RNA–Protein interactions for RNA: ENST00000466072.5

PCCB-207, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,844 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-207ENST00000466072 CNTLNQ9NXG0 1405 aa26.89■■□□□ 1.9
PCCB-207ENST00000466072 ADGRL2O95490 1459 aa26.88■■□□□ 1.89
PCCB-207ENST00000466072 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.87■■□□□ 1.89
PCCB-207ENST00000466072 PPP6R1Q9UPN7 881 aa26.86■■□□□ 1.89
PCCB-207ENST00000466072 WASHC2CQ9Y4E1 1318 aa26.84■■□□□ 1.89
PCCB-207ENST00000466072 LMTK3Q96Q04 1460 aa26.83■■□□□ 1.89
PCCB-207ENST00000466072 ERBINQ96RT1 1412 aa26.83■■□□□ 1.89
PCCB-207ENST00000466072 MROH1Q8NDA8 1641 aa26.83■■□□□ 1.89
PCCB-207ENST00000466072 EIF2AK4Q9P2K8 1649 aaKnown RBP26.83■■□□□ 1.89
PCCB-207ENST00000466072 RNF17Q9BXT8 1623 aaKnown RBP26.82■■□□□ 1.88
PCCB-207ENST00000466072 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.81■■□□□ 1.88
PCCB-207ENST00000466072 MROH2AA6NES4 1674 aa26.81■■□□□ 1.88
PCCB-207ENST00000466072 HSPA2P54652 639 aa26.81■■□□□ 1.88
PCCB-207ENST00000466072 KDM5DQ9BY66 1539 aa26.79■■□□□ 1.88
PCCB-207ENST00000466072 FBXO31Q5XUX0 539 aaPredicted RBP26.79■■□□□ 1.88
PCCB-207ENST00000466072 ANKRD50Q9ULJ7 1429 aa26.77■■□□□ 1.88
PCCB-207ENST00000466072 ROCK1Q13464 1354 aa26.76■■□□□ 1.87
PCCB-207ENST00000466072 ABCC3O15438 1527 aa26.76■■□□□ 1.87
PCCB-207ENST00000466072 PRDM15P57071 1507 aaPredicted RBP26.71■■□□□ 1.87
PCCB-207ENST00000466072 NPATQ14207 1427 aa26.7■■□□□ 1.87
PCCB-207ENST00000466072 DEPDC5O75140 1603 aa26.7■■□□□ 1.86
PCCB-207ENST00000466072 CEP152O94986 1710 aa26.7■■□□□ 1.86
PCCB-207ENST00000466072 PREX1Q8TCU6 1659 aa26.7■■□□□ 1.86
PCCB-207ENST00000466072 UHRF1BP1Q6BDS2 1440 aa26.69■■□□□ 1.86
PCCB-207ENST00000466072 FAM135AQ9P2D6 1515 aa26.69■■□□□ 1.86
PCCB-207ENST00000466072 PZPP20742 1482 aa26.68■■□□□ 1.86
PCCB-207ENST00000466072 SETD1BQ9UPS6 1966 aaKnown RBP26.67■■□□□ 1.86
PCCB-207ENST00000466072 ZC3H13Q5T200 1668 aaKnown RBP26.64■■□□□ 1.85
PCCB-207ENST00000466072 VWDEQ8N2E2 1590 aa26.63■■□□□ 1.85
PCCB-207ENST00000466072 CAMSAP1Q5T5Y3 1602 aa26.62■■□□□ 1.85
PCCB-207ENST00000466072 KANK1Q14678 1352 aa26.62■■□□□ 1.85
PCCB-207ENST00000466072 TNRQ92752 1358 aa26.61■■□□□ 1.85
PCCB-207ENST00000466072 PCGF6Q9BYE7 350 aa26.61■■□□□ 1.85
PCCB-207ENST00000466072 NAIPQ13075 1403 aa26.6■■□□□ 1.85
PCCB-207ENST00000466072 MYO3AQ8NEV4 1616 aa26.59■■□□□ 1.85
PCCB-207ENST00000466072 ERVK-7P63135 1459 aa26.57■■□□□ 1.84
PCCB-207ENST00000466072 CFAP65Q6ZU64 1925 aaKnown RBP26.57■■□□□ 1.84
PCCB-207ENST00000466072 LMTK2Q8IWU2 1503 aa26.56■■□□□ 1.84
PCCB-207ENST00000466072 ARHGAP31Q2M1Z3 1444 aa26.55■■□□□ 1.84
PCCB-207ENST00000466072 UNC13BO14795 1591 aa26.55■■□□□ 1.84
PCCB-207ENST00000466072 SPATA31D1Q6ZQQ2 1576 aa26.54■■□□□ 1.84
PCCB-207ENST00000466072 CEP170BQ9Y4F5 1589 aaPredicted RBP26.52■■□□□ 1.84
PCCB-207ENST00000466072 NUP155O75694 1391 aa26.52■■□□□ 1.84
PCCB-207ENST00000466072 HFM1A2PYH4 1435 aa26.52■■□□□ 1.84
PCCB-207ENST00000466072 EFCAB6Q5THR3 1501 aa26.49■■□□□ 1.83
PCCB-207ENST00000466072 A2ML1A8K2U0 1454 aa26.49■■□□□ 1.83
PCCB-207ENST00000466072 ZNF142P52746 1687 aaPredicted RBP26.48■■□□□ 1.83
PCCB-207ENST00000466072 STRCQ7RTU9 1775 aa26.48■■□□□ 1.83
PCCB-207ENST00000466072 GCC2Q8IWJ2 1684 aa26.48■■□□□ 1.83
PCCB-207ENST00000466072 NCKAP5LQ9HCH0 1330 aa26.45■■□□□ 1.83
PCCB-207ENST00000466072 TRIM26Q12899 539 aaPredicted RBP26.44■■□□□ 1.82
PCCB-207ENST00000466072 IQGAP3Q86VI3 1631 aa26.44■■□□□ 1.82
PCCB-207ENST00000466072 NLRP1Q9C000 1473 aa26.44■■□□□ 1.82
PCCB-207ENST00000466072 TET3O43151 1660 aa26.43■■□□□ 1.82
PCCB-207ENST00000466072 NOS1P29475 1434 aa26.42■■□□□ 1.82
PCCB-207ENST00000466072 SYNMO15061 1565 aa26.41■■□□□ 1.82
PCCB-207ENST00000466072 IDI1Q13907 227 aa26.4■■□□□ 1.82
PCCB-207ENST00000466072 TRIM52Q96A61 297 aa26.4■■□□□ 1.82
PCCB-207ENST00000466072 UGGT1Q9NYU2 1555 aa26.4■■□□□ 1.82
PCCB-207ENST00000466072 E9PCH4 1651 aa26.39■■□□□ 1.81
PCCB-207ENST00000466072 RPRD2Q5VT52 1461 aaKnown RBP26.37■■□□□ 1.81
PCCB-207ENST00000466072 THEMISQ8N1K5 641 aaPredicted RBP26.36■■□□□ 1.81
PCCB-207ENST00000466072 PLA2R1Q13018 1463 aa26.35■■□□□ 1.81
PCCB-207ENST00000466072 PIK3C2BO00750 1634 aa26.33■■□□□ 1.81
PCCB-207ENST00000466072 UBR1Q8IWV7 1749 aa26.31■■□□□ 1.8
PCCB-207ENST00000466072 HRCP23327 699 aa26.31■■□□□ 1.8
PCCB-207ENST00000466072 SETD5Q9C0A6 1442 aa26.3■■□□□ 1.8
PCCB-207ENST00000466072 PKD2Q13563 968 aa26.3■■□□□ 1.8
PCCB-207ENST00000466072 DMRT2Q9Y5R5 561 aa26.3■■□□□ 1.8
PCCB-207ENST00000466072 PTPRTO14522 1441 aa26.29■■□□□ 1.8
PCCB-207ENST00000466072 SLC52A1Q9NWF4 448 aa26.28■■□□□ 1.8
PCCB-207ENST00000466072 ANKLE2Q86XL3 938 aa26.28■■□□□ 1.8
PCCB-207ENST00000466072 STAG3Q9UJ98 1225 aa26.28■■□□□ 1.8
PCCB-207ENST00000466072 SLC4A1APQ9BWU0 796 aaKnown RBP26.27■■□□□ 1.8
PCCB-207ENST00000466072 LTKP29376 864 aa26.26■■□□□ 1.79
PCCB-207ENST00000466072 FOXD1Q16676 465 aa26.26■■□□□ 1.79
PCCB-207ENST00000466072 NEURL4Q96JN8 1562 aa26.26■■□□□ 1.79
PCCB-207ENST00000466072 RAB3GAP2Q9H2M9 1393 aa26.25■■□□□ 1.79
PCCB-207ENST00000466072 CHGAP10645 457 aaKnown RBP26.21■■□□□ 1.79
PCCB-207ENST00000466072 TXNDC2Q86VQ3 553 aa26.21■■□□□ 1.79
PCCB-207ENST00000466072 TMEM2Q9UHN6 1383 aa26.21■■□□□ 1.79
PCCB-207ENST00000466072 ARHGAP23Q9P227 1491 aa26.21■■□□□ 1.79
PCCB-207ENST00000466072 ADGRB3O60242 1522 aa26.2■■□□□ 1.79
PCCB-207ENST00000466072 MPHOSPH9Q99550 1183 aa26.2■■□□□ 1.78
PCCB-207ENST00000466072 POLR1AO95602 1720 aaPredicted RBP26.2■■□□□ 1.78
PCCB-207ENST00000466072 SLIT1O75093 1534 aa26.19■■□□□ 1.78
PCCB-207ENST00000466072 NPHP4O75161 1426 aaPredicted RBP26.17■■□□□ 1.78
PCCB-207ENST00000466072 ZNF335Q9H4Z2 1342 aaPredicted RBP26.17■■□□□ 1.78
PCCB-207ENST00000466072 SPHKAPQ2M3C7 1700 aa26.17■■□□□ 1.78
PCCB-207ENST00000466072 SENP3Q9H4L4 574 aaPredicted RBP26.16■■□□□ 1.78
PCCB-207ENST00000466072 TMEM131LA2VDJ0 1609 aa26.16■■□□□ 1.78
PCCB-207ENST00000466072 MYO5BQ9ULV0 1848 aa26.16■■□□□ 1.78
PCCB-207ENST00000466072 MED14O60244 1454 aa26.15■■□□□ 1.78
PCCB-207ENST00000466072 SCAF11Q99590 1463 aaKnown RBP26.15■■□□□ 1.78
PCCB-207ENST00000466072 KDM5AP29375 1690 aaKnown RBP26.14■■□□□ 1.78
PCCB-207ENST00000466072 NUTM2DQ5VT03 806 aaPredicted RBP26.14■■□□□ 1.77
PCCB-207ENST00000466072 EID1Q9Y6B2 187 aa26.13■■□□□ 1.77
PCCB-207ENST00000466072 CLTCL1P53675 1640 aa26.11■■□□□ 1.77
PCCB-207ENST00000466072 TRPM2O94759 1503 aa26.11■■□□□ 1.77
PCCB-207ENST00000466072 LTBP4Q8N2S1 1624 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms