.53□□□□□ -1.52
COMMD3-207ENST00000468469 HAX1O00165 279 aa5.53□□□□□ -1.52
COMMD3-207ENST00000468469 POLA2Q14181 598 aa5.53□□□□□ -1.52
COMMD3-207ENST00000468469 CHIC2Q9UKJ5 165 aa5.53□□□□□ -1.52
COMMD3-207ENST00000468469 NCOA1Q15788 1441 aa5.53□□□□□ -1.52
COMMD3-207ENST00000468469 ABCC3O15438 1527 aa5.53□□□□□ -1.52
COMMD3-207ENST00000468469 C3P01024 1663 aa5.53□□□□□ -1.52
COMMD3-207ENST00000468469 UNC13BO14795 1591 aa5.52□□□□□ -1.53
COMMD3-207ENST00000468469 ANKRD50Q9ULJ7 1429 aa5.52□□□□□ -1.53
COMMD3-207ENST00000468469 KIF3BO15066 747 aa5.52□□□□□ -1.53
COMMD3-207ENST00000468469 ITGAEP38570 1179 aa5.52□□□□□ -1.53
COMMD3-207ENST00000468469 GGT6Q6P531 493 aa5.52□□□□□ -1.53
COMMD3-207ENST00000468469 ESF1Q9H501 851 aaKnown RBP5.52□□□□□ -1.53
COMMD3-207ENST00000468469 RRP7BPQ9NSQ0 103 aa5.52□□□□□ -1.53
COMMD3-207ENST00000468469 CAMSAP1Q5T5Y3 1602 aa5.52□□□□□ -1.53
COMMD3-207ENST00000468469 AKT1S1Q96B36 256 aa5.51□□□□□ -1.53
COMMD3-207ENST00000468469 MYO3AQ8NEV4 1616 aa5.51□□□□□ -1.53
COMMD3-207ENST00000468469 CEP152O94986 1710 aa5.51□□□□□ -1.53
COMMD3-207ENST00000468469 VWDEQ8N2E2 1590 aa5.5□□□□□ -1.53
COMMD3-207ENST00000468469 PREX1Q8TCU6 1659 aa5.5□□□□□ -1.53
COMMD3-207ENST00000468469 NPATQ14207 1427 aa5.5□□□□□ -1.53
COMMD3-207ENST00000468469 PZPP20742 1482 aa5.5□□□□□ -1.53
COMMD3-207ENST00000468469 LMTK3Q96Q04 1460 aa5.5□□□□□ -1.53
COMMD3-207ENST00000468469 HFM1A2PYH4 1435 aa5.49□□□□□ -1.53
COMMD3-207ENST00000468469 EFCAB6Q5THR3 1501 aa5.49□□□□□ -1.53
COMMD3-207ENST00000468469 LMTK2Q8IWU2 1503 aa5.49□□□□□ -1.53
COMMD3-207ENST00000468469 ZMYM3Q14202 1370 aa5.49□□□□□ -1.53
COMMD3-207ENST00000468469 KANK1Q14678 1352 aa5.49□□□□□ -1.53
COMMD3-207ENST00000468469 WASHC2CQ9Y4E1 1318 aa5.48□□□□□ -1.53
COMMD3-207ENST00000468469 NAIPQ13075 1403 aa5.48□□□□□ -1.53
COMMD3-207ENST00000468469 UHRF1BP1Q6BDS2 1440 aa5.48□□□□□ -1.53
COMMD3-207ENST00000468469 IQGAP3Q86VI3 1631 aa5.48□□□□□ -1.53
COMMD3-207ENST00000468469 TET3O43151 1660 aa5.48□□□□□ -1.53
COMMD3-207ENST00000468469 ZNF142P52746 1687 aaPredicted RBP5.48□□□□□ -1.53
COMMD3-207ENST00000468469 SPATA31D1Q6ZQQ2 1576 aa5.48□□□□□ -1.53
COMMD3-207ENST00000468469 ERVK-7P63135 1459 aa5.48□□□□□ -1.53
COMMD3-207ENST00000468469 CEBPAP49715 358 aaPredicted RBP5.48□□□□□ -1.53
COMMD3-207ENST00000468469 REM2Q8IYK8 340 aaPredicted RBP5.48□□□□□ -1.53
COMMD3-207ENST00000468469 CEP170BQ9Y4F5 1589 aaPredicted RBP5.47□□□□□ -1.53
COMMD3-207ENST00000468469 EVX2Q03828 476 aa5.47□□□□□ -1.53
COMMD3-207ENST00000468469 ARHGAP31Q2M1Z3 1444 aa5.47□□□□□ -1.53
COMMD3-207ENST00000468469 RPRD2Q5VT52 1461 aaKnown RBP5.46□□□□□ -1.53
COMMD3-207ENST00000468469 TNRQ92752 1358 aa5.46□□□□□ -1.54
COMMD3-207ENST00000468469 NLRP1Q9C000 1473 aa5.45□□□□□ -1.54
COMMD3-207ENST00000468469 E9PCH4 1651 aa5.45□□□□□ -1.54
COMMD3-207ENST00000468469 A2ML1A8K2U0 1454 aa5.45□□□□□ -1.54
COMMD3-207ENST00000468469 NUP155O75694 1391 aa5.44□□□□□ -1.54
COMMD3-207ENST00000468469 PITPNM1O00562 1244 aa5.44□□□□□ -1.54
COMMD3-207ENST00000468469 SYNMO15061 1565 aa5.44□□□□□ -1.54
COMMD3-207ENST00000468469 FXR2P51116 673 aaKnown RBP eCLIP5.44□□□□□ -1.54
COMMD3-207ENST00000468469 PLA2R1Q13018 1463 aa5.44□□□□□ -1.54
COMMD3-207ENST00000468469 ADGRB3O60242 1522 aa5.43□□□□□ -1.54
COMMD3-207ENST00000468469 UGGT1Q9NYU2 1555 aa5.43□□□□□ -1.54
COMMD3-207ENST00000468469 NOS1P29475 1434 aa5.43□□□□□ -1.54
COMMD3-207ENST00000468469 SETD5Q9C0A6 1442 aa5.43□□□□□ -1.54
COMMD3-207ENST00000468469 FBXO31Q5XUX0 539 aaPredicted RBP5.43□□□□□ -1.54
COMMD3-207ENST00000468469 PIK3C2BO00750 1634 aa5.43□□□□□ -1.54
COMMD3-207ENST00000468469 TRPM2O94759 1503 aa5.43□□□□□ -1.54
COMMD3-207ENST00000468469 SPHKAPQ2M3C7 1700 aa5.43□□□□□ -1.54
COMMD3-207ENST00000468469 RAB3GAP2Q9H2M9 1393 aa5.42□□□□□ -1.54
COMMD3-207ENST00000468469 HSPA2P54652 639 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms