RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 IQGAP3Q86VI3 1631 aa29.77■■■□□ 2.36
TMEM53-207ENST00000468117 TEX14Q8IWB6 1497 aa29.76■■■□□ 2.35
TMEM53-207ENST00000468117 DHX29Q7Z478 1369 aaKnown RBP29.75■■■□□ 2.35
TMEM53-207ENST00000468117 EIF2AK4Q9P2K8 1649 aaKnown RBP29.73■■■□□ 2.35
TMEM53-207ENST00000468117 DEPDC5O75140 1603 aa29.73■■■□□ 2.35
TMEM53-207ENST00000468117 ABCA6Q8N139 1617 aa29.73■■■□□ 2.35
TMEM53-207ENST00000468117 FRMPD1Q5SYB0 1578 aa29.72■■■□□ 2.35
TMEM53-207ENST00000468117 RPRD2Q5VT52 1461 aaKnown RBP29.71■■■□□ 2.35
TMEM53-207ENST00000468117 A2MP01023 1474 aa29.69■■■□□ 2.34
TMEM53-207ENST00000468117 KIF3BO15066 747 aa29.68■■■□□ 2.34
TMEM53-207ENST00000468117 PPP1R15AO75807 674 aaPredicted RBP29.68■■■□□ 2.34
TMEM53-207ENST00000468117 DIP2CQ9Y2E4 1556 aa29.64■■■□□ 2.34
TMEM53-207ENST00000468117 ZNF316A6NFI3 1004 aaPredicted RBP29.62■■■□□ 2.33
TMEM53-207ENST00000468117 MROH1Q8NDA8 1641 aa29.62■■■□□ 2.33
TMEM53-207ENST00000468117 PRDM15P57071 1507 aaPredicted RBP29.61■■■□□ 2.33
TMEM53-207ENST00000468117 ZMYM4Q5VZL5 1548 aa29.61■■■□□ 2.33
TMEM53-207ENST00000468117 YEATS2Q9ULM3 1422 aa29.59■■■□□ 2.33
TMEM53-207ENST00000468117 VWDEQ8N2E2 1590 aa29.58■■■□□ 2.33
TMEM53-207ENST00000468117 DNAJC5Q9H3Z4 198 aa29.58■■■□□ 2.33
TMEM53-207ENST00000468117 L3MBTL2Q969R5 705 aa29.57■■■□□ 2.32
TMEM53-207ENST00000468117 RNF17Q9BXT8 1623 aaKnown RBP29.57■■■□□ 2.32
TMEM53-207ENST00000468117 KANK1Q14678 1352 aa29.57■■■□□ 2.32
TMEM53-207ENST00000468117 E9PCH4 1651 aa29.56■■■□□ 2.32
TMEM53-207ENST00000468117 BCORL1Q5H9F3 1711 aa29.55■■■□□ 2.32
TMEM53-207ENST00000468117 TET3O43151 1660 aa29.55■■■□□ 2.32
TMEM53-207ENST00000468117 COL17A1Q9UMD9 1497 aaPredicted RBP29.53■■■□□ 2.32
TMEM53-207ENST00000468117 PLA2R1Q13018 1463 aa29.52■■■□□ 2.32
TMEM53-207ENST00000468117 CEP152O94986 1710 aa29.5■■■□□ 2.31
TMEM53-207ENST00000468117 CCDC144AA2RUR9 1427 aa29.47■■■□□ 2.31
TMEM53-207ENST00000468117 GGT6Q6P531 493 aa29.47■■■□□ 2.31
TMEM53-207ENST00000468117 ATP10AO60312 1499 aa29.46■■■□□ 2.31
TMEM53-207ENST00000468117 SPHKAPQ2M3C7 1700 aa29.44■■■□□ 2.3
TMEM53-207ENST00000468117 TRHP20396 242 aaPredicted RBP29.42■■■□□ 2.3
TMEM53-207ENST00000468117 EFCAB6Q5THR3 1501 aa29.42■■■□□ 2.3
TMEM53-207ENST00000468117 LMTK2Q8IWU2 1503 aa29.41■■■□□ 2.3
TMEM53-207ENST00000468117 TRPM2O94759 1503 aa29.37■■■□□ 2.29
TMEM53-207ENST00000468117 PTPRTO14522 1441 aa29.36■■■□□ 2.29
TMEM53-207ENST00000468117 CFAP65Q6ZU64 1925 aaKnown RBP29.35■■■□□ 2.29
TMEM53-207ENST00000468117 REREQ9P2R6 1566 aa29.35■■■□□ 2.29
TMEM53-207ENST00000468117 NBPF8Q3BBV2 869 aa29.35■■■□□ 2.29
TMEM53-207ENST00000468117 ABCC3O15438 1527 aa29.35■■■□□ 2.29
TMEM53-207ENST00000468117 WASHC2CQ9Y4E1 1318 aa29.34■■■□□ 2.29
TMEM53-207ENST00000468117 ARHGEF40Q8TER5 1519 aa29.34■■■□□ 2.29
TMEM53-207ENST00000468117 SIGLEC1Q9BZZ2 1709 aa29.32■■■□□ 2.28
TMEM53-207ENST00000468117 DIEXFQ68CQ4 756 aaKnown RBP29.32■■■□□ 2.28
TMEM53-207ENST00000468117 CLTCL1P53675 1640 aa29.31■■■□□ 2.28
TMEM53-207ENST00000468117 CAMSAP1Q5T5Y3 1602 aa29.31■■■□□ 2.28
TMEM53-207ENST00000468117 RGL3Q3MIN7 710 aa29.29■■■□□ 2.28
TMEM53-207ENST00000468117 ZC3H13Q5T200 1668 aaKnown RBP29.29■■■□□ 2.28
TMEM53-207ENST00000468117 NPATQ14207 1427 aa29.28■■■□□ 2.28
TMEM53-207ENST00000468117 AGLP35573 1532 aa29.27■■■□□ 2.28
TMEM53-207ENST00000468117 ZNF326Q5BKZ1 582 aaKnown RBP29.27■■■□□ 2.28
TMEM53-207ENST00000468117 DCAF11Q8TEB1 546 aa29.27■■■□□ 2.28
TMEM53-207ENST00000468117 HIRIP3Q9BW71 556 aaPredicted RBP29.26■■■□□ 2.27
TMEM53-207ENST00000468117 KDM2AQ9Y2K7 1162 aa29.25■■■□□ 2.27
TMEM53-207ENST00000468117 UGGT1Q9NYU2 1555 aa29.24■■■□□ 2.27
TMEM53-207ENST00000468117 UHRF1BP1Q6BDS2 1440 aa29.23■■■□□ 2.27
TMEM53-207ENST00000468117 SPATA31E1Q6ZUB1 1445 aa29.22■■■□□ 2.27
TMEM53-207ENST00000468117 KIF1BO60333 1816 aa29.19■■■□□ 2.26
TMEM53-207ENST00000468117 ARHGAP31Q2M1Z3 1444 aa29.15■■■□□ 2.26
TMEM53-207ENST00000468117 CNTLNQ9NXG0 1405 aa29.14■■■□□ 2.25
TMEM53-207ENST00000468117 MLECQ14165 292 aa29.13■■■□□ 2.25
TMEM53-207ENST00000468117 HSPA5P11021 654 aaKnown RBP29.13■■■□□ 2.25
TMEM53-207ENST00000468117 EIF4G2P78344 907 aaKnown RBP eCLIP29.13■■■□□ 2.25
TMEM53-207ENST00000468117 CLTCQ00610 1675 aaKnown RBP29.13■■■□□ 2.25
TMEM53-207ENST00000468117 RALGAPBQ86X10 1494 aa29.12■■■□□ 2.25
TMEM53-207ENST00000468117 PRAG1Q86YV5 1406 aa29.12■■■□□ 2.25
TMEM53-207ENST00000468117 NOS1P29475 1434 aa29.11■■■□□ 2.25
TMEM53-207ENST00000468117 MROH2AA6NES4 1674 aa29.1■■■□□ 2.25
TMEM53-207ENST00000468117 NEURL4Q96JN8 1562 aa29.1■■■□□ 2.25
TMEM53-207ENST00000468117 PPP6R1Q9UPN7 881 aa29.09■■■□□ 2.25
TMEM53-207ENST00000468117 SYNMO15061 1565 aa29.09■■■□□ 2.25
TMEM53-207ENST00000468117 TRPM1Q7Z4N2 1603 aa29.08■■■□□ 2.25
TMEM53-207ENST00000468117 PREX1Q8TCU6 1659 aa29.08■■■□□ 2.25
TMEM53-207ENST00000468117 ARID4BQ4LE39 1312 aaPredicted RBP29.05■■■□□ 2.24
TMEM53-207ENST00000468117 PIK3C2BO00750 1634 aa29.05■■■□□ 2.24
TMEM53-207ENST00000468117 ADGRB3O60242 1522 aa29.03■■■□□ 2.24
TMEM53-207ENST00000468117 MADDQ8WXG6 1647 aa29.01■■■□□ 2.23
TMEM53-207ENST00000468117 CHGAP10645 457 aaKnown RBP29.01■■■□□ 2.23
TMEM53-207ENST00000468117 IFT172Q9UG01 1749 aa29.01■■■□□ 2.23
TMEM53-207ENST00000468117 CARD11Q9BXL7 1154 aa29■■■□□ 2.23
TMEM53-207ENST00000468117 ROCK2O75116 1388 aaKnown RBP29■■■□□ 2.23
TMEM53-207ENST00000468117 USP47Q96K76 1375 aa28.99■■■□□ 2.23
TMEM53-207ENST00000468117 FBXO31Q5XUX0 539 aaPredicted RBP28.99■■■□□ 2.23
TMEM53-207ENST00000468117 ERVK-7P63135 1459 aa28.96■■■□□ 2.23
TMEM53-207ENST00000468117 NBPF1Q3BBV0 1214 aa28.96■■■□□ 2.23
TMEM53-207ENST00000468117 STAC3Q96MF2 364 aa28.96■■■□□ 2.23
TMEM53-207ENST00000468117 ESF1Q9H501 851 aaKnown RBP28.95■■■□□ 2.23
TMEM53-207ENST00000468117 DDX10Q13206 875 aaKnown RBP28.94■■■□□ 2.22
TMEM53-207ENST00000468117 IDI1Q13907 227 aa28.94■■■□□ 2.22
TMEM53-207ENST00000468117 PPLO60437 1756 aa28.93■■■□□ 2.22
TMEM53-207ENST00000468117 SLC52A1Q9NWF4 448 aa28.93■■■□□ 2.22
TMEM53-207ENST00000468117 MYO5BQ9ULV0 1848 aa28.92■■■□□ 2.22
TMEM53-207ENST00000468117 MYOM2P54296 1465 aa28.92■■■□□ 2.22
TMEM53-207ENST00000468117 GPRASP1Q5JY77 1395 aa28.9■■■□□ 2.22
TMEM53-207ENST00000468117 LAMC1P11047 1609 aa28.9■■■□□ 2.22
TMEM53-207ENST00000468117 SPATA31D1Q6ZQQ2 1576 aa28.89■■■□□ 2.22
TMEM53-207ENST00000468117 ZMYM3Q14202 1370 aa28.89■■■□□ 2.22
TMEM53-207ENST00000468117 WASHC2AQ641Q2 1341 aa28.89■■■□□ 2.22
TMEM53-207ENST00000468117 POLR1AO95602 1720 aaPredicted RBP28.89■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms