RNA–Protein interactions for RNA: ENST00000467045.5

COL21A1-206, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 2

Gene COL21A1, Length 2,291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-206ENST00000467045 BCORL1Q5H9F3 1711 aa17.39■□□□□ 0.37
COL21A1-206ENST00000467045 EIF2AK4Q9P2K8 1649 aaKnown RBP17.38■□□□□ 0.37
COL21A1-206ENST00000467045 ESF1Q9H501 851 aaKnown RBP17.37■□□□□ 0.37
COL21A1-206ENST00000467045 SETD5Q9C0A6 1442 aa17.37■□□□□ 0.37
COL21A1-206ENST00000467045 WASHC2CQ9Y4E1 1318 aa17.35■□□□□ 0.37
COL21A1-206ENST00000467045 GCC2Q8IWJ2 1684 aa17.35■□□□□ 0.37
COL21A1-206ENST00000467045 PPP6R1Q9UPN7 881 aa17.35■□□□□ 0.37
COL21A1-206ENST00000467045 TRIM52Q96A61 297 aa17.33■□□□□ 0.37
COL21A1-206ENST00000467045 ADAMTSL3P82987 1691 aa17.33■□□□□ 0.37
COL21A1-206ENST00000467045 RNF17Q9BXT8 1623 aaKnown RBP17.33■□□□□ 0.36
COL21A1-206ENST00000467045 PLPPR3Q6T4P5 718 aa17.33■□□□□ 0.36
COL21A1-206ENST00000467045 RAB3GAP2Q9H2M9 1393 aa17.33■□□□□ 0.36
COL21A1-206ENST00000467045 KANK1Q14678 1352 aa17.32■□□□□ 0.36
COL21A1-206ENST00000467045 MROH1Q8NDA8 1641 aa17.32■□□□□ 0.36
COL21A1-206ENST00000467045 MADDQ8WXG6 1647 aa17.32■□□□□ 0.36
COL21A1-206ENST00000467045 NUP155O75694 1391 aa17.32■□□□□ 0.36
COL21A1-206ENST00000467045 DEPDC5O75140 1603 aa17.3■□□□□ 0.36
COL21A1-206ENST00000467045 CEBPAP49715 358 aaPredicted RBP17.3■□□□□ 0.36
COL21A1-206ENST00000467045 PRDM15P57071 1507 aaPredicted RBP17.29■□□□□ 0.36
COL21A1-206ENST00000467045 FER1L4A9Z1Z3 1794 aa17.28■□□□□ 0.36
COL21A1-206ENST00000467045 ZMYM3Q14202 1370 aa17.28■□□□□ 0.36
COL21A1-206ENST00000467045 CLTCQ00610 1675 aaKnown RBP17.27■□□□□ 0.36
COL21A1-206ENST00000467045 UNC13BO14795 1591 aa17.27■□□□□ 0.36
COL21A1-206ENST00000467045 KDM5DQ9BY66 1539 aa17.27■□□□□ 0.36
COL21A1-206ENST00000467045 CNTLNQ9NXG0 1405 aa17.27■□□□□ 0.36
COL21A1-206ENST00000467045 RIMS1Q86UR5 1692 aaKnown RBP17.27■□□□□ 0.36
COL21A1-206ENST00000467045 ABCC3O15438 1527 aa17.27■□□□□ 0.35
COL21A1-206ENST00000467045 SCAF1Q9H7N4 1312 aaKnown RBP17.26■□□□□ 0.35
COL21A1-206ENST00000467045 VWDEQ8N2E2 1590 aa17.25■□□□□ 0.35
COL21A1-206ENST00000467045 PTPRMP28827 1452 aa17.25■□□□□ 0.35
COL21A1-206ENST00000467045 CEP152O94986 1710 aa17.24■□□□□ 0.35
COL21A1-206ENST00000467045 FBXO31Q5XUX0 539 aaPredicted RBP17.23■□□□□ 0.35
COL21A1-206ENST00000467045 SLC4A1APQ9BWU0 796 aaKnown RBP17.23■□□□□ 0.35
COL21A1-206ENST00000467045 FAM135AQ9P2D6 1515 aa17.22■□□□□ 0.35
COL21A1-206ENST00000467045 ACIN1Q9UKV3 1341 aaKnown RBP17.21■□□□□ 0.35
COL21A1-206ENST00000467045 MPHOSPH9Q99550 1183 aa17.21■□□□□ 0.35
COL21A1-206ENST00000467045 IQGAP3Q86VI3 1631 aa17.21■□□□□ 0.35
COL21A1-206ENST00000467045 LMTK2Q8IWU2 1503 aa17.21■□□□□ 0.35
COL21A1-206ENST00000467045 ZC3H13Q5T200 1668 aaKnown RBP17.2■□□□□ 0.34
COL21A1-206ENST00000467045 PZPP20742 1482 aa17.2■□□□□ 0.34
COL21A1-206ENST00000467045 MROH2AA6NES4 1674 aa17.19■□□□□ 0.34
COL21A1-206ENST00000467045 CAMSAP1Q5T5Y3 1602 aa17.19■□□□□ 0.34
COL21A1-206ENST00000467045 PKD2Q13563 968 aa17.19■□□□□ 0.34
COL21A1-206ENST00000467045 C3P01024 1663 aa17.19■□□□□ 0.34
COL21A1-206ENST00000467045 NPATQ14207 1427 aa17.18■□□□□ 0.34
COL21A1-206ENST00000467045 FOXD1Q16676 465 aa17.17■□□□□ 0.34
COL21A1-206ENST00000467045 DIEXFQ68CQ4 756 aaKnown RBP17.17■□□□□ 0.34
COL21A1-206ENST00000467045 ARHGAP31Q2M1Z3 1444 aa17.17■□□□□ 0.34
COL21A1-206ENST00000467045 TET3O43151 1660 aa17.16■□□□□ 0.34
COL21A1-206ENST00000467045 EFCAB6Q5THR3 1501 aa17.16■□□□□ 0.34
COL21A1-206ENST00000467045 AEBP2Q6ZN18 517 aaPredicted RBP17.14■□□□□ 0.33
COL21A1-206ENST00000467045 CFAP65Q6ZU64 1925 aaKnown RBP17.13■□□□□ 0.33
COL21A1-206ENST00000467045 E9PCH4 1651 aa17.13■□□□□ 0.33
COL21A1-206ENST00000467045 ERVK-7P63135 1459 aa17.12■□□□□ 0.33
COL21A1-206ENST00000467045 RPRD2Q5VT52 1461 aaKnown RBP17.12■□□□□ 0.33
COL21A1-206ENST00000467045 TNRQ92752 1358 aa17.11■□□□□ 0.33
COL21A1-206ENST00000467045 PELP1Q8IZL8 1130 aaKnown RBP17.1■□□□□ 0.33
COL21A1-206ENST00000467045 NOS1P29475 1434 aa17.09■□□□□ 0.33
COL21A1-206ENST00000467045 SPATA31D1Q6ZQQ2 1576 aa17.09■□□□□ 0.33
COL21A1-206ENST00000467045 PREX1Q8TCU6 1659 aa17.09■□□□□ 0.33
COL21A1-206ENST00000467045 IDI1Q13907 227 aa17.07■□□□□ 0.32
COL21A1-206ENST00000467045 PTPRTO14522 1441 aa17.05■□□□□ 0.32
COL21A1-206ENST00000467045 PLA2R1Q13018 1463 aa17.05■□□□□ 0.32
COL21A1-206ENST00000467045 ZNF316A6NFI3 1004 aaPredicted RBP17.05■□□□□ 0.32
COL21A1-206ENST00000467045 SLC52A1Q9NWF4 448 aa17.05■□□□□ 0.32
COL21A1-206ENST00000467045 DHX57Q6P158 1386 aaKnown RBP17.05■□□□□ 0.32
COL21A1-206ENST00000467045 SYNMO15061 1565 aa17.05■□□□□ 0.32
COL21A1-206ENST00000467045 NEUROD1Q13562 356 aa17.04■□□□□ 0.32
COL21A1-206ENST00000467045 UHRF1BP1Q6BDS2 1440 aa17.03■□□□□ 0.32
COL21A1-206ENST00000467045 SETD1BQ9UPS6 1966 aaKnown RBP17.03■□□□□ 0.32
COL21A1-206ENST00000467045 UGGT1Q9NYU2 1555 aa17.03■□□□□ 0.32
COL21A1-206ENST00000467045 CHGAP10645 457 aaKnown RBP17.01■□□□□ 0.31
COL21A1-206ENST00000467045 STAG3Q9UJ98 1225 aa17.01■□□□□ 0.31
COL21A1-206ENST00000467045 SPHKAPQ2M3C7 1700 aa17.01■□□□□ 0.31
COL21A1-206ENST00000467045 ANKRD30BQ9BXX2 1392 aa17.01■□□□□ 0.31
COL21A1-206ENST00000467045 NLRP1Q9C000 1473 aa17.01■□□□□ 0.31
COL21A1-206ENST00000467045 MYO3AQ8NEV4 1616 aa17■□□□□ 0.31
COL21A1-206ENST00000467045 CENPBP07199 599 aaPredicted RBP17■□□□□ 0.31
COL21A1-206ENST00000467045 TRPM2O94759 1503 aa16.99■□□□□ 0.31
COL21A1-206ENST00000467045 HSPA2P54652 639 aa16.99■□□□□ 0.31
COL21A1-206ENST00000467045 A2ML1A8K2U0 1454 aa16.99■□□□□ 0.31
COL21A1-206ENST00000467045 LMTK3Q96Q04 1460 aa16.98■□□□□ 0.31
COL21A1-206ENST00000467045 CCDC144AA2RUR9 1427 aa16.97■□□□□ 0.31
COL21A1-206ENST00000467045 CEP170BQ9Y4F5 1589 aaPredicted RBP16.97■□□□□ 0.31
COL21A1-206ENST00000467045 THEMISQ8N1K5 641 aaPredicted RBP16.97■□□□□ 0.31
COL21A1-206ENST00000467045 PIK3C2BO00750 1634 aa16.96■□□□□ 0.31
COL21A1-206ENST00000467045 CLTCL1P53675 1640 aa16.96■□□□□ 0.31
COL21A1-206ENST00000467045 SIN3AQ96ST3 1273 aa16.95■□□□□ 0.3
COL21A1-206ENST00000467045 RGL3Q3MIN7 710 aa16.93■□□□□ 0.3
COL21A1-206ENST00000467045 ZNF326Q5BKZ1 582 aaKnown RBP16.93■□□□□ 0.3
COL21A1-206ENST00000467045 ZNF142P52746 1687 aaPredicted RBP16.92■□□□□ 0.3
COL21A1-206ENST00000467045 UBR1Q8IWV7 1749 aa16.91■□□□□ 0.3
COL21A1-206ENST00000467045 ADGRB3O60242 1522 aa16.91■□□□□ 0.3
COL21A1-206ENST00000467045 TMEM131LA2VDJ0 1609 aa16.91■□□□□ 0.3
COL21A1-206ENST00000467045 NUTM2DQ5VT03 806 aaPredicted RBP16.89■□□□□ 0.29
COL21A1-206ENST00000467045 NCKAP5LQ9HCH0 1330 aa16.89■□□□□ 0.29
COL21A1-206ENST00000467045 TMEM2Q9UHN6 1383 aa16.88■□□□□ 0.29
COL21A1-206ENST00000467045 TXNDC2Q86VQ3 553 aa16.88■□□□□ 0.29
COL21A1-206ENST00000467045 LTKP29376 864 aa16.87■□□□□ 0.29
COL21A1-206ENST00000467045 ANKLE2Q86XL3 938 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms