RNA–Protein interactions for RNA: ENST00000466223.1

AGRN-204, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-204ENST00000466223 CNTLNQ9NXG0 1405 aa24.01■■□□□ 1.43
AGRN-204ENST00000466223 ANKRD50Q9ULJ7 1429 aa24.01■■□□□ 1.43
AGRN-204ENST00000466223 PTPRMP28827 1452 aa24.01■■□□□ 1.43
AGRN-204ENST00000466223 PLPPR3Q6T4P5 718 aa24■■□□□ 1.43
AGRN-204ENST00000466223 WASHC2CQ9Y4E1 1318 aa24■■□□□ 1.43
AGRN-204ENST00000466223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.97■■□□□ 1.433e-15■□□□□ 10.9
AGRN-204ENST00000466223 RNF17Q9BXT8 1623 aaKnown RBP23.97■■□□□ 1.43
AGRN-204ENST00000466223 KANK1Q14678 1352 aa23.95■■□□□ 1.42
AGRN-204ENST00000466223 CLTCQ00610 1675 aaKnown RBP23.95■■□□□ 1.42
AGRN-204ENST00000466223 FAM135AQ9P2D6 1515 aa23.94■■□□□ 1.42
AGRN-204ENST00000466223 ZMYM3Q14202 1370 aa23.92■■□□□ 1.42
AGRN-204ENST00000466223 KDM5DQ9BY66 1539 aa23.92■■□□□ 1.42
AGRN-204ENST00000466223 MROH2AA6NES4 1674 aa23.92■■□□□ 1.42
AGRN-204ENST00000466223 CEBPAP49715 358 aaPredicted RBP23.91■■□□□ 1.42
AGRN-204ENST00000466223 DEPDC5O75140 1603 aa23.89■■□□□ 1.42
AGRN-204ENST00000466223 HFM1A2PYH4 1435 aa23.88■■□□□ 1.41
AGRN-204ENST00000466223 NAIPQ13075 1403 aa23.88■■□□□ 1.41
AGRN-204ENST00000466223 C3P01024 1663 aa23.88■■□□□ 1.41
AGRN-204ENST00000466223 ZC3H13Q5T200 1668 aaKnown RBP23.88■■□□□ 1.41
AGRN-204ENST00000466223 PRDM15P57071 1507 aaPredicted RBP23.88■■□□□ 1.41
AGRN-204ENST00000466223 GCC2Q8IWJ2 1684 aa23.87■■□□□ 1.41
AGRN-204ENST00000466223 MROH1Q8NDA8 1641 aa23.87■■□□□ 1.41
AGRN-204ENST00000466223 ABCC3O15438 1527 aa23.84■■□□□ 1.41
AGRN-204ENST00000466223 ILDR1Q86SU0 546 aaPredicted RBP23.84■■□□□ 1.41
AGRN-204ENST00000466223 CEP152O94986 1710 aa23.83■■□□□ 1.41
AGRN-204ENST00000466223 SETD1BQ9UPS6 1966 aaKnown RBP23.81■■□□□ 1.4
AGRN-204ENST00000466223 UNC13BO14795 1591 aa23.81■■□□□ 1.4
AGRN-204ENST00000466223 NUP155O75694 1391 aa23.8■■□□□ 1.4
AGRN-204ENST00000466223 NPATQ14207 1427 aa23.78■■□□□ 1.4
AGRN-204ENST00000466223 CAMSAP1Q5T5Y3 1602 aa23.78■■□□□ 1.4
AGRN-204ENST00000466223 TRIM52Q96A61 297 aa23.78■■□□□ 1.4
AGRN-204ENST00000466223 ACIN1Q9UKV3 1341 aaKnown RBP23.78■■□□□ 1.4
AGRN-204ENST00000466223 VWDEQ8N2E2 1590 aa23.78■■□□□ 1.4
AGRN-204ENST00000466223 PZPP20742 1482 aa23.77■■□□□ 1.4
AGRN-204ENST00000466223 LMTK2Q8IWU2 1503 aa23.76■■□□□ 1.39
AGRN-204ENST00000466223 SETD5Q9C0A6 1442 aa23.76■■□□□ 1.39
AGRN-204ENST00000466223 FBXO31Q5XUX0 539 aaPredicted RBP23.75■■□□□ 1.39
AGRN-204ENST00000466223 CFAP65Q6ZU64 1925 aaKnown RBP23.74■■□□□ 1.39
AGRN-204ENST00000466223 ARHGAP31Q2M1Z3 1444 aa23.74■■□□□ 1.39
AGRN-204ENST00000466223 TRIM26Q12899 539 aaPredicted RBP23.73■■□□□ 1.39
AGRN-204ENST00000466223 IQGAP3Q86VI3 1631 aa23.73■■□□□ 1.39
AGRN-204ENST00000466223 PREX1Q8TCU6 1659 aa23.73■■□□□ 1.39
AGRN-204ENST00000466223 UHRF1BP1Q6BDS2 1440 aa23.72■■□□□ 1.39
AGRN-204ENST00000466223 TET3O43151 1660 aa23.7■■□□□ 1.39
AGRN-204ENST00000466223 TNRQ92752 1358 aa23.7■■□□□ 1.38
AGRN-204ENST00000466223 EFCAB6Q5THR3 1501 aa23.69■■□□□ 1.38
AGRN-204ENST00000466223 ERVK-7P63135 1459 aa23.66■■□□□ 1.38
AGRN-204ENST00000466223 RPRD2Q5VT52 1461 aaKnown RBP23.66■■□□□ 1.38
AGRN-204ENST00000466223 RAB3GAP2Q9H2M9 1393 aa23.65■■□□□ 1.38
AGRN-204ENST00000466223 SLC4A1APQ9BWU0 796 aaKnown RBP23.65■■□□□ 1.38
AGRN-204ENST00000466223 SPATA31D1Q6ZQQ2 1576 aa23.65■■□□□ 1.38
AGRN-204ENST00000466223 LMTK3Q96Q04 1460 aa23.63■■□□□ 1.37
AGRN-204ENST00000466223 HRCP23327 699 aa23.62■■□□□ 1.37
AGRN-204ENST00000466223 MYO3AQ8NEV4 1616 aa23.62■■□□□ 1.37
AGRN-204ENST00000466223 NLRP1Q9C000 1473 aa23.61■■□□□ 1.37
AGRN-204ENST00000466223 E9PCH4 1651 aa23.6■■□□□ 1.37
AGRN-204ENST00000466223 A2ML1A8K2U0 1454 aa23.58■■□□□ 1.37
AGRN-204ENST00000466223 HSPA2P54652 639 aa23.58■■□□□ 1.37
AGRN-204ENST00000466223 PKD2Q13563 968 aa23.58■■□□□ 1.37
AGRN-204ENST00000466223 SLC52A1Q9NWF4 448 aa23.58■■□□□ 1.37
AGRN-204ENST00000466223 CEP170BQ9Y4F5 1589 aaPredicted RBP23.57■■□□□ 1.36
AGRN-204ENST00000466223 MPHOSPH9Q99550 1183 aa23.57■■□□□ 1.36
AGRN-204ENST00000466223 NOS1P29475 1434 aa23.57■■□□□ 1.36
AGRN-204ENST00000466223 STAG3Q9UJ98 1225 aa23.56■■□□□ 1.36
AGRN-204ENST00000466223 ZNF142P52746 1687 aaPredicted RBP23.56■■□□□ 1.36
AGRN-204ENST00000466223 THEMISQ8N1K5 641 aaPredicted RBP23.55■■□□□ 1.36
AGRN-204ENST00000466223 IDI1Q13907 227 aa23.52■■□□□ 1.36
AGRN-204ENST00000466223 UGGT1Q9NYU2 1555 aa23.52■■□□□ 1.36
AGRN-204ENST00000466223 SYNMO15061 1565 aa23.51■■□□□ 1.35
AGRN-204ENST00000466223 SPHKAPQ2M3C7 1700 aa23.49■■□□□ 1.35
AGRN-204ENST00000466223 PTPRTO14522 1441 aa23.47■■□□□ 1.35
AGRN-204ENST00000466223 PIK3C2BO00750 1634 aa23.46■■□□□ 1.35
AGRN-204ENST00000466223 CHGAP10645 457 aaKnown RBP23.46■■□□□ 1.35
AGRN-204ENST00000466223 FOXD1Q16676 465 aa23.45■■□□□ 1.34
AGRN-204ENST00000466223 UBR1Q8IWV7 1749 aa23.44■■□□□ 1.34
AGRN-204ENST00000466223 ANKLE2Q86XL3 938 aa23.43■■□□□ 1.34
AGRN-204ENST00000466223 DMRT2Q9Y5R5 561 aa23.43■■□□□ 1.34
AGRN-204ENST00000466223 PLA2R1Q13018 1463 aa23.43■■□□□ 1.34
AGRN-204ENST00000466223 KDM5AP29375 1690 aaKnown RBP23.42■■□□□ 1.34
AGRN-204ENST00000466223 TRPM2O94759 1503 aa23.42■■□□□ 1.34
AGRN-204ENST00000466223 ADGRB3O60242 1522 aa23.4■■□□□ 1.34
AGRN-204ENST00000466223 PCGF6Q9BYE7 350 aa23.4■■□□□ 1.34
AGRN-204ENST00000466223 EID1Q9Y6B2 187 aa23.4■■□□□ 1.34
AGRN-204ENST00000466223 NCKAP5LQ9HCH0 1330 aa23.39■■□□□ 1.34
AGRN-204ENST00000466223 HDGFP51858 240 aaKnown RBP23.39■■□□□ 1.33
AGRN-204ENST00000466223 FBXO41Q8TF61 875 aa23.39■■□□□ 1.33
AGRN-204ENST00000466223 STRCQ7RTU9 1775 aa23.37■■□□□ 1.33
AGRN-204ENST00000466223 CCDC144AA2RUR9 1427 aa23.36■■□□□ 1.33
AGRN-204ENST00000466223 TXNDC2Q86VQ3 553 aa23.36■■□□□ 1.33
AGRN-204ENST00000466223 TMEM131LA2VDJ0 1609 aa23.35■■□□□ 1.33
AGRN-204ENST00000466223 TMEM2Q9UHN6 1383 aa23.35■■□□□ 1.33
AGRN-204ENST00000466223 KIF1BO60333 1816 aa23.35■■□□□ 1.33
AGRN-204ENST00000466223 CLTCL1P53675 1640 aa23.34■■□□□ 1.33
AGRN-204ENST00000466223 ZNF326Q5BKZ1 582 aaKnown RBP23.34■■□□□ 1.33
AGRN-204ENST00000466223 SLIT1O75093 1534 aa23.33■■□□□ 1.33
AGRN-204ENST00000466223 POLR1AO95602 1720 aaPredicted RBP23.33■■□□□ 1.33
AGRN-204ENST00000466223 MYO5BQ9ULV0 1848 aa23.33■■□□□ 1.32
AGRN-204ENST00000466223 ARHGAP23Q9P227 1491 aa23.31■■□□□ 1.32
AGRN-204ENST00000466223 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.31■■□□□ 1.32
AGRN-204ENST00000466223 PPP1R15AO75807 674 aaPredicted RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms