RNA–Protein interactions for RNA: ENST00000466058.1

KDM3A-209, Transcript of lysine demethylase 3A, humanhuman

TSL 4

Gene KDM3A, Length 448 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-209ENST00000466058 MROH2AA6NES4 1674 aa9.78□□□□□ -0.84
KDM3A-209ENST00000466058 DNMT1P26358 1616 aaKnown RBP9.76□□□□□ -0.85
KDM3A-209ENST00000466058 RXRBP28702 533 aa9.76□□□□□ -0.85
KDM3A-209ENST00000466058 CLTCQ00610 1675 aaKnown RBP9.76□□□□□ -0.85
KDM3A-209ENST00000466058 MEX3CQ5U5Q3 659 aaKnown RBP9.75□□□□□ -0.85
KDM3A-209ENST00000466058 REREQ9P2R6 1566 aa9.75□□□□□ -0.85
KDM3A-209ENST00000466058 ZNF518AQ6AHZ1 1483 aa9.74□□□□□ -0.85
KDM3A-209ENST00000466058 AMER1Q5JTC6 1135 aaPredicted RBP9.74□□□□□ -0.85
KDM3A-209ENST00000466058 ZNF772Q68DY9 489 aaPredicted RBP9.74□□□□□ -0.85
KDM3A-209ENST00000466058 NUP153P49790 1475 aaKnown RBP9.73□□□□□ -0.85
KDM3A-209ENST00000466058 NUTM2BA6NNL0 878 aaPredicted RBP9.73□□□□□ -0.85
KDM3A-209ENST00000466058 NUTM2EB1AL46 878 aaPredicted RBP9.73□□□□□ -0.85
KDM3A-209ENST00000466058 NUTM2DQ5VT03 806 aaPredicted RBP9.73□□□□□ -0.85
KDM3A-209ENST00000466058 EFCAB2Q5VUJ9 269 aa9.73□□□□□ -0.85
KDM3A-209ENST00000466058 NUTM2AQ8IVF1 878 aaPredicted RBP9.73□□□□□ -0.85
KDM3A-209ENST00000466058 RTN4Q9NQC3 1192 aaKnown RBP9.73□□□□□ -0.85
KDM3A-209ENST00000466058 PLCH2O75038 1416 aa9.73□□□□□ -0.85
KDM3A-209ENST00000466058 A2ML1A8K2U0 1454 aa9.72□□□□□ -0.85
KDM3A-209ENST00000466058 KDM5CP41229 1560 aa9.72□□□□□ -0.85
KDM3A-209ENST00000466058 SUPT5HO00267 1087 aaKnown RBP9.72□□□□□ -0.85
KDM3A-209ENST00000466058 ANKLE2Q86XL3 938 aa9.72□□□□□ -0.85
KDM3A-209ENST00000466058 ROBO1Q9Y6N7 1651 aa9.71□□□□□ -0.85
KDM3A-209ENST00000466058 XIRP1Q702N8 1843 aaKnown RBP9.71□□□□□ -0.85
KDM3A-209ENST00000466058 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.71□□□□□ -0.86
KDM3A-209ENST00000466058 NPHP4O75161 1426 aaPredicted RBP9.71□□□□□ -0.86
KDM3A-209ENST00000466058 FAM135BQ49AJ0 1406 aa9.71□□□□□ -0.86
KDM3A-209ENST00000466058 FKBP8Q14318 412 aa9.7□□□□□ -0.86
KDM3A-209ENST00000466058 SYNMO15061 1565 aa9.7□□□□□ -0.86
KDM3A-209ENST00000466058 LRP6O75581 1613 aa9.69□□□□□ -0.86
KDM3A-209ENST00000466058 MYO5CQ9NQX4 1742 aa9.69□□□□□ -0.86
KDM3A-209ENST00000466058 PHLPP1O60346 1717 aa9.68□□□□□ -0.86
KDM3A-209ENST00000466058 ITSN2Q9NZM3 1697 aa9.68□□□□□ -0.86
KDM3A-209ENST00000466058 IQGAP1P46940 1657 aa9.67□□□□□ -0.86
KDM3A-209ENST00000466058 JCADQ9P266 1359 aa9.67□□□□□ -0.86
KDM3A-209ENST00000466058 YY1P25490 414 aa9.67□□□□□ -0.86
KDM3A-209ENST00000466058 RANGAP1P46060 587 aaPredicted RBP9.66□□□□□ -0.86
KDM3A-209ENST00000466058 CDK13Q14004 1512 aaKnown RBP9.66□□□□□ -0.86
KDM3A-209ENST00000466058 CDK12Q9NYV4 1490 aaPredicted RBP9.66□□□□□ -0.86
KDM3A-209ENST00000466058 MLH3Q9UHC1 1453 aa9.66□□□□□ -0.86
KDM3A-209ENST00000466058 RGS12O14924 1447 aa9.65□□□□□ -0.86
KDM3A-209ENST00000466058 KIDINS220Q9ULH0 1771 aa9.65□□□□□ -0.86
KDM3A-209ENST00000466058 GGT6Q6P531 493 aa9.65□□□□□ -0.86
KDM3A-209ENST00000466058 AKT1S1Q96B36 256 aa9.65□□□□□ -0.86
KDM3A-209ENST00000466058 EP400Q96L91 3159 aa9.65□□□□□ -0.86
KDM3A-209ENST00000466058 ABCC1P33527 1531 aa9.65□□□□□ -0.86
KDM3A-209ENST00000466058 ARHGAP5Q13017 1502 aa9.64□□□□□ -0.87
KDM3A-209ENST00000466058 FBXO31Q5XUX0 539 aaPredicted RBP9.63□□□□□ -0.87
KDM3A-209ENST00000466058 MED14O60244 1454 aa9.63□□□□□ -0.87
KDM3A-209ENST00000466058 SENP3-EIF4A1A0A087X0R7 540 aa9.62□□□□□ -0.87
KDM3A-209ENST00000466058 THEMISQ8N1K5 641 aaPredicted RBP9.62□□□□□ -0.87
KDM3A-209ENST00000466058 DEPDC5O75140 1603 aa9.62□□□□□ -0.87
KDM3A-209ENST00000466058 AFF2P51816 1311 aa9.61□□□□□ -0.87
KDM3A-209ENST00000466058 SLC24A1O60721 1099 aa9.61□□□□□ -0.87
KDM3A-209ENST00000466058 TNRQ92752 1358 aa9.61□□□□□ -0.87
KDM3A-209ENST00000466058 LRP5O75197 1615 aa9.6□□□□□ -0.87
KDM3A-209ENST00000466058 SAMD9Q5K651 1589 aa9.6□□□□□ -0.87
KDM3A-209ENST00000466058 ATAD2Q6PL18 1390 aa9.6□□□□□ -0.87
KDM3A-209ENST00000466058 SPDYE2BA6NHP3 402 aa9.59□□□□□ -0.87
KDM3A-209ENST00000466058 SPDYE6P0CI01 402 aa9.59□□□□□ -0.87
KDM3A-209ENST00000466058 SPDYE2Q495Y8 402 aa9.59□□□□□ -0.87
KDM3A-209ENST00000466058 QTRT2Q9H974 415 aaKnown RBP9.59□□□□□ -0.87
KDM3A-209ENST00000466058 SPATA31A6Q5VVP1 1343 aa9.58□□□□□ -0.88
KDM3A-209ENST00000466058 KIF14Q15058 1648 aa9.58□□□□□ -0.88
KDM3A-209ENST00000466058 UGGT1Q9NYU2 1555 aa9.58□□□□□ -0.88
KDM3A-209ENST00000466058 ZC3H13Q5T200 1668 aaKnown RBP9.58□□□□□ -0.88
KDM3A-209ENST00000466058 FAM135AQ9P2D6 1515 aa9.57□□□□□ -0.88
KDM3A-209ENST00000466058 COL16A1Q07092 1604 aaPredicted RBP9.57□□□□□ -0.88
KDM3A-209ENST00000466058 RBM6P78332 1123 aaKnown RBP9.57□□□□□ -0.88
KDM3A-209ENST00000466058 CDC42BPBQ9Y5S2 1711 aa9.56□□□□□ -0.88
KDM3A-209ENST00000466058 TMEM94Q12767 1356 aa9.56□□□□□ -0.88
KDM3A-209ENST00000466058 ATP1B4Q9UN42 357 aaPredicted RBP9.56□□□□□ -0.88
KDM3A-209ENST00000466058 PSDA5PKW4 1024 aaPredicted RBP9.54□□□□□ -0.88
KDM3A-209ENST00000466058 POTEHQ6S545 545 aa9.54□□□□□ -0.88
KDM3A-209ENST00000466058 PROSER2Q86WR7 435 aaPredicted RBP9.53□□□□□ -0.88
KDM3A-209ENST00000466058 SLAIN2Q9P270 581 aa9.53□□□□□ -0.88
KDM3A-209ENST00000466058 LRRC9Q6ZRR7 1453 aa9.53□□□□□ -0.88
KDM3A-209ENST00000466058 KDM5DQ9BY66 1539 aa9.52□□□□□ -0.88
KDM3A-209ENST00000466058 SHPRHQ149N8 1683 aa9.52□□□□□ -0.89
KDM3A-209ENST00000466058 CHRDL2Q6WN34 429 aa9.52□□□□□ -0.89
KDM3A-209ENST00000466058 C8orf37Q96NL8 207 aa9.52□□□□□ -0.89
KDM3A-209ENST00000466058 CEP350Q5VT06 3117 aa9.52□□□□□ -0.89
KDM3A-209ENST00000466058 SAMD9LQ8IVG5 1584 aa9.51□□□□□ -0.89
KDM3A-209ENST00000466058 DEFB132Q7Z7B7 95 aa9.51□□□□□ -0.89
KDM3A-209ENST00000466058 SPAG9O60271 1321 aaKnown RBP9.51□□□□□ -0.89
KDM3A-209ENST00000466058 FGD6Q6ZV73 1430 aa9.5□□□□□ -0.89
KDM3A-209ENST00000466058 A2MP01023 1474 aa9.5□□□□□ -0.89
KDM3A-209ENST00000466058 MAP3K1Q13233 1512 aa9.5□□□□□ -0.89
KDM3A-209ENST00000466058 MIA2Q96PC5 1412 aa9.49□□□□□ -0.89
KDM3A-209ENST00000466058 HRCP23327 699 aa9.49□□□□□ -0.89
KDM3A-209ENST00000466058 NGLY1Q96IV0 654 aa9.49□□□□□ -0.89
KDM3A-209ENST00000466058 ZNF692Q9BU19 519 aaPredicted RBP9.49□□□□□ -0.89
KDM3A-209ENST00000466058 ZNF777Q9ULD5 760 aaPredicted RBP9.49□□□□□ -0.89
KDM3A-209ENST00000466058 ATP7AQ04656 1500 aa9.49□□□□□ -0.89
KDM3A-209ENST00000466058 PLXNC1O60486 1568 aa9.49□□□□□ -0.89
KDM3A-209ENST00000466058 NLRP1Q9C000 1473 aa9.48□□□□□ -0.89
KDM3A-209ENST00000466058 LTKP29376 864 aa9.48□□□□□ -0.89
KDM3A-209ENST00000466058 CCDC125Q86Z20 511 aa9.48□□□□□ -0.89
KDM3A-209ENST00000466058 PZPP20742 1482 aa9.47□□□□□ -0.89
KDM3A-209ENST00000466058 PRXQ9BXM0 1461 aa9.47□□□□□ -0.89
KDM3A-209ENST00000466058 HNRNPMP52272 730 aaKnown RBP eCLIP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms