RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 RNF17Q9BXT8 1623 aaKnown RBP28.74■■■□□ 2.19
YBX1-204ENST00000467957 PPARGC1BQ86YN6 1023 aaKnown RBP28.74■■■□□ 2.19
YBX1-204ENST00000467957 NPATQ14207 1427 aa28.72■■■□□ 2.19
YBX1-204ENST00000467957 ANKRD30AQ9BXX3 1397 aa28.72■■■□□ 2.19
YBX1-204ENST00000467957 KDM5DQ9BY66 1539 aa28.71■■■□□ 2.19
YBX1-204ENST00000467957 RRP7BPQ9NSQ0 103 aa28.71■■■□□ 2.19
YBX1-204ENST00000467957 ADGRL2O95490 1459 aa28.71■■■□□ 2.19
YBX1-204ENST00000467957 ERBINQ96RT1 1412 aa28.7■■■□□ 2.19
YBX1-204ENST00000467957 NCOA1Q15788 1441 aa28.69■■■□□ 2.18
YBX1-204ENST00000467957 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.69■■■□□ 2.18
YBX1-204ENST00000467957 CHIC2Q9UKJ5 165 aa28.68■■■□□ 2.18
YBX1-204ENST00000467957 UHRF1BP1Q6BDS2 1440 aa28.68■■■□□ 2.18
YBX1-204ENST00000467957 PTPRKQ15262 1439 aa28.66■■■□□ 2.18
YBX1-204ENST00000467957 WASHC2CQ9Y4E1 1318 aa28.66■■■□□ 2.18
YBX1-204ENST00000467957 MROH1Q8NDA8 1641 aa28.65■■■□□ 2.18
YBX1-204ENST00000467957 ZC3H13Q5T200 1668 aaKnown RBP28.63■■■□□ 2.17
YBX1-204ENST00000467957 HSPA2P54652 639 aa28.62■■■□□ 2.17
YBX1-204ENST00000467957 ABCC3O15438 1527 aa28.6■■■□□ 2.17
YBX1-204ENST00000467957 PZPP20742 1482 aa28.59■■■□□ 2.17
YBX1-204ENST00000467957 RRBP1Q9P2E9 1410 aaKnown RBP28.59■■■□□ 2.17
YBX1-204ENST00000467957 PRDM15P57071 1507 aaPredicted RBP28.59■■■□□ 2.17
YBX1-204ENST00000467957 DEPDC5O75140 1603 aa28.58■■■□□ 2.17
YBX1-204ENST00000467957 ROCK1Q13464 1354 aa28.56■■■□□ 2.16
YBX1-204ENST00000467957 MYO3AQ8NEV4 1616 aa28.54■■■□□ 2.16
YBX1-204ENST00000467957 ANKRD50Q9ULJ7 1429 aa28.52■■■□□ 2.16
YBX1-204ENST00000467957 CEP152O94986 1710 aa28.52■■■□□ 2.16
YBX1-204ENST00000467957 ZNF142P52746 1687 aaPredicted RBP28.51■■■□□ 2.15
YBX1-204ENST00000467957 FBXO31Q5XUX0 539 aaPredicted RBP28.5■■■□□ 2.15
YBX1-204ENST00000467957 CAMSAP1Q5T5Y3 1602 aa28.49■■■□□ 2.15
YBX1-204ENST00000467957 VWDEQ8N2E2 1590 aa28.48■■■□□ 2.15
YBX1-204ENST00000467957 KANK1Q14678 1352 aa28.48■■■□□ 2.15
YBX1-204ENST00000467957 TNRQ92752 1358 aa28.48■■■□□ 2.15
YBX1-204ENST00000467957 CEP170BQ9Y4F5 1589 aaPredicted RBP28.47■■■□□ 2.15
YBX1-204ENST00000467957 ARHGAP31Q2M1Z3 1444 aa28.45■■■□□ 2.15
YBX1-204ENST00000467957 LMTK2Q8IWU2 1503 aa28.45■■■□□ 2.15
YBX1-204ENST00000467957 ITGAEP38570 1179 aa28.45■■■□□ 2.14
YBX1-204ENST00000467957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.45■■■□□ 2.148e-10■□□□□ 8.8
YBX1-204ENST00000467957 STRCQ7RTU9 1775 aa28.45■■■□□ 2.14
YBX1-204ENST00000467957 SPATA31D1Q6ZQQ2 1576 aa28.44■■■□□ 2.14
YBX1-204ENST00000467957 A2ML1A8K2U0 1454 aa28.43■■■□□ 2.14
YBX1-204ENST00000467957 ERVK-7P63135 1459 aa28.41■■■□□ 2.14
YBX1-204ENST00000467957 NLRP1Q9C000 1473 aa28.4■■■□□ 2.14
YBX1-204ENST00000467957 DMRT2Q9Y5R5 561 aa28.38■■■□□ 2.13
YBX1-204ENST00000467957 PLA2R1Q13018 1463 aa28.37■■■□□ 2.13
YBX1-204ENST00000467957 UNC13BO14795 1591 aa28.37■■■□□ 2.13
YBX1-204ENST00000467957 EFCAB6Q5THR3 1501 aa28.33■■■□□ 2.13
YBX1-204ENST00000467957 CFAP65Q6ZU64 1925 aaKnown RBP28.32■■■□□ 2.12
YBX1-204ENST00000467957 PTPRTO14522 1441 aa28.32■■■□□ 2.12
YBX1-204ENST00000467957 UGGT1Q9NYU2 1555 aa28.28■■■□□ 2.12
YBX1-204ENST00000467957 PKD2Q13563 968 aa28.28■■■□□ 2.12
YBX1-204ENST00000467957 TET3O43151 1660 aa28.28■■■□□ 2.12
YBX1-204ENST00000467957 RPRD2Q5VT52 1461 aaKnown RBP28.27■■■□□ 2.12
YBX1-204ENST00000467957 IQGAP3Q86VI3 1631 aa28.26■■■□□ 2.11
YBX1-204ENST00000467957 THEMISQ8N1K5 641 aaPredicted RBP28.26■■■□□ 2.11
YBX1-204ENST00000467957 NAIPQ13075 1403 aa28.26■■■□□ 2.11
YBX1-204ENST00000467957 GCC2Q8IWJ2 1684 aa28.25■■■□□ 2.11
YBX1-204ENST00000467957 NCKAP5LQ9HCH0 1330 aa28.24■■■□□ 2.11
YBX1-204ENST00000467957 NOS1P29475 1434 aa28.24■■■□□ 2.11
YBX1-204ENST00000467957 HFM1A2PYH4 1435 aa28.21■■■□□ 2.11
YBX1-204ENST00000467957 NUP155O75694 1391 aa28.21■■■□□ 2.11
YBX1-204ENST00000467957 UBR1Q8IWV7 1749 aa28.2■■■□□ 2.1
YBX1-204ENST00000467957 SYNMO15061 1565 aa28.2■■■□□ 2.1
YBX1-204ENST00000467957 POLR1AO95602 1720 aaPredicted RBP28.18■■■□□ 2.1
YBX1-204ENST00000467957 E9PCH4 1651 aa28.16■■■□□ 2.1
YBX1-204ENST00000467957 KDM5AP29375 1690 aaKnown RBP28.16■■■□□ 2.1
YBX1-204ENST00000467957 PIK3C2BO00750 1634 aa28.15■■■□□ 2.1
YBX1-204ENST00000467957 ANKLE2Q86XL3 938 aa28.15■■■□□ 2.1
YBX1-204ENST00000467957 SLC52A1Q9NWF4 448 aa28.14■■■□□ 2.1
YBX1-204ENST00000467957 NEURL4Q96JN8 1562 aa28.14■■■□□ 2.1
YBX1-204ENST00000467957 IDI1Q13907 227 aa28.13■■■□□ 2.09
YBX1-204ENST00000467957 MED14O60244 1454 aa28.11■■■□□ 2.09
YBX1-204ENST00000467957 ARHGAP23Q9P227 1491 aa28.1■■■□□ 2.09
YBX1-204ENST00000467957 SLIT1O75093 1534 aa28.1■■■□□ 2.09
YBX1-204ENST00000467957 CERKQ8TCT0 537 aa28.06■■■□□ 2.08
YBX1-204ENST00000467957 ADGRB3O60242 1522 aa28.05■■■□□ 2.08
YBX1-204ENST00000467957 LTBP4Q8N2S1 1624 aa28.05■■■□□ 2.08
YBX1-204ENST00000467957 STAG3Q9UJ98 1225 aa28.05■■■□□ 2.08
YBX1-204ENST00000467957 NPHP4O75161 1426 aaPredicted RBP28.04■■■□□ 2.08
YBX1-204ENST00000467957 TMEM2Q9UHN6 1383 aa28.03■■■□□ 2.08
YBX1-204ENST00000467957 SCAF11Q99590 1463 aaKnown RBP28.02■■■□□ 2.08
YBX1-204ENST00000467957 IQGAP1P46940 1657 aa28.01■■■□□ 2.07
YBX1-204ENST00000467957 LTKP29376 864 aa27.99■■■□□ 2.07
YBX1-204ENST00000467957 TXNDC2Q86VQ3 553 aa27.99■■■□□ 2.07
YBX1-204ENST00000467957 ZNF335Q9H4Z2 1342 aaPredicted RBP27.98■■■□□ 2.07
YBX1-204ENST00000467957 ILDR1Q86SU0 546 aaPredicted RBP27.98■■■□□ 2.07
YBX1-204ENST00000467957 EID1Q9Y6B2 187 aa27.98■■■□□ 2.07
YBX1-204ENST00000467957 TMEM131LA2VDJ0 1609 aa27.97■■■□□ 2.07
YBX1-204ENST00000467957 FBXO41Q8TF61 875 aa27.97■■■□□ 2.07
YBX1-204ENST00000467957 TRIM52Q96A61 297 aa27.97■■■□□ 2.07
YBX1-204ENST00000467957 SPHKAPQ2M3C7 1700 aa27.97■■■□□ 2.07
YBX1-204ENST00000467957 ACIN1Q9UKV3 1341 aaKnown RBP27.92■■■□□ 2.06
YBX1-204ENST00000467957 MYO5BQ9ULV0 1848 aa27.92■■■□□ 2.06
YBX1-204ENST00000467957 IQSEC2Q5JU85 1478 aa27.92■■■□□ 2.06
YBX1-204ENST00000467957 SETD5Q9C0A6 1442 aa27.91■■■□□ 2.06
YBX1-204ENST00000467957 SLC4A1APQ9BWU0 796 aaKnown RBP27.9■■■□□ 2.06
YBX1-204ENST00000467957 TRPM2O94759 1503 aa27.89■■■□□ 2.06
YBX1-204ENST00000467957 ZFYVE9O95405 1425 aa27.89■■■□□ 2.06
YBX1-204ENST00000467957 HDGFP51858 240 aaKnown RBP27.86■■■□□ 2.05
YBX1-204ENST00000467957 CPS1P31327 1500 aa27.86■■■□□ 2.05
YBX1-204ENST00000467957 RIMS2Q9UQ26 1411 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms