RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 PZPP20742 1482 aa17.76■□□□□ 0.43
VPS16-206ENST00000466415 COL17A1Q9UMD9 1497 aaPredicted RBP17.76■□□□□ 0.43
VPS16-206ENST00000466415 MPHOSPH9Q99550 1183 aa17.76■□□□□ 0.43
VPS16-206ENST00000466415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.76■□□□□ 0.43
VPS16-206ENST00000466415 ARHGEF40Q8TER5 1519 aa17.76■□□□□ 0.43
VPS16-206ENST00000466415 DEPDC5O75140 1603 aa17.74■□□□□ 0.43
VPS16-206ENST00000466415 KIF3BO15066 747 aa17.74■□□□□ 0.43
VPS16-206ENST00000466415 KANK1Q14678 1352 aa17.74■□□□□ 0.43
VPS16-206ENST00000466415 FAM135AQ9P2D6 1515 aa17.73■□□□□ 0.43
VPS16-206ENST00000466415 IQGAP3Q86VI3 1631 aa17.73■□□□□ 0.43
VPS16-206ENST00000466415 ATP10AO60312 1499 aa17.73■□□□□ 0.43
VPS16-206ENST00000466415 RNF17Q9BXT8 1623 aaKnown RBP17.71■□□□□ 0.43
VPS16-206ENST00000466415 PRDM15P57071 1507 aaPredicted RBP17.71■□□□□ 0.43
VPS16-206ENST00000466415 REREQ9P2R6 1566 aa17.7■□□□□ 0.42
VPS16-206ENST00000466415 BCORL1Q5H9F3 1711 aa17.7■□□□□ 0.42
VPS16-206ENST00000466415 PKD2Q13563 968 aa17.67■□□□□ 0.42
VPS16-206ENST00000466415 MROH1Q8NDA8 1641 aa17.67■□□□□ 0.42
VPS16-206ENST00000466415 FOXD1Q16676 465 aa17.65■□□□□ 0.42
VPS16-206ENST00000466415 AGLP35573 1532 aa17.64■□□□□ 0.41
VPS16-206ENST00000466415 GGT6Q6P531 493 aa17.64■□□□□ 0.41
VPS16-206ENST00000466415 VWDEQ8N2E2 1590 aa17.64■□□□□ 0.41
VPS16-206ENST00000466415 TET3O43151 1660 aa17.64■□□□□ 0.41
VPS16-206ENST00000466415 NEUROD1Q13562 356 aa17.63■□□□□ 0.41
VPS16-206ENST00000466415 SIN3AQ96ST3 1273 aa17.61■□□□□ 0.41
VPS16-206ENST00000466415 ANKRD30BQ9BXX2 1392 aa17.61■□□□□ 0.41
VPS16-206ENST00000466415 LMTK2Q8IWU2 1503 aa17.61■□□□□ 0.41
VPS16-206ENST00000466415 CEP152O94986 1710 aa17.61■□□□□ 0.41
VPS16-206ENST00000466415 ZC3H13Q5T200 1668 aaKnown RBP17.6■□□□□ 0.41
VPS16-206ENST00000466415 EFCAB6Q5THR3 1501 aa17.59■□□□□ 0.41
VPS16-206ENST00000466415 ABCC3O15438 1527 aa17.58■□□□□ 0.41
VPS16-206ENST00000466415 TONSLQ96HA7 1378 aa17.58■□□□□ 0.4
VPS16-206ENST00000466415 WASHC2CQ9Y4E1 1318 aa17.58■□□□□ 0.4
VPS16-206ENST00000466415 ARID4BQ4LE39 1312 aaPredicted RBP17.57■□□□□ 0.4
VPS16-206ENST00000466415 E9PCH4 1651 aa17.57■□□□□ 0.4
VPS16-206ENST00000466415 SIGLEC1Q9BZZ2 1709 aa17.55■□□□□ 0.4
VPS16-206ENST00000466415 CAMSAP1Q5T5Y3 1602 aa17.55■□□□□ 0.4
VPS16-206ENST00000466415 TIMELESSQ9UNS1 1208 aa17.54■□□□□ 0.4
VPS16-206ENST00000466415 RPRD2Q5VT52 1461 aaKnown RBP17.54■□□□□ 0.4
VPS16-206ENST00000466415 MLECQ14165 292 aa17.53■□□□□ 0.4
VPS16-206ENST00000466415 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
VPS16-206ENST00000466415 CCDC144AA2RUR9 1427 aa17.53■□□□□ 0.4
VPS16-206ENST00000466415 ESF1Q9H501 851 aaKnown RBP17.52■□□□□ 0.4
VPS16-206ENST00000466415 SPHKAPQ2M3C7 1700 aa17.52■□□□□ 0.39
VPS16-206ENST00000466415 TRPM2O94759 1503 aa17.51■□□□□ 0.39
VPS16-206ENST00000466415 CLTCQ00610 1675 aaKnown RBP17.48■□□□□ 0.39
VPS16-206ENST00000466415 NPATQ14207 1427 aa17.48■□□□□ 0.39
VPS16-206ENST00000466415 PLA2R1Q13018 1463 aa17.48■□□□□ 0.39
VPS16-206ENST00000466415 PTPRTO14522 1441 aa17.47■□□□□ 0.39
VPS16-206ENST00000466415 ARHGAP31Q2M1Z3 1444 aa17.47■□□□□ 0.39
VPS16-206ENST00000466415 CNTLNQ9NXG0 1405 aa17.45■□□□□ 0.38
VPS16-206ENST00000466415 CLTCL1P53675 1640 aa17.43■□□□□ 0.38
VPS16-206ENST00000466415 PREX1Q8TCU6 1659 aa17.41■□□□□ 0.38
VPS16-206ENST00000466415 NOS1P29475 1434 aa17.4■□□□□ 0.38
VPS16-206ENST00000466415 L3MBTL2Q969R5 705 aa17.4■□□□□ 0.38
VPS16-206ENST00000466415 ERVK-7P63135 1459 aa17.39■□□□□ 0.37
VPS16-206ENST00000466415 FER1L4A9Z1Z3 1794 aa17.39■□□□□ 0.37
VPS16-206ENST00000466415 MROH2AA6NES4 1674 aa17.39■□□□□ 0.37
VPS16-206ENST00000466415 UGGT1Q9NYU2 1555 aa17.38■□□□□ 0.37
VPS16-206ENST00000466415 PPP1R15AO75807 674 aaPredicted RBP17.38■□□□□ 0.37
VPS16-206ENST00000466415 SYNMO15061 1565 aa17.37■□□□□ 0.37
VPS16-206ENST00000466415 ZMYM3Q14202 1370 aa17.36■□□□□ 0.37
VPS16-206ENST00000466415 KIF1BO60333 1816 aa17.35■□□□□ 0.37
VPS16-206ENST00000466415 RGL3Q3MIN7 710 aa17.35■□□□□ 0.37
VPS16-206ENST00000466415 SPATA31D1Q6ZQQ2 1576 aa17.35■□□□□ 0.37
VPS16-206ENST00000466415 NEURL4Q96JN8 1562 aa17.35■□□□□ 0.37
VPS16-206ENST00000466415 PIK3C2BO00750 1634 aa17.34■□□□□ 0.37
VPS16-206ENST00000466415 CHGAP10645 457 aaKnown RBP17.34■□□□□ 0.37
VPS16-206ENST00000466415 CFAP65Q6ZU64 1925 aaKnown RBP17.34■□□□□ 0.37
VPS16-206ENST00000466415 SPATA31E1Q6ZUB1 1445 aa17.34■□□□□ 0.37
VPS16-206ENST00000466415 SLC52A1Q9NWF4 448 aa17.33■□□□□ 0.36
VPS16-206ENST00000466415 ADGRB3O60242 1522 aa17.32■□□□□ 0.36
VPS16-206ENST00000466415 FBXO31Q5XUX0 539 aaPredicted RBP17.32■□□□□ 0.36
VPS16-206ENST00000466415 MADDQ8WXG6 1647 aa17.32■□□□□ 0.36
VPS16-206ENST00000466415 ZNF326Q5BKZ1 582 aaKnown RBP17.31■□□□□ 0.36
VPS16-206ENST00000466415 DCAF11Q8TEB1 546 aa17.31■□□□□ 0.36
VPS16-206ENST00000466415 KDM2AQ9Y2K7 1162 aa17.3■□□□□ 0.36
VPS16-206ENST00000466415 RIMS1Q86UR5 1692 aaKnown RBP17.29■□□□□ 0.36
VPS16-206ENST00000466415 C3P01024 1663 aa17.29■□□□□ 0.36
VPS16-206ENST00000466415 TNRQ92752 1358 aa17.28■□□□□ 0.36
VPS16-206ENST00000466415 ADAMTSL3P82987 1691 aa17.28■□□□□ 0.36
VPS16-206ENST00000466415 UHRF1BP1Q6BDS2 1440 aa17.28■□□□□ 0.36
VPS16-206ENST00000466415 STAG3Q9UJ98 1225 aa17.27■□□□□ 0.36
VPS16-206ENST00000466415 IDI1Q13907 227 aa17.26■□□□□ 0.35
VPS16-206ENST00000466415 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
VPS16-206ENST00000466415 PRAG1Q86YV5 1406 aa17.24■□□□□ 0.35
VPS16-206ENST00000466415 NBPF8Q3BBV2 869 aa17.24■□□□□ 0.35
VPS16-206ENST00000466415 STAC3Q96MF2 364 aa17.24■□□□□ 0.35
VPS16-206ENST00000466415 MYOM2P54296 1465 aa17.24■□□□□ 0.35
VPS16-206ENST00000466415 TMEM131LA2VDJ0 1609 aa17.23■□□□□ 0.35
VPS16-206ENST00000466415 CEBPAP49715 358 aaPredicted RBP17.23■□□□□ 0.35
VPS16-206ENST00000466415 RALGAPBQ86X10 1494 aa17.23■□□□□ 0.35
VPS16-206ENST00000466415 RPGRIP1LQ68CZ1 1315 aa17.22■□□□□ 0.35
VPS16-206ENST00000466415 IFT172Q9UG01 1749 aa17.22■□□□□ 0.35
VPS16-206ENST00000466415 NLRP1Q9C000 1473 aa17.21■□□□□ 0.35
VPS16-206ENST00000466415 PPLO60437 1756 aa17.2■□□□□ 0.34
VPS16-206ENST00000466415 NEXMIFQ5QGS0 1516 aa17.19■□□□□ 0.34
VPS16-206ENST00000466415 TRPM1Q7Z4N2 1603 aa17.18■□□□□ 0.34
VPS16-206ENST00000466415 ROCK2O75116 1388 aaKnown RBP17.18■□□□□ 0.34
VPS16-206ENST00000466415 ZNF316A6NFI3 1004 aaPredicted RBP17.18■□□□□ 0.34
VPS16-206ENST00000466415 A2ML1A8K2U0 1454 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms