RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 RIMS1Q86UR5 1692 aaKnown RBP21.05■□□□□ 0.96
UBA3-209ENST00000466763 FER1L4A9Z1Z3 1794 aa21.05■□□□□ 0.96
UBA3-209ENST00000466763 NCOA1Q15788 1441 aa21.04■□□□□ 0.96
UBA3-209ENST00000466763 DUOX2Q9NRD8 1548 aa21.04■□□□□ 0.96
UBA3-209ENST00000466763 ADGRL2O95490 1459 aa21.01■□□□□ 0.95
UBA3-209ENST00000466763 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.99■□□□□ 0.95
UBA3-209ENST00000466763 PTPRMP28827 1452 aa20.99■□□□□ 0.95
UBA3-209ENST00000466763 ROCK1Q13464 1354 aa20.97■□□□□ 0.95
UBA3-209ENST00000466763 ERBINQ96RT1 1412 aa20.97■□□□□ 0.95
UBA3-209ENST00000466763 CEBPAP49715 358 aaPredicted RBP20.97■□□□□ 0.95
UBA3-209ENST00000466763 WASHC2CQ9Y4E1 1318 aa20.96■□□□□ 0.95
UBA3-209ENST00000466763 EIF2AK4Q9P2K8 1649 aaKnown RBP20.96■□□□□ 0.95
UBA3-209ENST00000466763 ANKRD50Q9ULJ7 1429 aa20.95■□□□□ 0.95
UBA3-209ENST00000466763 CNTLNQ9NXG0 1405 aa20.94■□□□□ 0.94
UBA3-209ENST00000466763 CLTCQ00610 1675 aaKnown RBP20.93■□□□□ 0.94
UBA3-209ENST00000466763 ZMYM3Q14202 1370 aa20.9■□□□□ 0.94
UBA3-209ENST00000466763 RNF17Q9BXT8 1623 aaKnown RBP20.89■□□□□ 0.94
UBA3-209ENST00000466763 KANK1Q14678 1352 aa20.89■□□□□ 0.93
UBA3-209ENST00000466763 KDM5DQ9BY66 1539 aa20.88■□□□□ 0.93
UBA3-209ENST00000466763 C3P01024 1663 aa20.86■□□□□ 0.93
UBA3-209ENST00000466763 MROH2AA6NES4 1674 aa20.85■□□□□ 0.93
UBA3-209ENST00000466763 MROH1Q8NDA8 1641 aa20.85■□□□□ 0.93
UBA3-209ENST00000466763 NAIPQ13075 1403 aa20.84■□□□□ 0.93
UBA3-209ENST00000466763 CEP152O94986 1710 aa20.84■□□□□ 0.93
UBA3-209ENST00000466763 ABCC3O15438 1527 aa20.83■□□□□ 0.92
UBA3-209ENST00000466763 PRDM15P57071 1507 aaPredicted RBP20.82■□□□□ 0.92
UBA3-209ENST00000466763 FAM135AQ9P2D6 1515 aa20.82■□□□□ 0.92
UBA3-209ENST00000466763 DEPDC5O75140 1603 aa20.82■□□□□ 0.92
UBA3-209ENST00000466763 HFM1A2PYH4 1435 aa20.81■□□□□ 0.92
UBA3-209ENST00000466763 CFAP65Q6ZU64 1925 aaKnown RBP20.8■□□□□ 0.92
UBA3-209ENST00000466763 GCC2Q8IWJ2 1684 aa20.8■□□□□ 0.92
UBA3-209ENST00000466763 FBXO31Q5XUX0 539 aaPredicted RBP20.8■□□□□ 0.92
UBA3-209ENST00000466763 TRIM52Q96A61 297 aa20.8■□□□□ 0.92
UBA3-209ENST00000466763 ZC3H13Q5T200 1668 aaKnown RBP20.8■□□□□ 0.92
UBA3-209ENST00000466763 SETD1BQ9UPS6 1966 aaKnown RBP20.78■□□□□ 0.92
UBA3-209ENST00000466763 NUP155O75694 1391 aa20.78■□□□□ 0.92
UBA3-209ENST00000466763 CAMSAP1Q5T5Y3 1602 aa20.76■□□□□ 0.91
UBA3-209ENST00000466763 UNC13BO14795 1591 aa20.76■□□□□ 0.91
UBA3-209ENST00000466763 PZPP20742 1482 aa20.75■□□□□ 0.91
UBA3-209ENST00000466763 VWDEQ8N2E2 1590 aa20.73■□□□□ 0.91
UBA3-209ENST00000466763 NPATQ14207 1427 aa20.73■□□□□ 0.91
UBA3-209ENST00000466763 UHRF1BP1Q6BDS2 1440 aa20.72■□□□□ 0.91
UBA3-209ENST00000466763 SETD5Q9C0A6 1442 aa20.72■□□□□ 0.91
UBA3-209ENST00000466763 TNRQ92752 1358 aa20.72■□□□□ 0.91
UBA3-209ENST00000466763 LMTK2Q8IWU2 1503 aa20.71■□□□□ 0.91
UBA3-209ENST00000466763 PREX1Q8TCU6 1659 aa20.7■□□□□ 0.91
UBA3-209ENST00000466763 HSPA2P54652 639 aa20.69■□□□□ 0.9
UBA3-209ENST00000466763 ARHGAP31Q2M1Z3 1444 aa20.69■□□□□ 0.9
UBA3-209ENST00000466763 IQGAP3Q86VI3 1631 aa20.68■□□□□ 0.9
UBA3-209ENST00000466763 TET3O43151 1660 aa20.67■□□□□ 0.9
UBA3-209ENST00000466763 TRIM26Q12899 539 aaPredicted RBP20.67■□□□□ 0.9
UBA3-209ENST00000466763 ERVK-7P63135 1459 aa20.67■□□□□ 0.9
UBA3-209ENST00000466763 LMTK3Q96Q04 1460 aa20.67■□□□□ 0.9
UBA3-209ENST00000466763 EFCAB6Q5THR3 1501 aa20.67■□□□□ 0.9
UBA3-209ENST00000466763 RAB3GAP2Q9H2M9 1393 aa20.65■□□□□ 0.9
UBA3-209ENST00000466763 SLC4A1APQ9BWU0 796 aaKnown RBP20.65■□□□□ 0.9
UBA3-209ENST00000466763 MYO3AQ8NEV4 1616 aa20.64■□□□□ 0.89
UBA3-209ENST00000466763 SPATA31D1Q6ZQQ2 1576 aa20.63■□□□□ 0.89
UBA3-209ENST00000466763 PKD2Q13563 968 aa20.61■□□□□ 0.89
UBA3-209ENST00000466763 E9PCH4 1651 aa20.61■□□□□ 0.89
UBA3-209ENST00000466763 STAG3Q9UJ98 1225 aa20.6■□□□□ 0.89
UBA3-209ENST00000466763 RPRD2Q5VT52 1461 aaKnown RBP20.6■□□□□ 0.89
UBA3-209ENST00000466763 ACIN1Q9UKV3 1341 aaKnown RBP20.59■□□□□ 0.89
UBA3-209ENST00000466763 CEP170BQ9Y4F5 1589 aaPredicted RBP20.59■□□□□ 0.89
UBA3-209ENST00000466763 A2ML1A8K2U0 1454 aa20.58■□□□□ 0.89
UBA3-209ENST00000466763 NLRP1Q9C000 1473 aa20.58■□□□□ 0.89
UBA3-209ENST00000466763 MAPK8IP2Q13387 824 aaPredicted RBP20.58■□□□□ 0.89
UBA3-209ENST00000466763 MPHOSPH9Q99550 1183 aa20.57■□□□□ 0.88
UBA3-209ENST00000466763 NOS1P29475 1434 aa20.56■□□□□ 0.88
UBA3-209ENST00000466763 IDI1Q13907 227 aa20.56■□□□□ 0.88
UBA3-209ENST00000466763 ZNF142P52746 1687 aaPredicted RBP20.55■□□□□ 0.88
UBA3-209ENST00000466763 CHGAP10645 457 aaKnown RBP20.55■□□□□ 0.88
UBA3-209ENST00000466763 THEMISQ8N1K5 641 aaPredicted RBP20.55■□□□□ 0.88
UBA3-209ENST00000466763 SYNMO15061 1565 aa20.55■□□□□ 0.88
UBA3-209ENST00000466763 SLC52A1Q9NWF4 448 aa20.54■□□□□ 0.88
UBA3-209ENST00000466763 DMRT2Q9Y5R5 561 aa20.53■□□□□ 0.88
UBA3-209ENST00000466763 UGGT1Q9NYU2 1555 aa20.53■□□□□ 0.88
UBA3-209ENST00000466763 HRCP23327 699 aa20.52■□□□□ 0.88
UBA3-209ENST00000466763 SCAF1Q9H7N4 1312 aaKnown RBP20.5■□□□□ 0.87
UBA3-209ENST00000466763 NCKAP5LQ9HCH0 1330 aa20.5■□□□□ 0.87
UBA3-209ENST00000466763 SPHKAPQ2M3C7 1700 aa20.5■□□□□ 0.87
UBA3-209ENST00000466763 PIK3C2BO00750 1634 aa20.49■□□□□ 0.87
UBA3-209ENST00000466763 UBR1Q8IWV7 1749 aa20.47■□□□□ 0.87
UBA3-209ENST00000466763 ANKLE2Q86XL3 938 aa20.46■□□□□ 0.87
UBA3-209ENST00000466763 PTPRTO14522 1441 aa20.45■□□□□ 0.86
UBA3-209ENST00000466763 PCGF6Q9BYE7 350 aa20.45■□□□□ 0.86
UBA3-209ENST00000466763 STRCQ7RTU9 1775 aa20.44■□□□□ 0.86
UBA3-209ENST00000466763 PLA2R1Q13018 1463 aa20.43■□□□□ 0.86
UBA3-209ENST00000466763 TXNDC2Q86VQ3 553 aa20.42■□□□□ 0.86
UBA3-209ENST00000466763 EID1Q9Y6B2 187 aa20.42■□□□□ 0.86
UBA3-209ENST00000466763 ADGRB3O60242 1522 aa20.42■□□□□ 0.86
UBA3-209ENST00000466763 TRPM2O94759 1503 aa20.42■□□□□ 0.86
UBA3-209ENST00000466763 ZNF326Q5BKZ1 582 aaKnown RBP20.41■□□□□ 0.86
UBA3-209ENST00000466763 MYO5BQ9ULV0 1848 aa20.41■□□□□ 0.86
UBA3-209ENST00000466763 CLTCL1P53675 1640 aa20.39■□□□□ 0.86
UBA3-209ENST00000466763 TMEM2Q9UHN6 1383 aa20.38■□□□□ 0.85
UBA3-209ENST00000466763 TMEM131LA2VDJ0 1609 aa20.38■□□□□ 0.85
UBA3-209ENST00000466763 CCDC144AA2RUR9 1427 aa20.37■□□□□ 0.85
UBA3-209ENST00000466763 POLR1AO95602 1720 aaPredicted RBP20.37■□□□□ 0.85
UBA3-209ENST00000466763 PPP1R15AO75807 674 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms