RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 ERICH6BQ5W0A0 696 aa9.54□□□□□ -0.88
CDHR3-204ENST00000466351 WASHC2AQ641Q2 1341 aa9.54□□□□□ -0.88
CDHR3-204ENST00000466351 TRPM1Q7Z4N2 1603 aa9.53□□□□□ -0.88
CDHR3-204ENST00000466351 ABCC1P33527 1531 aa9.53□□□□□ -0.88
CDHR3-204ENST00000466351 SYCP2Q9BX26 1530 aa9.53□□□□□ -0.88
CDHR3-204ENST00000466351 ZNF644Q9H582 1327 aaPredicted RBP9.53□□□□□ -0.88
CDHR3-204ENST00000466351 TSPY4P0CV99 314 aa9.52□□□□□ -0.89
CDHR3-204ENST00000466351 TSPY10P0CW01 314 aa9.52□□□□□ -0.89
CDHR3-204ENST00000466351 DEPDC5O75140 1603 aa9.52□□□□□ -0.89
CDHR3-204ENST00000466351 ARHGAP5Q13017 1502 aa9.51□□□□□ -0.89
CDHR3-204ENST00000466351 ZMYM4Q5VZL5 1548 aa9.51□□□□□ -0.89
CDHR3-204ENST00000466351 RNF17Q9BXT8 1623 aaKnown RBP9.51□□□□□ -0.89
CDHR3-204ENST00000466351 BCORL1Q5H9F3 1711 aa9.51□□□□□ -0.89
CDHR3-204ENST00000466351 RTEL1-TNFRSF6BF6WH68 1400 aa9.5□□□□□ -0.89
CDHR3-204ENST00000466351 NEFLP07196 543 aa9.49□□□□□ -0.89
CDHR3-204ENST00000466351 NUP155O75694 1391 aa9.49□□□□□ -0.89
CDHR3-204ENST00000466351 GPRASP1Q5JY77 1395 aa9.49□□□□□ -0.89
CDHR3-204ENST00000466351 ABCA9Q8IUA7 1624 aa9.49□□□□□ -0.89
CDHR3-204ENST00000466351 USP47Q96K76 1375 aa9.49□□□□□ -0.89
CDHR3-204ENST00000466351 PLCH2O75038 1416 aa9.48□□□□□ -0.89
CDHR3-204ENST00000466351 CEP152O94986 1710 aa9.48□□□□□ -0.89
CDHR3-204ENST00000466351 KIAA1210Q9ULL0 1709 aa9.48□□□□□ -0.89
CDHR3-204ENST00000466351 PRDM15P57071 1507 aaPredicted RBP9.47□□□□□ -0.89
CDHR3-204ENST00000466351 INO80Q9ULG1 1556 aaPredicted RBP9.47□□□□□ -0.89
CDHR3-204ENST00000466351 FBLN2P98095 1184 aa9.47□□□□□ -0.89
CDHR3-204ENST00000466351 STAC3Q96MF2 364 aa9.47□□□□□ -0.89
CDHR3-204ENST00000466351 TET3O43151 1660 aa9.47□□□□□ -0.89
CDHR3-204ENST00000466351 INSRP06213 1382 aa9.47□□□□□ -0.89
CDHR3-204ENST00000466351 SPHKAPQ2M3C7 1700 aa9.46□□□□□ -0.89
CDHR3-204ENST00000466351 PKD2Q13563 968 aa9.46□□□□□ -0.9
CDHR3-204ENST00000466351 NBPF8Q3BBV2 869 aa9.46□□□□□ -0.9
CDHR3-204ENST00000466351 PRKRIP1Q9H875 184 aaPredicted RBP9.46□□□□□ -0.9
CDHR3-204ENST00000466351 KIF7Q2M1P5 1343 aa9.46□□□□□ -0.9
CDHR3-204ENST00000466351 CCDC144AA2RUR9 1427 aa9.46□□□□□ -0.9
CDHR3-204ENST00000466351 ZFYVE16Q7Z3T8 1539 aa9.46□□□□□ -0.9
CDHR3-204ENST00000466351 CFAP74Q9C0B2 1584 aa9.46□□□□□ -0.9
CDHR3-204ENST00000466351 ZBED9Q6R2W3 1325 aa9.45□□□□□ -0.9
CDHR3-204ENST00000466351 DHX29Q7Z478 1369 aaKnown RBP9.45□□□□□ -0.9
CDHR3-204ENST00000466351 PRAG1Q86YV5 1406 aa9.45□□□□□ -0.9
CDHR3-204ENST00000466351 TRPM2O94759 1503 aa9.45□□□□□ -0.9
CDHR3-204ENST00000466351 VWDEQ8N2E2 1590 aa9.45□□□□□ -0.9
CDHR3-204ENST00000466351 KCNH8Q96L42 1107 aa9.44□□□□□ -0.9
CDHR3-204ENST00000466351 ARID3CA6NKF2 412 aa9.43□□□□□ -0.9
CDHR3-204ENST00000466351 IQGAP1P46940 1657 aa9.42□□□□□ -0.9
CDHR3-204ENST00000466351 ERCC6L2Q5T890 1561 aa9.42□□□□□ -0.9
CDHR3-204ENST00000466351 WASHC2CQ9Y4E1 1318 aa9.42□□□□□ -0.9
CDHR3-204ENST00000466351 ZNF777Q9ULD5 760 aaPredicted RBP9.42□□□□□ -0.9
CDHR3-204ENST00000466351 COL17A1Q9UMD9 1497 aaPredicted RBP9.41□□□□□ -0.9
CDHR3-204ENST00000466351 A2MP01023 1474 aa9.4□□□□□ -0.9
CDHR3-204ENST00000466351 HIRIP3Q9BW71 556 aaPredicted RBP9.4□□□□□ -0.9
CDHR3-204ENST00000466351 MADDQ8WXG6 1647 aa9.4□□□□□ -0.9
CDHR3-204ENST00000466351 ATP7AQ04656 1500 aa9.4□□□□□ -0.91
CDHR3-204ENST00000466351 PLA2R1Q13018 1463 aa9.4□□□□□ -0.91
CDHR3-204ENST00000466351 BRD4O60885 1362 aaPredicted RBP9.39□□□□□ -0.91
CDHR3-204ENST00000466351 EFCAB2Q5VUJ9 269 aa9.39□□□□□ -0.91
CDHR3-204ENST00000466351 RNF39Q9H2S5 420 aa9.39□□□□□ -0.91
CDHR3-204ENST00000466351 PTPRTO14522 1441 aa9.39□□□□□ -0.91
CDHR3-204ENST00000466351 LMTK2Q8IWU2 1503 aa9.38□□□□□ -0.91
CDHR3-204ENST00000466351 IFT172Q9UG01 1749 aa9.38□□□□□ -0.91
CDHR3-204ENST00000466351 SMG6Q86US8 1419 aaKnown RBP9.38□□□□□ -0.91
CDHR3-204ENST00000466351 SCAPERQ9BY12 1400 aa9.38□□□□□ -0.91
CDHR3-204ENST00000466351 C11orf95C9JLR9 678 aaPredicted RBP9.37□□□□□ -0.91
CDHR3-204ENST00000466351 HNRNPUQ00839 825 aaKnown RBP eCLIP9.37□□□□□ -0.91
CDHR3-204ENST00000466351 RALBP1Q15311 655 aa9.37□□□□□ -0.91
CDHR3-204ENST00000466351 KIF1BO60333 1816 aa9.37□□□□□ -0.91
CDHR3-204ENST00000466351 SYNMO15061 1565 aa9.37□□□□□ -0.91
CDHR3-204ENST00000466351 LRPPRCP42704 1394 aaKnown RBP9.37□□□□□ -0.91
CDHR3-204ENST00000466351 MYOM2P54296 1465 aa9.36□□□□□ -0.91
CDHR3-204ENST00000466351 SLC24A1O60721 1099 aa9.36□□□□□ -0.91
CDHR3-204ENST00000466351 HNRNPMP52272 730 aaKnown RBP eCLIP9.36□□□□□ -0.91
CDHR3-204ENST00000466351 FKBP8Q14318 412 aa9.36□□□□□ -0.91
CDHR3-204ENST00000466351 MROH1Q8NDA8 1641 aa9.35□□□□□ -0.91
CDHR3-204ENST00000466351 MYO3AQ8NEV4 1616 aa9.35□□□□□ -0.91
CDHR3-204ENST00000466351 CARD11Q9BXL7 1154 aa9.35□□□□□ -0.91
CDHR3-204ENST00000466351 MRS2Q9HD23 443 aa9.35□□□□□ -0.91
CDHR3-204ENST00000466351 EFCAB6Q5THR3 1501 aa9.35□□□□□ -0.91
CDHR3-204ENST00000466351 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.34□□□□□ -0.91
CDHR3-204ENST00000466351 PARD3Q8TEW0 1356 aa9.34□□□□□ -0.91
CDHR3-204ENST00000466351 CLTCL1P53675 1640 aa9.34□□□□□ -0.91
CDHR3-204ENST00000466351 FANCAO15360 1455 aa9.34□□□□□ -0.91
CDHR3-204ENST00000466351 TSHZ2Q9NRE2 1034 aa9.33□□□□□ -0.92
CDHR3-204ENST00000466351 ZNF518AQ6AHZ1 1483 aa9.33□□□□□ -0.92
CDHR3-204ENST00000466351 RNF123Q5XPI4 1314 aa9.32□□□□□ -0.92
CDHR3-204ENST00000466351 MYBBP1AQ9BQG0 1328 aaKnown RBP9.32□□□□□ -0.92
CDHR3-204ENST00000466351 KIDINS220Q9ULH0 1771 aa9.32□□□□□ -0.92
CDHR3-204ENST00000466351 TRAPPC8Q9Y2L5 1435 aa9.32□□□□□ -0.92
CDHR3-204ENST00000466351 KANK1Q14678 1352 aa9.32□□□□□ -0.92
CDHR3-204ENST00000466351 SETBP1Q9Y6X0 1596 aa9.32□□□□□ -0.92
CDHR3-204ENST00000466351 ZC3H13Q5T200 1668 aaKnown RBP9.32□□□□□ -0.92
CDHR3-204ENST00000466351 MAP3K4Q9Y6R4 1608 aa9.31□□□□□ -0.92
CDHR3-204ENST00000466351 NPC1L1Q9UHC9 1359 aa9.31□□□□□ -0.92
CDHR3-204ENST00000466351 KDM5AP29375 1690 aaKnown RBP9.31□□□□□ -0.92
CDHR3-204ENST00000466351 MYOM1P52179 1685 aa9.3□□□□□ -0.92
CDHR3-204ENST00000466351 ADGRL1O94910 1474 aa9.3□□□□□ -0.92
CDHR3-204ENST00000466351 SCAF11Q99590 1463 aaKnown RBP9.3□□□□□ -0.92
CDHR3-204ENST00000466351 EIF3AQ14152 1382 aaKnown RBP9.3□□□□□ -0.92
CDHR3-204ENST00000466351 SBNO2Q9Y2G9 1366 aa9.3□□□□□ -0.92
CDHR3-204ENST00000466351 CACNB1Q02641 598 aaPredicted RBP9.3□□□□□ -0.92
CDHR3-204ENST00000466351 DCAF11Q8TEB1 546 aa9.3□□□□□ -0.92
CDHR3-204ENST00000466351 PPP4R2Q9NY27 417 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms