RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 GPATCH8Q9UKJ3 1502 aaKnown RBP17.34■□□□□ 0.37
PRPF3-203ENST00000467514 SHANK2Q9UPX8 1470 aa17.31■□□□□ 0.36
PRPF3-203ENST00000467514 KIAA1107Q9UPP5 1409 aa17.31■□□□□ 0.36
PRPF3-203ENST00000467514 TNRQ92752 1358 aa17.29■□□□□ 0.36
PRPF3-203ENST00000467514 MTUS2Q5JR59 1369 aa17.28■□□□□ 0.36
PRPF3-203ENST00000467514 ANKLE2Q86XL3 938 aa17.28■□□□□ 0.36
PRPF3-203ENST00000467514 NEURL4Q96JN8 1562 aa17.28■□□□□ 0.36
PRPF3-203ENST00000467514 KDM5DQ9BY66 1539 aa17.25■□□□□ 0.35
PRPF3-203ENST00000467514 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.25■□□□□ 0.35
PRPF3-203ENST00000467514 KIF3BO15066 747 aa17.24■□□□□ 0.35
PRPF3-203ENST00000467514 FAM135AQ9P2D6 1515 aa17.24■□□□□ 0.35
PRPF3-203ENST00000467514 FBXO31Q5XUX0 539 aaPredicted RBP17.23■□□□□ 0.35
PRPF3-203ENST00000467514 THEMISQ8N1K5 641 aaPredicted RBP17.23■□□□□ 0.35
PRPF3-203ENST00000467514 PZPP20742 1482 aa17.23■□□□□ 0.35
PRPF3-203ENST00000467514 WASHC2CQ9Y4E1 1318 aa17.22■□□□□ 0.35
PRPF3-203ENST00000467514 NPHP4O75161 1426 aaPredicted RBP17.22■□□□□ 0.35
PRPF3-203ENST00000467514 UGGT1Q9NYU2 1555 aa17.22■□□□□ 0.35
PRPF3-203ENST00000467514 IQGAP1P46940 1657 aa17.22■□□□□ 0.35
PRPF3-203ENST00000467514 VWDEQ8N2E2 1590 aa17.21■□□□□ 0.35
PRPF3-203ENST00000467514 DHX29Q7Z478 1369 aaKnown RBP17.2■□□□□ 0.34
PRPF3-203ENST00000467514 RNF17Q9BXT8 1623 aaKnown RBP17.2■□□□□ 0.34
PRPF3-203ENST00000467514 ZNF644Q9H582 1327 aaPredicted RBP17.2■□□□□ 0.34
PRPF3-203ENST00000467514 TIAM1Q13009 1591 aa17.19■□□□□ 0.34
PRPF3-203ENST00000467514 NLRP1Q9C000 1473 aa17.19■□□□□ 0.34
PRPF3-203ENST00000467514 DEPDC5O75140 1603 aa17.19■□□□□ 0.34
PRPF3-203ENST00000467514 RTEL1-TNFRSF6BF6WH68 1400 aa17.18■□□□□ 0.34
PRPF3-203ENST00000467514 VPS8Q8N3P4 1428 aa17.18■□□□□ 0.34
PRPF3-203ENST00000467514 SYNMO15061 1565 aa17.17■□□□□ 0.34
PRPF3-203ENST00000467514 EHBP1L1Q8N3D4 1523 aa17.16■□□□□ 0.34
PRPF3-203ENST00000467514 MIA2Q96PC5 1412 aa17.15■□□□□ 0.34
PRPF3-203ENST00000467514 CCDC141Q6ZP82 1450 aa17.15■□□□□ 0.34
PRPF3-203ENST00000467514 MED14O60244 1454 aa17.14■□□□□ 0.33
PRPF3-203ENST00000467514 MBD5Q9P267 1494 aa17.13■□□□□ 0.33
PRPF3-203ENST00000467514 ALKQ9UM73 1620 aa17.13■□□□□ 0.33
PRPF3-203ENST00000467514 LRRC7Q96NW7 1537 aa17.12■□□□□ 0.33
PRPF3-203ENST00000467514 STRCP1A6NGW2 1772 aa17.12■□□□□ 0.33
PRPF3-203ENST00000467514 CAMSAP2Q08AD1 1489 aa17.1■□□□□ 0.33
PRPF3-203ENST00000467514 CFAP65Q6ZU64 1925 aaKnown RBP17.08■□□□□ 0.33
PRPF3-203ENST00000467514 ZC3H13Q5T200 1668 aaKnown RBP17.08■□□□□ 0.32
PRPF3-203ENST00000467514 TSPY4P0CV99 314 aa17.08■□□□□ 0.32
PRPF3-203ENST00000467514 TSPY10P0CW01 314 aa17.08■□□□□ 0.32
PRPF3-203ENST00000467514 RSPH4AQ5TD94 716 aa17.06■□□□□ 0.32
PRPF3-203ENST00000467514 SCAF11Q99590 1463 aaKnown RBP17.04■□□□□ 0.32
PRPF3-203ENST00000467514 ABCC3O15438 1527 aa17.03■□□□□ 0.32
PRPF3-203ENST00000467514 CEP152O94986 1710 aa17.03■□□□□ 0.32
PRPF3-203ENST00000467514 UBR1Q8IWV7 1749 aa17.03■□□□□ 0.32
PRPF3-203ENST00000467514 ERVK-7P63135 1459 aa17.03■□□□□ 0.32
PRPF3-203ENST00000467514 NCOA2Q15596 1464 aa17.02■□□□□ 0.32
PRPF3-203ENST00000467514 EID1Q9Y6B2 187 aa17.01■□□□□ 0.31
PRPF3-203ENST00000467514 ARHGEF5Q12774 1597 aa17.01■□□□□ 0.31
PRPF3-203ENST00000467514 TXNDC2Q86VQ3 553 aa17■□□□□ 0.31
PRPF3-203ENST00000467514 RGS17Q9UGC6 210 aaPredicted RBP17■□□□□ 0.31
PRPF3-203ENST00000467514 STAG3Q9UJ98 1225 aa16.99■□□□□ 0.31
PRPF3-203ENST00000467514 EIF2AK4Q9P2K8 1649 aaKnown RBP16.99■□□□□ 0.31
PRPF3-203ENST00000467514 XIRP1Q702N8 1843 aaKnown RBP16.98■□□□□ 0.31
PRPF3-203ENST00000467514 SETD1AO15047 1707 aaKnown RBP16.96■□□□□ 0.31
PRPF3-203ENST00000467514 ROBO1Q9Y6N7 1651 aa16.95■□□□□ 0.3
PRPF3-203ENST00000467514 POTEAQ6S8J7 498 aa16.95■□□□□ 0.3
PRPF3-203ENST00000467514 MAP3K1Q13233 1512 aa16.95■□□□□ 0.3
PRPF3-203ENST00000467514 SLIT1O75093 1534 aa16.93■□□□□ 0.3
PRPF3-203ENST00000467514 LTKP29376 864 aa16.93■□□□□ 0.3
PRPF3-203ENST00000467514 FAM135BQ49AJ0 1406 aa16.93■□□□□ 0.3
PRPF3-203ENST00000467514 MAST1Q9Y2H9 1570 aa16.93■□□□□ 0.3
PRPF3-203ENST00000467514 TMEM94Q12767 1356 aa16.91■□□□□ 0.3
PRPF3-203ENST00000467514 BCANQ96GW7 911 aa16.91■□□□□ 0.3
PRPF3-203ENST00000467514 MROH1Q8NDA8 1641 aa16.91■□□□□ 0.3
PRPF3-203ENST00000467514 LRRC9Q6ZRR7 1453 aa16.91■□□□□ 0.3
PRPF3-203ENST00000467514 ARHGAP23Q9P227 1491 aa16.91■□□□□ 0.3
PRPF3-203ENST00000467514 PIK3C2BO00750 1634 aa16.9■□□□□ 0.3
PRPF3-203ENST00000467514 TRIM26Q12899 539 aaPredicted RBP16.9■□□□□ 0.3
PRPF3-203ENST00000467514 PROSER2Q86WR7 435 aaPredicted RBP16.9■□□□□ 0.3
PRPF3-203ENST00000467514 PPARGC1BQ86YN6 1023 aaKnown RBP16.89■□□□□ 0.29
PRPF3-203ENST00000467514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.89■□□□□ 0.293e-11■□□□□ 8.9
PRPF3-203ENST00000467514 PHLPP1O60346 1717 aa16.89■□□□□ 0.29
PRPF3-203ENST00000467514 DUOX2Q9NRD8 1548 aa16.89■□□□□ 0.29
PRPF3-203ENST00000467514 MEX3CQ5U5Q3 659 aaKnown RBP16.87■□□□□ 0.29
PRPF3-203ENST00000467514 RBM33Q96EV2 1170 aaKnown RBP16.87■□□□□ 0.29
PRPF3-203ENST00000467514 MSH6P52701 1360 aa16.87■□□□□ 0.29
PRPF3-203ENST00000467514 APLP2Q06481 763 aa16.86■□□□□ 0.29
PRPF3-203ENST00000467514 KANK1Q14678 1352 aa16.86■□□□□ 0.29
PRPF3-203ENST00000467514 TMEM2Q9UHN6 1383 aa16.86■□□□□ 0.29
PRPF3-203ENST00000467514 EFCAB6Q5THR3 1501 aa16.86■□□□□ 0.29
PRPF3-203ENST00000467514 SLC26A8Q96RN1 970 aa16.85■□□□□ 0.29
PRPF3-203ENST00000467514 PRDM15P57071 1507 aaPredicted RBP16.85■□□□□ 0.29
PRPF3-203ENST00000467514 KCNA6P17658 529 aa16.84■□□□□ 0.29
PRPF3-203ENST00000467514 KANK4Q5T7N3 995 aaPredicted RBP16.84■□□□□ 0.29
PRPF3-203ENST00000467514 ARHGAP31Q2M1Z3 1444 aa16.83■□□□□ 0.28
PRPF3-203ENST00000467514 KIF15Q9NS87 1388 aa16.83■□□□□ 0.28
PRPF3-203ENST00000467514 JCADQ9P266 1359 aa16.83■□□□□ 0.28
PRPF3-203ENST00000467514 NKTRP30414 1462 aaKnown RBP16.81■□□□□ 0.28
PRPF3-203ENST00000467514 MYOM3Q5VTT5 1437 aa16.81■□□□□ 0.28
PRPF3-203ENST00000467514 C14orf37Q86TY3 774 aa16.81■□□□□ 0.28
PRPF3-203ENST00000467514 TRIM52Q96A61 297 aa16.81■□□□□ 0.28
PRPF3-203ENST00000467514 PCGF6Q9BYE7 350 aa16.81■□□□□ 0.28
PRPF3-203ENST00000467514 KDM5AP29375 1690 aaKnown RBP16.81■□□□□ 0.28
PRPF3-203ENST00000467514 ERBINQ96RT1 1412 aa16.8■□□□□ 0.28
PRPF3-203ENST00000467514 RRP7BPQ9NSQ0 103 aa16.8■□□□□ 0.28
PRPF3-203ENST00000467514 CROCC2H7BZ55 1655 aa16.79■□□□□ 0.28
PRPF3-203ENST00000467514 SLAIN2Q9P270 581 aa16.78■□□□□ 0.28
PRPF3-203ENST00000467514 NWD1Q149M9 1564 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms