RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 HRCP23327 699 aa24.44■■□□□ 1.5
HLA-C-205ENST00000466892 PRDM15P57071 1507 aaPredicted RBP24.43■■□□□ 1.5
HLA-C-205ENST00000466892 DEPDC5O75140 1603 aa24.43■■□□□ 1.5
HLA-C-205ENST00000466892 CNTLNQ9NXG0 1405 aa24.41■■□□□ 1.5
HLA-C-205ENST00000466892 KANK1Q14678 1352 aa24.41■■□□□ 1.5
HLA-C-205ENST00000466892 GGT6Q6P531 493 aa24.4■■□□□ 1.5
HLA-C-205ENST00000466892 KDM5DQ9BY66 1539 aa24.4■■□□□ 1.5
HLA-C-205ENST00000466892 UNC13BO14795 1591 aa24.38■■□□□ 1.49
HLA-C-205ENST00000466892 MROH1Q8NDA8 1641 aa24.38■■□□□ 1.49
HLA-C-205ENST00000466892 MLECQ14165 292 aa24.36■■□□□ 1.49
HLA-C-205ENST00000466892 ESF1Q9H501 851 aaKnown RBP24.36■■□□□ 1.49
HLA-C-205ENST00000466892 ADAMTSL3P82987 1691 aa24.36■■□□□ 1.49
HLA-C-205ENST00000466892 VWDEQ8N2E2 1590 aa24.35■■□□□ 1.49
HLA-C-205ENST00000466892 RAB3GAP2Q9H2M9 1393 aa24.35■■□□□ 1.49
HLA-C-205ENST00000466892 LMTK2Q8IWU2 1503 aa24.34■■□□□ 1.49
HLA-C-205ENST00000466892 WASHC2CQ9Y4E1 1318 aa24.34■■□□□ 1.49
HLA-C-205ENST00000466892 ZC3H13Q5T200 1668 aaKnown RBP24.34■■□□□ 1.49
HLA-C-205ENST00000466892 NUP155O75694 1391 aa24.31■■□□□ 1.48
HLA-C-205ENST00000466892 ABCC3O15438 1527 aa24.3■■□□□ 1.48
HLA-C-205ENST00000466892 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.29■■□□□ 1.48
HLA-C-205ENST00000466892 IQGAP3Q86VI3 1631 aa24.28■■□□□ 1.48
HLA-C-205ENST00000466892 ARHGAP31Q2M1Z3 1444 aa24.27■■□□□ 1.48
HLA-C-205ENST00000466892 MADDQ8WXG6 1647 aa24.27■■□□□ 1.48
HLA-C-205ENST00000466892 PCGF6Q9BYE7 350 aa24.26■■□□□ 1.47
HLA-C-205ENST00000466892 MROH2AA6NES4 1674 aa24.26■■□□□ 1.47
HLA-C-205ENST00000466892 FER1L4A9Z1Z3 1794 aa24.25■■□□□ 1.47
HLA-C-205ENST00000466892 KDM4FA0A1W2PPD8 638 aa24.24■■□□□ 1.47
HLA-C-205ENST00000466892 TRIM52Q96A61 297 aa24.24■■□□□ 1.47
HLA-C-205ENST00000466892 ZMYM3Q14202 1370 aa24.24■■□□□ 1.47
HLA-C-205ENST00000466892 RPRD2Q5VT52 1461 aaKnown RBP24.23■■□□□ 1.47
HLA-C-205ENST00000466892 EFCAB6Q5THR3 1501 aa24.21■■□□□ 1.47
HLA-C-205ENST00000466892 PZPP20742 1482 aa24.2■■□□□ 1.47
HLA-C-205ENST00000466892 PTPRMP28827 1452 aa24.2■■□□□ 1.47
HLA-C-205ENST00000466892 TET3O43151 1660 aa24.2■■□□□ 1.46
HLA-C-205ENST00000466892 CLTCQ00610 1675 aaKnown RBP24.2■■□□□ 1.46
HLA-C-205ENST00000466892 CAMSAP1Q5T5Y3 1602 aa24.18■■□□□ 1.46
HLA-C-205ENST00000466892 NPATQ14207 1427 aa24.18■■□□□ 1.46
HLA-C-205ENST00000466892 SLC4A1APQ9BWU0 796 aaKnown RBP24.17■■□□□ 1.46
HLA-C-205ENST00000466892 RIMS1Q86UR5 1692 aaKnown RBP24.17■■□□□ 1.46
HLA-C-205ENST00000466892 CEP152O94986 1710 aa24.15■■□□□ 1.46
HLA-C-205ENST00000466892 MPHOSPH9Q99550 1183 aa24.14■■□□□ 1.45
HLA-C-205ENST00000466892 SPATA31D1Q6ZQQ2 1576 aa24.1■■□□□ 1.45
HLA-C-205ENST00000466892 C3P01024 1663 aa24.1■■□□□ 1.45
HLA-C-205ENST00000466892 ERVK-7P63135 1459 aa24.09■■□□□ 1.45
HLA-C-205ENST00000466892 PKD2Q13563 968 aa24.09■■□□□ 1.45
HLA-C-205ENST00000466892 NOS1P29475 1434 aa24.09■■□□□ 1.45
HLA-C-205ENST00000466892 PTPRTO14522 1441 aa24.07■■□□□ 1.44
HLA-C-205ENST00000466892 E9PCH4 1651 aa24.06■■□□□ 1.44
HLA-C-205ENST00000466892 CEBPAP49715 358 aaPredicted RBP24.06■■□□□ 1.44
HLA-C-205ENST00000466892 TNRQ92752 1358 aa24.04■■□□□ 1.44
HLA-C-205ENST00000466892 FBXO31Q5XUX0 539 aaPredicted RBP24.03■■□□□ 1.44
HLA-C-205ENST00000466892 NLRP1Q9C000 1473 aa24.02■■□□□ 1.44
HLA-C-205ENST00000466892 SLC52A1Q9NWF4 448 aa24.02■■□□□ 1.44
HLA-C-205ENST00000466892 PREX1Q8TCU6 1659 aa24.02■■□□□ 1.44
HLA-C-205ENST00000466892 TRPM2O94759 1503 aa24■■□□□ 1.43
HLA-C-205ENST00000466892 DHX57Q6P158 1386 aaKnown RBP23.99■■□□□ 1.43
HLA-C-205ENST00000466892 SYNMO15061 1565 aa23.96■■□□□ 1.43
HLA-C-205ENST00000466892 PLA2R1Q13018 1463 aa23.96■■□□□ 1.43
HLA-C-205ENST00000466892 UHRF1BP1Q6BDS2 1440 aa23.95■■□□□ 1.42
HLA-C-205ENST00000466892 ANKRD30BQ9BXX2 1392 aa23.94■■□□□ 1.42
HLA-C-205ENST00000466892 SPHKAPQ2M3C7 1700 aa23.94■■□□□ 1.42
HLA-C-205ENST00000466892 PLPPR3Q6T4P5 718 aa23.94■■□□□ 1.42
HLA-C-205ENST00000466892 FOXD1Q16676 465 aa23.92■■□□□ 1.42
HLA-C-205ENST00000466892 A2ML1A8K2U0 1454 aa23.92■■□□□ 1.42
HLA-C-205ENST00000466892 CCDC144AA2RUR9 1427 aa23.92■■□□□ 1.42
HLA-C-205ENST00000466892 PIK3C2BO00750 1634 aa23.92■■□□□ 1.42
HLA-C-205ENST00000466892 MYO3AQ8NEV4 1616 aa23.92■■□□□ 1.42
HLA-C-205ENST00000466892 SETD1BQ9UPS6 1966 aaKnown RBP23.91■■□□□ 1.42
HLA-C-205ENST00000466892 CLSPNQ9HAW4 1339 aa23.9■■□□□ 1.42
HLA-C-205ENST00000466892 IDI1Q13907 227 aa23.89■■□□□ 1.41
HLA-C-205ENST00000466892 CEP170BQ9Y4F5 1589 aaPredicted RBP23.88■■□□□ 1.41
HLA-C-205ENST00000466892 KDM5AP29375 1690 aaKnown RBP23.88■■□□□ 1.41
HLA-C-205ENST00000466892 ZNF142P52746 1687 aaPredicted RBP23.88■■□□□ 1.41
HLA-C-205ENST00000466892 AEBP2Q6ZN18 517 aaPredicted RBP23.85■■□□□ 1.41
HLA-C-205ENST00000466892 NEURL4Q96JN8 1562 aa23.85■■□□□ 1.41
HLA-C-205ENST00000466892 UGGT1Q9NYU2 1555 aa23.85■■□□□ 1.41
HLA-C-205ENST00000466892 ADGRB3O60242 1522 aa23.84■■□□□ 1.41
HLA-C-205ENST00000466892 LMTK3Q96Q04 1460 aa23.83■■□□□ 1.41
HLA-C-205ENST00000466892 THEMISQ8N1K5 641 aaPredicted RBP23.83■■□□□ 1.41
HLA-C-205ENST00000466892 CLTCL1P53675 1640 aa23.83■■□□□ 1.41
HLA-C-205ENST00000466892 STAG3Q9UJ98 1225 aa23.81■■□□□ 1.4
HLA-C-205ENST00000466892 TMEM131LA2VDJ0 1609 aa23.78■■□□□ 1.4
HLA-C-205ENST00000466892 SPATA31E1Q6ZUB1 1445 aa23.77■■□□□ 1.4
HLA-C-205ENST00000466892 UBR1Q8IWV7 1749 aa23.76■■□□□ 1.39
HLA-C-205ENST00000466892 RPGRIP1LQ68CZ1 1315 aa23.76■■□□□ 1.39
HLA-C-205ENST00000466892 CFAP65Q6ZU64 1925 aaKnown RBP23.76■■□□□ 1.39
HLA-C-205ENST00000466892 SLIT1O75093 1534 aa23.75■■□□□ 1.39
HLA-C-205ENST00000466892 HDGFP51858 240 aaKnown RBP23.75■■□□□ 1.39
HLA-C-205ENST00000466892 CCER1Q8TC90 406 aaPredicted RBP23.75■■□□□ 1.39
HLA-C-205ENST00000466892 TMEM2Q9UHN6 1383 aa23.75■■□□□ 1.39
HLA-C-205ENST00000466892 ARHGAP23Q9P227 1491 aa23.75■■□□□ 1.39
HLA-C-205ENST00000466892 CHGAP10645 457 aaKnown RBP23.73■■□□□ 1.39
HLA-C-205ENST00000466892 STAC3Q96MF2 364 aa23.71■■□□□ 1.39
HLA-C-205ENST00000466892 KIF1BO60333 1816 aa23.7■■□□□ 1.39
HLA-C-205ENST00000466892 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.7■■□□□ 1.38
HLA-C-205ENST00000466892 ZFYVE9O95405 1425 aa23.68■■□□□ 1.38
HLA-C-205ENST00000466892 EID1Q9Y6B2 187 aa23.68■■□□□ 1.38
HLA-C-205ENST00000466892 ZNF326Q5BKZ1 582 aaKnown RBP23.67■■□□□ 1.38
HLA-C-205ENST00000466892 ANKLE2Q86XL3 938 aa23.67■■□□□ 1.38
HLA-C-205ENST00000466892 RIMS2Q9UQ26 1411 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms