RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 WASHC2CQ9Y4E1 1318 aa22.55■■□□□ 1.2
COMMD3-206ENST00000468179 FAM135AQ9P2D6 1515 aa22.54■■□□□ 1.2
COMMD3-206ENST00000468179 ABCC5O15440 1437 aa22.54■■□□□ 1.2
COMMD3-206ENST00000468179 DAPK1P53355 1430 aa22.52■■□□□ 1.2
COMMD3-206ENST00000468179 CLTCQ00610 1675 aaKnown RBP22.51■■□□□ 1.19
COMMD3-206ENST00000468179 FAM50AQ14320 339 aaKnown RBP22.51■■□□□ 1.19
COMMD3-206ENST00000468179 DUOX2Q9NRD8 1548 aa22.5■■□□□ 1.19
COMMD3-206ENST00000468179 DMRT2Q9Y5R5 561 aa22.5■■□□□ 1.19
COMMD3-206ENST00000468179 RRP7BPQ9NSQ0 103 aa22.49■■□□□ 1.19
COMMD3-206ENST00000468179 ANKRD30AQ9BXX3 1397 aa22.49■■□□□ 1.19
COMMD3-206ENST00000468179 KIF15Q9NS87 1388 aa22.49■■□□□ 1.19
COMMD3-206ENST00000468179 KDM5DQ9BY66 1539 aa22.48■■□□□ 1.19
COMMD3-206ENST00000468179 DNMT1P26358 1616 aaKnown RBP22.48■■□□□ 1.19
COMMD3-206ENST00000468179 PTPRKQ15262 1439 aa22.47■■□□□ 1.19
COMMD3-206ENST00000468179 EIF2AK4Q9P2K8 1649 aaKnown RBP22.45■■□□□ 1.19
COMMD3-206ENST00000468179 CHIC2Q9UKJ5 165 aa22.45■■□□□ 1.18
COMMD3-206ENST00000468179 ERBINQ96RT1 1412 aa22.45■■□□□ 1.18
COMMD3-206ENST00000468179 CROCC2H7BZ55 1655 aa22.44■■□□□ 1.18
COMMD3-206ENST00000468179 RNF17Q9BXT8 1623 aaKnown RBP22.41■■□□□ 1.18
COMMD3-206ENST00000468179 PZPP20742 1482 aa22.41■■□□□ 1.18
COMMD3-206ENST00000468179 NCOA1Q15788 1441 aa22.39■■□□□ 1.18
COMMD3-206ENST00000468179 KANK1Q14678 1352 aa22.38■■□□□ 1.17
COMMD3-206ENST00000468179 TNRQ92752 1358 aa22.38■■□□□ 1.17
COMMD3-206ENST00000468179 FBXO31Q5XUX0 539 aaPredicted RBP22.37■■□□□ 1.17
COMMD3-206ENST00000468179 ADGRL2O95490 1459 aa22.37■■□□□ 1.17
COMMD3-206ENST00000468179 ZC3H13Q5T200 1668 aaKnown RBP22.36■■□□□ 1.17
COMMD3-206ENST00000468179 PPARGC1BQ86YN6 1023 aaKnown RBP22.35■■□□□ 1.17
COMMD3-206ENST00000468179 ABCC3O15438 1527 aa22.35■■□□□ 1.17
COMMD3-206ENST00000468179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.34■■□□□ 1.17
COMMD3-206ENST00000468179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.34■■□□□ 1.17
COMMD3-206ENST00000468179 PTPRTO14522 1441 aa22.33■■□□□ 1.17
COMMD3-206ENST00000468179 MYO3AQ8NEV4 1616 aa22.33■■□□□ 1.16
COMMD3-206ENST00000468179 A2ML1A8K2U0 1454 aa22.33■■□□□ 1.16
COMMD3-206ENST00000468179 PKD2Q13563 968 aa22.32■■□□□ 1.16
COMMD3-206ENST00000468179 CEP170BQ9Y4F5 1589 aaPredicted RBP22.32■■□□□ 1.16
COMMD3-206ENST00000468179 ZNF142P52746 1687 aaPredicted RBP22.3■■□□□ 1.16
COMMD3-206ENST00000468179 CAMSAP1Q5T5Y3 1602 aa22.3■■□□□ 1.16
COMMD3-206ENST00000468179 PLA2R1Q13018 1463 aa22.3■■□□□ 1.16
COMMD3-206ENST00000468179 NLRP1Q9C000 1473 aa22.3■■□□□ 1.16
COMMD3-206ENST00000468179 MROH1Q8NDA8 1641 aa22.3■■□□□ 1.16
COMMD3-206ENST00000468179 PRDM15P57071 1507 aaPredicted RBP22.29■■□□□ 1.16
COMMD3-206ENST00000468179 ILDR1Q86SU0 546 aaPredicted RBP22.29■■□□□ 1.16
COMMD3-206ENST00000468179 THEMISQ8N1K5 641 aaPredicted RBP22.29■■□□□ 1.16
COMMD3-206ENST00000468179 STRCQ7RTU9 1775 aa22.28■■□□□ 1.16
COMMD3-206ENST00000468179 ANKRD50Q9ULJ7 1429 aa22.28■■□□□ 1.16
COMMD3-206ENST00000468179 ROCK1Q13464 1354 aa22.28■■□□□ 1.16
COMMD3-206ENST00000468179 ARHGAP31Q2M1Z3 1444 aa22.27■■□□□ 1.16
COMMD3-206ENST00000468179 NCKAP5LQ9HCH0 1330 aa22.25■■□□□ 1.15
COMMD3-206ENST00000468179 FBXO41Q8TF61 875 aa22.25■■□□□ 1.15
COMMD3-206ENST00000468179 DEPDC5O75140 1603 aa22.24■■□□□ 1.15
COMMD3-206ENST00000468179 ERVK-7P63135 1459 aa22.24■■□□□ 1.15
COMMD3-206ENST00000468179 SPATA31D1Q6ZQQ2 1576 aa22.24■■□□□ 1.15
COMMD3-206ENST00000468179 ITGAEP38570 1179 aa22.24■■□□□ 1.15
COMMD3-206ENST00000468179 CERKQ8TCT0 537 aa22.23■■□□□ 1.15
COMMD3-206ENST00000468179 LMTK2Q8IWU2 1503 aa22.21■■□□□ 1.15
COMMD3-206ENST00000468179 ANKLE2Q86XL3 938 aa22.21■■□□□ 1.15
COMMD3-206ENST00000468179 CEP152O94986 1710 aa22.2■■□□□ 1.15
COMMD3-206ENST00000468179 UGGT1Q9NYU2 1555 aa22.19■■□□□ 1.14
COMMD3-206ENST00000468179 RRBP1Q9P2E9 1410 aaKnown RBP22.19■■□□□ 1.14
COMMD3-206ENST00000468179 VWDEQ8N2E2 1590 aa22.18■■□□□ 1.14
COMMD3-206ENST00000468179 SCAF1Q9H7N4 1312 aaKnown RBP22.16■■□□□ 1.14
COMMD3-206ENST00000468179 STAG3Q9UJ98 1225 aa22.13■■□□□ 1.13
COMMD3-206ENST00000468179 RPRD2Q5VT52 1461 aaKnown RBP22.11■■□□□ 1.13
COMMD3-206ENST00000468179 SLC52A1Q9NWF4 448 aa22.1■■□□□ 1.13
COMMD3-206ENST00000468179 EFCAB6Q5THR3 1501 aa22.1■■□□□ 1.13
COMMD3-206ENST00000468179 MAPK8IP2Q13387 824 aaPredicted RBP22.08■■□□□ 1.13
COMMD3-206ENST00000468179 NOS1P29475 1434 aa22.08■■□□□ 1.12
COMMD3-206ENST00000468179 EID1Q9Y6B2 187 aa22.07■■□□□ 1.12
COMMD3-206ENST00000468179 UNC13BO14795 1591 aa22.07■■□□□ 1.12
COMMD3-206ENST00000468179 NUP155O75694 1391 aa22.07■■□□□ 1.12
COMMD3-206ENST00000468179 CFAP65Q6ZU64 1925 aaKnown RBP22.06■■□□□ 1.12
COMMD3-206ENST00000468179 IDI1Q13907 227 aa22.06■■□□□ 1.12
COMMD3-206ENST00000468179 MED14O60244 1454 aa22.06■■□□□ 1.12
COMMD3-206ENST00000468179 NPHP4O75161 1426 aaPredicted RBP22.06■■□□□ 1.12
COMMD3-206ENST00000468179 ZNF335Q9H4Z2 1342 aaPredicted RBP22.06■■□□□ 1.12
COMMD3-206ENST00000468179 POLR1AO95602 1720 aaPredicted RBP22.04■■□□□ 1.12
COMMD3-206ENST00000468179 LTBP4Q8N2S1 1624 aa22.04■■□□□ 1.12
COMMD3-206ENST00000468179 TXNDC2Q86VQ3 553 aa22.04■■□□□ 1.12
COMMD3-206ENST00000468179 IQSEC2Q5JU85 1478 aa22.03■■□□□ 1.12
COMMD3-206ENST00000468179 TET3O43151 1660 aa22.03■■□□□ 1.12
COMMD3-206ENST00000468179 NEURL4Q96JN8 1562 aa22.01■■□□□ 1.11
COMMD3-206ENST00000468179 UBR1Q8IWV7 1749 aa22.01■■□□□ 1.11
COMMD3-206ENST00000468179 TMEM2Q9UHN6 1383 aa22■■□□□ 1.11
COMMD3-206ENST00000468179 SLIT1O75093 1534 aa22■■□□□ 1.11
COMMD3-206ENST00000468179 SCAF11Q99590 1463 aaKnown RBP22■■□□□ 1.11
COMMD3-206ENST00000468179 ARHGAP23Q9P227 1491 aa21.99■■□□□ 1.11
COMMD3-206ENST00000468179 GCC2Q8IWJ2 1684 aa21.99■■□□□ 1.11
COMMD3-206ENST00000468179 HDGFP51858 240 aaKnown RBP21.99■■□□□ 1.11
COMMD3-206ENST00000468179 IQGAP3Q86VI3 1631 aa21.99■■□□□ 1.11
COMMD3-206ENST00000468179 SYNMO15061 1565 aa21.98■■□□□ 1.11
COMMD3-206ENST00000468179 PIK3C2BO00750 1634 aa21.98■■□□□ 1.11
COMMD3-206ENST00000468179 KDM5AP29375 1690 aaKnown RBP21.97■■□□□ 1.11
COMMD3-206ENST00000468179 NAIPQ13075 1403 aa21.97■■□□□ 1.11
COMMD3-206ENST00000468179 LTKP29376 864 aa21.97■■□□□ 1.11
COMMD3-206ENST00000468179 HFM1A2PYH4 1435 aa21.95■■□□□ 1.11
COMMD3-206ENST00000468179 CPS1P31327 1500 aa21.95■■□□□ 1.1
COMMD3-206ENST00000468179 IQGAP1P46940 1657 aa21.94■■□□□ 1.1
COMMD3-206ENST00000468179 ADGRB3O60242 1522 aa21.93■■□□□ 1.1
COMMD3-206ENST00000468179 TRIM52Q96A61 297 aa21.92■■□□□ 1.1
COMMD3-206ENST00000468179 CHGAP10645 457 aaKnown RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms