RNA–Protein interactions for RNA: ENST00000467041.1

SSR2-204, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 3

Gene SSR2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-204ENST00000467041 KDM5DQ9BY66 1539 aa35.08■■■■□ 3.21
SSR2-204ENST00000467041 DNMT1P26358 1616 aaKnown RBP35.06■■■■□ 3.2
SSR2-204ENST00000467041 STRCQ7RTU9 1775 aa35.05■■■■□ 3.2
SSR2-204ENST00000467041 CROCC2H7BZ55 1655 aa35.05■■■■□ 3.2
SSR2-204ENST00000467041 DMRT2Q9Y5R5 561 aa35.05■■■■□ 3.2
SSR2-204ENST00000467041 DUOX2Q9NRD8 1548 aa35.05■■■■□ 3.2
SSR2-204ENST00000467041 EIF2AK4Q9P2K8 1649 aaKnown RBP35.03■■■■□ 3.2
SSR2-204ENST00000467041 KIF15Q9NS87 1388 aa35.03■■■■□ 3.2
SSR2-204ENST00000467041 RNF17Q9BXT8 1623 aaKnown RBP35.03■■■■□ 3.2
SSR2-204ENST00000467041 RRP7BPQ9NSQ0 103 aa35.02■■■■□ 3.2
SSR2-204ENST00000467041 PZPP20742 1482 aa34.99■■■■□ 3.19
SSR2-204ENST00000467041 FBXO31Q5XUX0 539 aaPredicted RBP34.99■■■■□ 3.19
SSR2-204ENST00000467041 MYO3AQ8NEV4 1616 aa34.98■■■■□ 3.19
SSR2-204ENST00000467041 CHIC2Q9UKJ5 165 aa34.96■■■■□ 3.19
SSR2-204ENST00000467041 NCOA1Q15788 1441 aa34.96■■■■□ 3.19
SSR2-204ENST00000467041 FAM50AQ14320 339 aaKnown RBP34.95■■■■□ 3.19
SSR2-204ENST00000467041 ANKRD30AQ9BXX3 1397 aa34.94■■■■□ 3.18
SSR2-204ENST00000467041 ERBINQ96RT1 1412 aa34.94■■■■□ 3.18
SSR2-204ENST00000467041 ZNF142P52746 1687 aaPredicted RBP34.94■■■■□ 3.18
SSR2-204ENST00000467041 CEP170BQ9Y4F5 1589 aaPredicted RBP34.93■■■■□ 3.18
SSR2-204ENST00000467041 CAMSAP1Q5T5Y3 1602 aa34.92■■■■□ 3.18
SSR2-204ENST00000467041 MROH1Q8NDA8 1641 aa34.92■■■■□ 3.18
SSR2-204ENST00000467041 ABCC3O15438 1527 aa34.92■■■■□ 3.18
SSR2-204ENST00000467041 TNRQ92752 1358 aa34.92■■■■□ 3.18
SSR2-204ENST00000467041 PTPRTO14522 1441 aa34.91■■■■□ 3.18
SSR2-204ENST00000467041 ZC3H13Q5T200 1668 aaKnown RBP34.89■■■■□ 3.18
SSR2-204ENST00000467041 A2ML1A8K2U0 1454 aa34.88■■■■□ 3.17
SSR2-204ENST00000467041 FBXO41Q8TF61 875 aa34.87■■■■□ 3.17
SSR2-204ENST00000467041 PLA2R1Q13018 1463 aa34.84■■■■□ 3.17
SSR2-204ENST00000467041 ADGRL2O95490 1459 aa34.84■■■■□ 3.17
SSR2-204ENST00000467041 NCKAP5LQ9HCH0 1330 aa34.82■■■■□ 3.17
SSR2-204ENST00000467041 PPARGC1BQ86YN6 1023 aaKnown RBP34.82■■■■□ 3.16
SSR2-204ENST00000467041 PRDM15P57071 1507 aaPredicted RBP34.81■■■■□ 3.16
SSR2-204ENST00000467041 PKD2Q13563 968 aa34.81■■■■□ 3.16
SSR2-204ENST00000467041 CERKQ8TCT0 537 aa34.81■■■■□ 3.16
SSR2-204ENST00000467041 CEP152O94986 1710 aa34.79■■■■□ 3.16
SSR2-204ENST00000467041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.78■■■■□ 3.165e-8■□□□□ 8.5
SSR2-204ENST00000467041 DEPDC5O75140 1603 aa34.77■■■■□ 3.16
SSR2-204ENST00000467041 NLRP1Q9C000 1473 aa34.77■■■■□ 3.16
SSR2-204ENST00000467041 SPATA31D1Q6ZQQ2 1576 aa34.75■■■■□ 3.15
SSR2-204ENST00000467041 KANK1Q14678 1352 aa34.74■■■■□ 3.15
SSR2-204ENST00000467041 ERVK-7P63135 1459 aa34.73■■■■□ 3.15
SSR2-204ENST00000467041 ARHGAP31Q2M1Z3 1444 aa34.72■■■■□ 3.15
SSR2-204ENST00000467041 THEMISQ8N1K5 641 aaPredicted RBP34.71■■■■□ 3.15
SSR2-204ENST00000467041 ANKRD50Q9ULJ7 1429 aa34.68■■■■□ 3.14
SSR2-204ENST00000467041 CFAP65Q6ZU64 1925 aaKnown RBP34.67■■■■□ 3.14
SSR2-204ENST00000467041 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.67■■■■□ 3.14
SSR2-204ENST00000467041 UGGT1Q9NYU2 1555 aa34.66■■■■□ 3.14
SSR2-204ENST00000467041 VWDEQ8N2E2 1590 aa34.66■■■■□ 3.14
SSR2-204ENST00000467041 LMTK2Q8IWU2 1503 aa34.65■■■■□ 3.14
SSR2-204ENST00000467041 ROCK1Q13464 1354 aa34.62■■■■□ 3.13
SSR2-204ENST00000467041 LTBP4Q8N2S1 1624 aa34.62■■■■□ 3.13
SSR2-204ENST00000467041 ANKLE2Q86XL3 938 aa34.61■■■■□ 3.13
SSR2-204ENST00000467041 ITGAEP38570 1179 aa34.58■■■■□ 3.13
SSR2-204ENST00000467041 POLR1AO95602 1720 aaPredicted RBP34.55■■■■□ 3.12
SSR2-204ENST00000467041 ZNF335Q9H4Z2 1342 aaPredicted RBP34.55■■■■□ 3.12
SSR2-204ENST00000467041 NEURL4Q96JN8 1562 aa34.54■■■■□ 3.12
SSR2-204ENST00000467041 EFCAB6Q5THR3 1501 aa34.5■■■■□ 3.11
SSR2-204ENST00000467041 RRBP1Q9P2E9 1410 aaKnown RBP34.49■■■■□ 3.11
SSR2-204ENST00000467041 UBR1Q8IWV7 1749 aa34.49■■■■□ 3.11
SSR2-204ENST00000467041 MED14O60244 1454 aa34.48■■■■□ 3.11
SSR2-204ENST00000467041 NPHP4O75161 1426 aaPredicted RBP34.46■■■■□ 3.11
SSR2-204ENST00000467041 NOS1P29475 1434 aa34.46■■■■□ 3.11
SSR2-204ENST00000467041 IQSEC2Q5JU85 1478 aa34.45■■■■□ 3.1
SSR2-204ENST00000467041 UNC13BO14795 1591 aa34.45■■■■□ 3.1
SSR2-204ENST00000467041 IDI1Q13907 227 aa34.43■■■■□ 3.1
SSR2-204ENST00000467041 RPRD2Q5VT52 1461 aaKnown RBP34.42■■■■□ 3.1
SSR2-204ENST00000467041 PIK3C2BO00750 1634 aa34.41■■■■□ 3.1
SSR2-204ENST00000467041 SYNMO15061 1565 aa34.4■■■■□ 3.1
SSR2-204ENST00000467041 TET3O43151 1660 aa34.4■■■■□ 3.1
SSR2-204ENST00000467041 STAG3Q9UJ98 1225 aa34.39■■■■□ 3.1
SSR2-204ENST00000467041 ARHGAP23Q9P227 1491 aa34.39■■■■□ 3.1
SSR2-204ENST00000467041 SLC52A1Q9NWF4 448 aa34.38■■■■□ 3.09
SSR2-204ENST00000467041 SLIT1O75093 1534 aa34.38■■■■□ 3.09
SSR2-204ENST00000467041 LTKP29376 864 aa34.36■■■■□ 3.09
SSR2-204ENST00000467041 TXNDC2Q86VQ3 553 aa34.36■■■■□ 3.09
SSR2-204ENST00000467041 IQGAP1P46940 1657 aa34.35■■■■□ 3.09
SSR2-204ENST00000467041 SCAF11Q99590 1463 aaKnown RBP34.35■■■■□ 3.09
SSR2-204ENST00000467041 KDM5AP29375 1690 aaKnown RBP34.33■■■■□ 3.09
SSR2-204ENST00000467041 GCC2Q8IWJ2 1684 aa34.33■■■■□ 3.09
SSR2-204ENST00000467041 NUP155O75694 1391 aa34.33■■■■□ 3.09
SSR2-204ENST00000467041 TMEM2Q9UHN6 1383 aa34.33■■■■□ 3.09
SSR2-204ENST00000467041 EID1Q9Y6B2 187 aa34.32■■■■□ 3.08
SSR2-204ENST00000467041 IQGAP3Q86VI3 1631 aa34.31■■■■□ 3.08
SSR2-204ENST00000467041 CPS1P31327 1500 aa34.29■■■■□ 3.08
SSR2-204ENST00000467041 E9PCH4 1651 aa34.25■■■■□ 3.07
SSR2-204ENST00000467041 ADGRB3O60242 1522 aa34.25■■■■□ 3.07
SSR2-204ENST00000467041 NAIPQ13075 1403 aa34.22■■■■□ 3.07
SSR2-204ENST00000467041 UBAP1LF5GYI3 381 aa34.2■■■■□ 3.07
SSR2-204ENST00000467041 HFM1A2PYH4 1435 aa34.13■■■■□ 3.05
SSR2-204ENST00000467041 TMEM131LA2VDJ0 1609 aa34.12■■■■□ 3.05
SSR2-204ENST00000467041 STRCP1A6NGW2 1772 aa34.12■■■■□ 3.05
SSR2-204ENST00000467041 CHGAP10645 457 aaKnown RBP34.09■■■■□ 3.05
SSR2-204ENST00000467041 MYO5BQ9ULV0 1848 aa34.09■■■■□ 3.05
SSR2-204ENST00000467041 ZFYVE9O95405 1425 aa34.08■■■■□ 3.05
SSR2-204ENST00000467041 HDGFP51858 240 aaKnown RBP34.08■■■■□ 3.05
SSR2-204ENST00000467041 LRRC7Q96NW7 1537 aa34.07■■■■□ 3.04
SSR2-204ENST00000467041 RIMS2Q9UQ26 1411 aa34.05■■■■□ 3.04
SSR2-204ENST00000467041 TOM1O60784 492 aa34.05■■■■□ 3.04
SSR2-204ENST00000467041 SLC26A8Q96RN1 970 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms