RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 MBD5Q9P267 1494 aa10.35□□□□□ -0.75
UBXN4-205ENST00000467065 MAP3K1Q13233 1512 aa10.34□□□□□ -0.75
UBXN4-205ENST00000467065 CEBPAP49715 358 aaPredicted RBP10.34□□□□□ -0.75
UBXN4-205ENST00000467065 A2MP01023 1474 aa10.34□□□□□ -0.75
UBXN4-205ENST00000467065 CCDC141Q6ZP82 1450 aa10.34□□□□□ -0.75
UBXN4-205ENST00000467065 ARHGEF5Q12774 1597 aa10.34□□□□□ -0.75
UBXN4-205ENST00000467065 HSPA2P54652 639 aa10.33□□□□□ -0.76
UBXN4-205ENST00000467065 STRCQ7RTU9 1775 aa10.32□□□□□ -0.76
UBXN4-205ENST00000467065 CROCC2H7BZ55 1655 aa10.32□□□□□ -0.76
UBXN4-205ENST00000467065 POLA2Q14181 598 aa10.31□□□□□ -0.76
UBXN4-205ENST00000467065 MYO3AQ8NEV4 1616 aa10.3□□□□□ -0.76
UBXN4-205ENST00000467065 KANK4Q5T7N3 995 aaPredicted RBP10.3□□□□□ -0.76
UBXN4-205ENST00000467065 UHRF1BP1Q6BDS2 1440 aa10.3□□□□□ -0.76
UBXN4-205ENST00000467065 CNTLNQ9NXG0 1405 aa10.3□□□□□ -0.76
UBXN4-205ENST00000467065 ZNF142P52746 1687 aaPredicted RBP10.29□□□□□ -0.76
UBXN4-205ENST00000467065 MYCNP04198 464 aaPredicted RBP10.29□□□□□ -0.76
UBXN4-205ENST00000467065 ESF1Q9H501 851 aaKnown RBP10.29□□□□□ -0.76
UBXN4-205ENST00000467065 RTEL1-TNFRSF6BF6WH68 1400 aa10.29□□□□□ -0.76
UBXN4-205ENST00000467065 MAST1Q9Y2H9 1570 aa10.29□□□□□ -0.76
UBXN4-205ENST00000467065 PTPN23Q9H3S7 1636 aa10.29□□□□□ -0.76
UBXN4-205ENST00000467065 MYOM3Q5VTT5 1437 aa10.28□□□□□ -0.76
UBXN4-205ENST00000467065 ILDR1Q86SU0 546 aaPredicted RBP10.27□□□□□ -0.77
UBXN4-205ENST00000467065 CEP152O94986 1710 aa10.27□□□□□ -0.77
UBXN4-205ENST00000467065 RNF17Q9BXT8 1623 aaKnown RBP10.25□□□□□ -0.77
UBXN4-205ENST00000467065 EIF2AK4Q9P2K8 1649 aaKnown RBP10.25□□□□□ -0.77
UBXN4-205ENST00000467065 MIA2Q96PC5 1412 aa10.25□□□□□ -0.77
UBXN4-205ENST00000467065 CFAP65Q6ZU64 1925 aaKnown RBP10.25□□□□□ -0.77
UBXN4-205ENST00000467065 GGT6Q6P531 493 aa10.25□□□□□ -0.77
UBXN4-205ENST00000467065 DNMT1P26358 1616 aaKnown RBP10.25□□□□□ -0.77
UBXN4-205ENST00000467065 DHX29Q7Z478 1369 aaKnown RBP10.25□□□□□ -0.77
UBXN4-205ENST00000467065 NPATQ14207 1427 aa10.24□□□□□ -0.77
UBXN4-205ENST00000467065 KDM5DQ9BY66 1539 aa10.24□□□□□ -0.77
UBXN4-205ENST00000467065 CEP170BQ9Y4F5 1589 aaPredicted RBP10.24□□□□□ -0.77
UBXN4-205ENST00000467065 ZC3H13Q5T200 1668 aaKnown RBP10.24□□□□□ -0.77
UBXN4-205ENST00000467065 ZMYM3Q14202 1370 aa10.24□□□□□ -0.77
UBXN4-205ENST00000467065 CAMSAP1Q5T5Y3 1602 aa10.23□□□□□ -0.77
UBXN4-205ENST00000467065 MROH1Q8NDA8 1641 aa10.23□□□□□ -0.77
UBXN4-205ENST00000467065 FAM135AQ9P2D6 1515 aa10.23□□□□□ -0.77
UBXN4-205ENST00000467065 PTPRKQ15262 1439 aa10.22□□□□□ -0.77
UBXN4-205ENST00000467065 POLR1AO95602 1720 aaPredicted RBP10.21□□□□□ -0.77
UBXN4-205ENST00000467065 KIF3BO15066 747 aa10.21□□□□□ -0.77
UBXN4-205ENST00000467065 TSPY4P0CV99 314 aa10.21□□□□□ -0.77
UBXN4-205ENST00000467065 TSPY10P0CW01 314 aa10.21□□□□□ -0.77
UBXN4-205ENST00000467065 RSPH4AQ5TD94 716 aa10.21□□□□□ -0.77
UBXN4-205ENST00000467065 FGD6Q6ZV73 1430 aa10.21□□□□□ -0.78
UBXN4-205ENST00000467065 TCOF1Q13428 1488 aaKnown RBP10.2□□□□□ -0.78
UBXN4-205ENST00000467065 NCOA1Q15788 1441 aa10.2□□□□□ -0.78
UBXN4-205ENST00000467065 SHANK2Q9UPX8 1470 aa10.2□□□□□ -0.78
UBXN4-205ENST00000467065 DUOX2Q9NRD8 1548 aa10.19□□□□□ -0.78
UBXN4-205ENST00000467065 ABCC5O15440 1437 aa10.19□□□□□ -0.78
UBXN4-205ENST00000467065 DEPDC5O75140 1603 aa10.18□□□□□ -0.78
UBXN4-205ENST00000467065 ABCC3O15438 1527 aa10.18□□□□□ -0.78
UBXN4-205ENST00000467065 PZPP20742 1482 aa10.18□□□□□ -0.78
UBXN4-205ENST00000467065 DAPK1P53355 1430 aa10.18□□□□□ -0.78
UBXN4-205ENST00000467065 PRDM15P57071 1507 aaPredicted RBP10.17□□□□□ -0.78
UBXN4-205ENST00000467065 A2ML1A8K2U0 1454 aa10.17□□□□□ -0.78
UBXN4-205ENST00000467065 FBXO41Q8TF61 875 aa10.16□□□□□ -0.78
UBXN4-205ENST00000467065 PTPRTO14522 1441 aa10.16□□□□□ -0.78
UBXN4-205ENST00000467065 KIF15Q9NS87 1388 aa10.15□□□□□ -0.78
UBXN4-205ENST00000467065 WASHC2CQ9Y4E1 1318 aa10.15□□□□□ -0.78
UBXN4-205ENST00000467065 SPATA31D1Q6ZQQ2 1576 aa10.15□□□□□ -0.78
UBXN4-205ENST00000467065 AKT1S1Q96B36 256 aa10.15□□□□□ -0.78
UBXN4-205ENST00000467065 PLA2R1Q13018 1463 aa10.15□□□□□ -0.78
UBXN4-205ENST00000467065 TNRQ92752 1358 aa10.14□□□□□ -0.79
UBXN4-205ENST00000467065 FBXO31Q5XUX0 539 aaPredicted RBP10.14□□□□□ -0.79
UBXN4-205ENST00000467065 ERBINQ96RT1 1412 aa10.14□□□□□ -0.79
UBXN4-205ENST00000467065 LTBP4Q8N2S1 1624 aa10.14□□□□□ -0.79
UBXN4-205ENST00000467065 NEURL4Q96JN8 1562 aa10.14□□□□□ -0.79
UBXN4-205ENST00000467065 UBR1Q8IWV7 1749 aa10.13□□□□□ -0.79
UBXN4-205ENST00000467065 CERKQ8TCT0 537 aa10.13□□□□□ -0.79
UBXN4-205ENST00000467065 SP7Q8TDD2 431 aaPredicted RBP10.13□□□□□ -0.79
UBXN4-205ENST00000467065 NCKAP5LQ9HCH0 1330 aa10.12□□□□□ -0.79
UBXN4-205ENST00000467065 ERVK-7P63135 1459 aa10.12□□□□□ -0.79
UBXN4-205ENST00000467065 RRP7BPQ9NSQ0 103 aa10.12□□□□□ -0.79
UBXN4-205ENST00000467065 UGGT1Q9NYU2 1555 aa10.12□□□□□ -0.79
UBXN4-205ENST00000467065 ADGRL2O95490 1459 aa10.11□□□□□ -0.79
UBXN4-205ENST00000467065 FAM50AQ14320 339 aaKnown RBP10.11□□□□□ -0.79
UBXN4-205ENST00000467065 CHIC2Q9UKJ5 165 aa10.11□□□□□ -0.79
UBXN4-205ENST00000467065 ATF5Q9Y2D1 282 aaPredicted RBP10.11□□□□□ -0.79
UBXN4-205ENST00000467065 NLRP1Q9C000 1473 aa10.1□□□□□ -0.79
UBXN4-205ENST00000467065 IQGAP1P46940 1657 aa10.1□□□□□ -0.79
UBXN4-205ENST00000467065 PIK3C2BO00750 1634 aa10.1□□□□□ -0.79
UBXN4-205ENST00000467065 ANKRD30AQ9BXX3 1397 aa10.1□□□□□ -0.79
UBXN4-205ENST00000467065 MYO5BQ9ULV0 1848 aa10.1□□□□□ -0.79
UBXN4-205ENST00000467065 VWDEQ8N2E2 1590 aa10.09□□□□□ -0.79
UBXN4-205ENST00000467065 GCC2Q8IWJ2 1684 aa10.09□□□□□ -0.79
UBXN4-205ENST00000467065 ZBTB12Q9Y330 459 aaPredicted RBP10.08□□□□□ -0.8
UBXN4-205ENST00000467065 UNC13BO14795 1591 aa10.08□□□□□ -0.8
UBXN4-205ENST00000467065 EFCAB6Q5THR3 1501 aa10.07□□□□□ -0.8
UBXN4-205ENST00000467065 STRCP1A6NGW2 1772 aa10.07□□□□□ -0.8
UBXN4-205ENST00000467065 TET3O43151 1660 aa10.07□□□□□ -0.8
UBXN4-205ENST00000467065 SYNMO15061 1565 aa10.07□□□□□ -0.8
UBXN4-205ENST00000467065 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.07□□□□□ -0.8
UBXN4-205ENST00000467065 PKD2Q13563 968 aa10.07□□□□□ -0.8
UBXN4-205ENST00000467065 PPARGC1BQ86YN6 1023 aaKnown RBP10.07□□□□□ -0.8
UBXN4-205ENST00000467065 LMTK2Q8IWU2 1503 aa10.07□□□□□ -0.8
UBXN4-205ENST00000467065 ZNF335Q9H4Z2 1342 aaPredicted RBP10.07□□□□□ -0.8
UBXN4-205ENST00000467065 KANK1Q14678 1352 aa10.06□□□□□ -0.8
UBXN4-205ENST00000467065 REM2Q8IYK8 340 aaPredicted RBP10.06□□□□□ -0.8
UBXN4-205ENST00000467065 ARHGAP31Q2M1Z3 1444 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 445.1 ms