RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 TCOF1Q13428 1488 aaKnown RBP25.99■■□□□ 1.75
SDHB-203ENST00000466613 SHANK2Q9UPX8 1470 aa25.99■■□□□ 1.75
SDHB-203ENST00000466613 RNF17Q9BXT8 1623 aaKnown RBP25.99■■□□□ 1.75
SDHB-203ENST00000466613 ZNF142P52746 1687 aaPredicted RBP25.98■■□□□ 1.75
SDHB-203ENST00000466613 DNMT1P26358 1616 aaKnown RBP25.98■■□□□ 1.75
SDHB-203ENST00000466613 ABCC5O15440 1437 aa25.96■■□□□ 1.75
SDHB-203ENST00000466613 DUOX2Q9NRD8 1548 aa25.94■■□□□ 1.74
SDHB-203ENST00000466613 DAPK1P53355 1430 aa25.94■■□□□ 1.74
SDHB-203ENST00000466613 CEP170BQ9Y4F5 1589 aaPredicted RBP25.93■■□□□ 1.74
SDHB-203ENST00000466613 ZC3H13Q5T200 1668 aaKnown RBP25.93■■□□□ 1.74
SDHB-203ENST00000466613 WASHC2CQ9Y4E1 1318 aa25.91■■□□□ 1.74
SDHB-203ENST00000466613 CAMSAP1Q5T5Y3 1602 aa25.91■■□□□ 1.74
SDHB-203ENST00000466613 PZPP20742 1482 aa25.91■■□□□ 1.74
SDHB-203ENST00000466613 DMRT2Q9Y5R5 561 aa25.9■■□□□ 1.74
SDHB-203ENST00000466613 NCOA1Q15788 1441 aa25.89■■□□□ 1.74
SDHB-203ENST00000466613 MROH1Q8NDA8 1641 aa25.89■■□□□ 1.74
SDHB-203ENST00000466613 KIF15Q9NS87 1388 aa25.88■■□□□ 1.73
SDHB-203ENST00000466613 ABCC3O15438 1527 aa25.87■■□□□ 1.73
SDHB-203ENST00000466613 PTPRTO14522 1441 aa25.86■■□□□ 1.73
SDHB-203ENST00000466613 ERBINQ96RT1 1412 aa25.85■■□□□ 1.73
SDHB-203ENST00000466613 CEP152O94986 1710 aa25.84■■□□□ 1.73
SDHB-203ENST00000466613 A2ML1A8K2U0 1454 aa25.84■■□□□ 1.73
SDHB-203ENST00000466613 PLA2R1Q13018 1463 aa25.83■■□□□ 1.73
SDHB-203ENST00000466613 TNRQ92752 1358 aa25.82■■□□□ 1.72
SDHB-203ENST00000466613 FBXO31Q5XUX0 539 aaPredicted RBP25.82■■□□□ 1.72
SDHB-203ENST00000466613 FBXO41Q8TF61 875 aa25.82■■□□□ 1.72
SDHB-203ENST00000466613 RRP7BPQ9NSQ0 103 aa25.81■■□□□ 1.72
SDHB-203ENST00000466613 PRDM15P57071 1507 aaPredicted RBP25.81■■□□□ 1.72
SDHB-203ENST00000466613 DEPDC5O75140 1603 aa25.8■■□□□ 1.72
SDHB-203ENST00000466613 ANKRD30AQ9BXX3 1397 aa25.79■■□□□ 1.72
SDHB-203ENST00000466613 ADGRL2O95490 1459 aa25.77■■□□□ 1.72
SDHB-203ENST00000466613 FAM50AQ14320 339 aaKnown RBP25.76■■□□□ 1.71
SDHB-203ENST00000466613 CHIC2Q9UKJ5 165 aa25.76■■□□□ 1.71
SDHB-203ENST00000466613 SPATA31D1Q6ZQQ2 1576 aa25.76■■□□□ 1.71
SDHB-203ENST00000466613 CERKQ8TCT0 537 aa25.75■■□□□ 1.71
SDHB-203ENST00000466613 NLRP1Q9C000 1473 aa25.74■■□□□ 1.71
SDHB-203ENST00000466613 NCKAP5LQ9HCH0 1330 aa25.73■■□□□ 1.71
SDHB-203ENST00000466613 CFAP65Q6ZU64 1925 aaKnown RBP25.73■■□□□ 1.71
SDHB-203ENST00000466613 POLR1AO95602 1720 aaPredicted RBP25.72■■□□□ 1.71
SDHB-203ENST00000466613 PKD2Q13563 968 aa25.72■■□□□ 1.71
SDHB-203ENST00000466613 ERVK-7P63135 1459 aa25.72■■□□□ 1.71
SDHB-203ENST00000466613 UGGT1Q9NYU2 1555 aa25.69■■□□□ 1.7
SDHB-203ENST00000466613 LTBP4Q8N2S1 1624 aa25.68■■□□□ 1.7
SDHB-203ENST00000466613 ARHGAP31Q2M1Z3 1444 aa25.68■■□□□ 1.7
SDHB-203ENST00000466613 KANK1Q14678 1352 aa25.67■■□□□ 1.7
SDHB-203ENST00000466613 VWDEQ8N2E2 1590 aa25.66■■□□□ 1.7
SDHB-203ENST00000466613 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.65■■□□□ 1.7
SDHB-203ENST00000466613 LMTK2Q8IWU2 1503 aa25.64■■□□□ 1.7
SDHB-203ENST00000466613 NEURL4Q96JN8 1562 aa25.64■■□□□ 1.69
SDHB-203ENST00000466613 THEMISQ8N1K5 641 aaPredicted RBP25.62■■□□□ 1.69
SDHB-203ENST00000466613 ANKRD50Q9ULJ7 1429 aa25.62■■□□□ 1.69
SDHB-203ENST00000466613 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.61■■□□□ 1.692e-7■■■■■ 28.8
SDHB-203ENST00000466613 UBR1Q8IWV7 1749 aa25.6■■□□□ 1.69
SDHB-203ENST00000466613 PPARGC1BQ86YN6 1023 aaKnown RBP25.6■■□□□ 1.69
SDHB-203ENST00000466613 EFCAB6Q5THR3 1501 aa25.58■■□□□ 1.68
SDHB-203ENST00000466613 ROCK1Q13464 1354 aa25.56■■□□□ 1.68
SDHB-203ENST00000466613 IQSEC2Q5JU85 1478 aa25.56■■□□□ 1.68
SDHB-203ENST00000466613 ANKLE2Q86XL3 938 aa25.56■■□□□ 1.68
SDHB-203ENST00000466613 ZNF335Q9H4Z2 1342 aaPredicted RBP25.55■■□□□ 1.68
SDHB-203ENST00000466613 UNC13BO14795 1591 aa25.54■■□□□ 1.68
SDHB-203ENST00000466613 MED14O60244 1454 aa25.53■■□□□ 1.68
SDHB-203ENST00000466613 PIK3C2BO00750 1634 aa25.52■■□□□ 1.68
SDHB-203ENST00000466613 IQGAP1P46940 1657 aa25.52■■□□□ 1.68
SDHB-203ENST00000466613 TET3O43151 1660 aa25.5■■□□□ 1.67
SDHB-203ENST00000466613 NPHP4O75161 1426 aaPredicted RBP25.5■■□□□ 1.67
SDHB-203ENST00000466613 KDM5AP29375 1690 aaKnown RBP25.49■■□□□ 1.67
SDHB-203ENST00000466613 SYNMO15061 1565 aa25.49■■□□□ 1.67
SDHB-203ENST00000466613 GCC2Q8IWJ2 1684 aa25.48■■□□□ 1.67
SDHB-203ENST00000466613 RPRD2Q5VT52 1461 aaKnown RBP25.47■■□□□ 1.67
SDHB-203ENST00000466613 NOS1P29475 1434 aa25.47■■□□□ 1.67
SDHB-203ENST00000466613 ITGAEP38570 1179 aa25.47■■□□□ 1.67
SDHB-203ENST00000466613 SLIT1O75093 1534 aa25.47■■□□□ 1.67
SDHB-203ENST00000466613 RRBP1Q9P2E9 1410 aaKnown RBP25.46■■□□□ 1.67
SDHB-203ENST00000466613 ARHGAP23Q9P227 1491 aa25.46■■□□□ 1.67
SDHB-203ENST00000466613 SCAF11Q99590 1463 aaKnown RBP25.43■■□□□ 1.66
SDHB-203ENST00000466613 IQGAP3Q86VI3 1631 aa25.43■■□□□ 1.66
SDHB-203ENST00000466613 CPS1P31327 1500 aa25.42■■□□□ 1.66
SDHB-203ENST00000466613 IDI1Q13907 227 aa25.4■■□□□ 1.66
SDHB-203ENST00000466613 E9PCH4 1651 aa25.39■■□□□ 1.66
SDHB-203ENST00000466613 ADGRB3O60242 1522 aa25.39■■□□□ 1.66
SDHB-203ENST00000466613 STAG3Q9UJ98 1225 aa25.38■■□□□ 1.65
SDHB-203ENST00000466613 TMEM2Q9UHN6 1383 aa25.37■■□□□ 1.65
SDHB-203ENST00000466613 LTKP29376 864 aa25.36■■□□□ 1.65
SDHB-203ENST00000466613 SLC52A1Q9NWF4 448 aa25.36■■□□□ 1.65
SDHB-203ENST00000466613 TXNDC2Q86VQ3 553 aa25.35■■□□□ 1.65
SDHB-203ENST00000466613 STRCP1A6NGW2 1772 aa25.35■■□□□ 1.65
SDHB-203ENST00000466613 EID1Q9Y6B2 187 aa25.34■■□□□ 1.65
SDHB-203ENST00000466613 MYO5BQ9ULV0 1848 aa25.33■■□□□ 1.65
SDHB-203ENST00000466613 NUP155O75694 1391 aa25.32■■□□□ 1.64
SDHB-203ENST00000466613 UBAP1LF5GYI3 381 aa25.29■■□□□ 1.64
SDHB-203ENST00000466613 TMEM131LA2VDJ0 1609 aa25.28■■□□□ 1.64
SDHB-203ENST00000466613 NAIPQ13075 1403 aa25.26■■□□□ 1.63
SDHB-203ENST00000466613 LRRC7Q96NW7 1537 aa25.23■■□□□ 1.63
SDHB-203ENST00000466613 SPHKAPQ2M3C7 1700 aa25.23■■□□□ 1.63
SDHB-203ENST00000466613 ZFYVE9O95405 1425 aa25.21■■□□□ 1.63
SDHB-203ENST00000466613 HFM1A2PYH4 1435 aa25.2■■□□□ 1.62
SDHB-203ENST00000466613 RIMS2Q9UQ26 1411 aa25.18■■□□□ 1.62
SDHB-203ENST00000466613 TOM1O60784 492 aa25.17■■□□□ 1.62
SDHB-203ENST00000466613 XIRP1Q702N8 1843 aaKnown RBP25.16■■□□□ 1.62
SDHB-203ENST00000466613 ALKQ9UM73 1620 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms