RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 MAGI2Q86UL8 1455 aa20.37■□□□□ 0.85
PRPF38B-204ENST00000467302 RBM19Q9Y4C8 960 aaKnown RBP20.35■□□□□ 0.85
PRPF38B-204ENST00000467302 NBPF8Q3BBV2 869 aa20.34■□□□□ 0.85
PRPF38B-204ENST00000467302 INO80Q9ULG1 1556 aaPredicted RBP20.34■□□□□ 0.85
PRPF38B-204ENST00000467302 CFAP74Q9C0B2 1584 aa20.34■□□□□ 0.85
PRPF38B-204ENST00000467302 SPATA31E1Q6ZUB1 1445 aa20.33■□□□□ 0.85
PRPF38B-204ENST00000467302 ADGRL1O94910 1474 aa20.32■□□□□ 0.84
PRPF38B-204ENST00000467302 SPAG9O60271 1321 aaKnown RBP20.32■□□□□ 0.84
PRPF38B-204ENST00000467302 CCDC184Q52MB2 194 aa20.31■□□□□ 0.84
PRPF38B-204ENST00000467302 PRKRIP1Q9H875 184 aaPredicted RBP20.31■□□□□ 0.84
PRPF38B-204ENST00000467302 ATP7AQ04656 1500 aa20.3■□□□□ 0.84
PRPF38B-204ENST00000467302 SCAPERQ9BY12 1400 aa20.26■□□□□ 0.83
PRPF38B-204ENST00000467302 ERICH6BQ5W0A0 696 aa20.26■□□□□ 0.83
PRPF38B-204ENST00000467302 DEPDC5O75140 1603 aa20.25■□□□□ 0.83
PRPF38B-204ENST00000467302 AFAP1Q8N556 730 aa20.25■□□□□ 0.83
PRPF38B-204ENST00000467302 KIF7Q2M1P5 1343 aa20.25■□□□□ 0.83
PRPF38B-204ENST00000467302 EIF2AK4Q9P2K8 1649 aaKnown RBP20.24■□□□□ 0.83
PRPF38B-204ENST00000467302 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.24■□□□□ 0.832e-6■□□□□ 11.2
PRPF38B-204ENST00000467302 POLR1AO95602 1720 aaPredicted RBP20.23■□□□□ 0.83
PRPF38B-204ENST00000467302 CD109Q6YHK3 1445 aa20.23■□□□□ 0.83
PRPF38B-204ENST00000467302 UHRF1BP1Q6BDS2 1440 aa20.22■□□□□ 0.83
PRPF38B-204ENST00000467302 ZNF518AQ6AHZ1 1483 aa20.22■□□□□ 0.83
PRPF38B-204ENST00000467302 CCDC144AA2RUR9 1427 aa20.21■□□□□ 0.83
PRPF38B-204ENST00000467302 ATP10AO60312 1499 aa20.2■□□□□ 0.82
PRPF38B-204ENST00000467302 ZBED9Q6R2W3 1325 aa20.2■□□□□ 0.82
PRPF38B-204ENST00000467302 IRX6P78412 446 aaPredicted RBP20.2■□□□□ 0.82
PRPF38B-204ENST00000467302 MRS2Q9HD23 443 aa20.2■□□□□ 0.82
PRPF38B-204ENST00000467302 RIMBP3CA6NJZ7 1639 aa20.2■□□□□ 0.82
PRPF38B-204ENST00000467302 RIMBP3BA6NNM3 1639 aa20.2■□□□□ 0.82
PRPF38B-204ENST00000467302 RIMBP3Q9UFD9 1639 aa20.2■□□□□ 0.82
PRPF38B-204ENST00000467302 KIDINS220Q9ULH0 1771 aa20.18■□□□□ 0.82
PRPF38B-204ENST00000467302 KDM5CP41229 1560 aa20.18■□□□□ 0.82
PRPF38B-204ENST00000467302 PLA2R1Q13018 1463 aa20.18■□□□□ 0.82
PRPF38B-204ENST00000467302 RALGAPBQ86X10 1494 aa20.18■□□□□ 0.82
PRPF38B-204ENST00000467302 FAM9BQ8IZU0 186 aa20.17■□□□□ 0.82
PRPF38B-204ENST00000467302 POGZQ7Z3K3 1410 aa20.16■□□□□ 0.82
PRPF38B-204ENST00000467302 NEO1Q92859 1461 aa20.15■□□□□ 0.82
PRPF38B-204ENST00000467302 VWDEQ8N2E2 1590 aa20.15■□□□□ 0.82
PRPF38B-204ENST00000467302 TET3O43151 1660 aa20.15■□□□□ 0.82
PRPF38B-204ENST00000467302 PRDM15P57071 1507 aaPredicted RBP20.15■□□□□ 0.82
PRPF38B-204ENST00000467302 ZNF326Q5BKZ1 582 aaKnown RBP20.15■□□□□ 0.82
PRPF38B-204ENST00000467302 E9PCH4 1651 aa20.14■□□□□ 0.82
PRPF38B-204ENST00000467302 DHX29Q7Z478 1369 aaKnown RBP20.14■□□□□ 0.82
PRPF38B-204ENST00000467302 PPP4R2Q9NY27 417 aa20.14■□□□□ 0.81
PRPF38B-204ENST00000467302 MAP3K4Q9Y6R4 1608 aa20.13■□□□□ 0.81
PRPF38B-204ENST00000467302 HECW2Q9P2P5 1572 aa20.13■□□□□ 0.81
PRPF38B-204ENST00000467302 GLI2P10070 1586 aa20.12■□□□□ 0.81
PRPF38B-204ENST00000467302 KANK1Q14678 1352 aa20.11■□□□□ 0.81
PRPF38B-204ENST00000467302 MROH1Q8NDA8 1641 aa20.11■□□□□ 0.81
PRPF38B-204ENST00000467302 MLH3Q9UHC1 1453 aa20.11■□□□□ 0.81
PRPF38B-204ENST00000467302 SPHKAPQ2M3C7 1700 aa20.1■□□□□ 0.81
PRPF38B-204ENST00000467302 MYT1LQ9UL68 1186 aa20.1■□□□□ 0.81
PRPF38B-204ENST00000467302 TRPM2O94759 1503 aa20.1■□□□□ 0.81
PRPF38B-204ENST00000467302 DCAF11Q8TEB1 546 aa20.1■□□□□ 0.81
PRPF38B-204ENST00000467302 FANCIQ9NVI1 1328 aa20.1■□□□□ 0.81
PRPF38B-204ENST00000467302 USP47Q96K76 1375 aa20.1■□□□□ 0.81
PRPF38B-204ENST00000467302 KDM2AQ9Y2K7 1162 aa20.09■□□□□ 0.81
PRPF38B-204ENST00000467302 RNF17Q9BXT8 1623 aaKnown RBP20.09■□□□□ 0.81
PRPF38B-204ENST00000467302 BCORL1Q5H9F3 1711 aa20.08■□□□□ 0.81
PRPF38B-204ENST00000467302 ARID4BQ4LE39 1312 aaPredicted RBP20.08■□□□□ 0.8
PRPF38B-204ENST00000467302 A2MP01023 1474 aa20.08■□□□□ 0.8
PRPF38B-204ENST00000467302 MSH5O43196 834 aa20.07■□□□□ 0.8
PRPF38B-204ENST00000467302 CYB5RLQ6IPT4 315 aa20.07■□□□□ 0.8
PRPF38B-204ENST00000467302 TRPM1Q7Z4N2 1603 aa20.06■□□□□ 0.8
PRPF38B-204ENST00000467302 CEP152O94986 1710 aa20.06■□□□□ 0.8
PRPF38B-204ENST00000467302 PTPRTO14522 1441 aa20.05■□□□□ 0.8
PRPF38B-204ENST00000467302 PRAG1Q86YV5 1406 aa20.05■□□□□ 0.8
PRPF38B-204ENST00000467302 KIF3BO15066 747 aa20.04■□□□□ 0.8
PRPF38B-204ENST00000467302 ABCA6Q8N139 1617 aa20.04■□□□□ 0.8
PRPF38B-204ENST00000467302 FRMPD1Q5SYB0 1578 aa20.04■□□□□ 0.8
PRPF38B-204ENST00000467302 LMTK2Q8IWU2 1503 aa20.03■□□□□ 0.8
PRPF38B-204ENST00000467302 RGL3Q3MIN7 710 aa20.03■□□□□ 0.8
PRPF38B-204ENST00000467302 RICTORQ6R327 1708 aa20.03■□□□□ 0.8
PRPF38B-204ENST00000467302 EFCAB6Q5THR3 1501 aa20.02■□□□□ 0.8
PRPF38B-204ENST00000467302 CARD11Q9BXL7 1154 aa20.02■□□□□ 0.8
PRPF38B-204ENST00000467302 SMG6Q86US8 1419 aaKnown RBP20.02■□□□□ 0.8
PRPF38B-204ENST00000467302 LAMC1P11047 1609 aa20.02■□□□□ 0.8
PRPF38B-204ENST00000467302 DIP2BQ9P265 1576 aa20.02■□□□□ 0.79
PRPF38B-204ENST00000467302 CLTCL1P53675 1640 aa20.01■□□□□ 0.79
PRPF38B-204ENST00000467302 NEURL4Q96JN8 1562 aa19.99■□□□□ 0.79
PRPF38B-204ENST00000467302 PPRC1Q5VV67 1664 aaKnown RBP19.99■□□□□ 0.79
PRPF38B-204ENST00000467302 ROCK2O75116 1388 aaKnown RBP19.98■□□□□ 0.79
PRPF38B-204ENST00000467302 B4GALNT3Q6L9W6 998 aa19.97■□□□□ 0.79
PRPF38B-204ENST00000467302 DIP2CQ9Y2E4 1556 aa19.97■□□□□ 0.79
PRPF38B-204ENST00000467302 RNF123Q5XPI4 1314 aa19.96■□□□□ 0.79
PRPF38B-204ENST00000467302 GPRASP1Q5JY77 1395 aa19.96■□□□□ 0.79
PRPF38B-204ENST00000467302 NUDCQ9Y266 331 aa19.94■□□□□ 0.78
PRPF38B-204ENST00000467302 MADDQ8WXG6 1647 aa19.93■□□□□ 0.78
PRPF38B-204ENST00000467302 PNISRQ8TF01 805 aaKnown RBP19.93■□□□□ 0.78
PRPF38B-204ENST00000467302 POLR3GLQ9BT43 218 aa19.92■□□□□ 0.78
PRPF38B-204ENST00000467302 ZMYM4Q5VZL5 1548 aa19.91■□□□□ 0.78
PRPF38B-204ENST00000467302 KIF1BO60333 1816 aa19.9■□□□□ 0.78
PRPF38B-204ENST00000467302 ST20-MTHFSA0A0A6YYL1 179 aa19.9■□□□□ 0.78
PRPF38B-204ENST00000467302 RAPGEF3O95398 923 aa19.9■□□□□ 0.78
PRPF38B-204ENST00000467302 STAC3Q96MF2 364 aa19.9■□□□□ 0.78
PRPF38B-204ENST00000467302 ABCC3O15438 1527 aa19.89■□□□□ 0.77
PRPF38B-204ENST00000467302 FAM69CQ0P6D2 419 aa19.88■□□□□ 0.77
PRPF38B-204ENST00000467302 NBPF1Q3BBV0 1214 aa19.88■□□□□ 0.77
PRPF38B-204ENST00000467302 ZC3H13Q5T200 1668 aaKnown RBP19.88■□□□□ 0.77
PRPF38B-204ENST00000467302 CAMSAP1Q5T5Y3 1602 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms