RNA–Protein interactions for RNA: ENST00000465819.1

CSMD2-207, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-207ENST00000465819 EHBP1L1Q8N3D4 1523 aa18.05■□□□□ 0.48
CSMD2-207ENST00000465819 DHX29Q7Z478 1369 aaKnown RBP18.04■□□□□ 0.48
CSMD2-207ENST00000465819 TNRQ92752 1358 aa18.04■□□□□ 0.48
CSMD2-207ENST00000465819 SCAF1Q9H7N4 1312 aaKnown RBP18.04■□□□□ 0.48
CSMD2-207ENST00000465819 HSPA1LP34931 641 aa18.04■□□□□ 0.48
CSMD2-207ENST00000465819 KDM5DQ9BY66 1539 aa18.03■□□□□ 0.48
CSMD2-207ENST00000465819 FAM135AQ9P2D6 1515 aa18.03■□□□□ 0.48
CSMD2-207ENST00000465819 PZPP20742 1482 aa18.03■□□□□ 0.48
CSMD2-207ENST00000465819 SHANK2Q9UPX8 1470 aa18.03■□□□□ 0.48
CSMD2-207ENST00000465819 PIP4K2BP78356 416 aa18.03■□□□□ 0.48
CSMD2-207ENST00000465819 TOM1O60784 492 aa18.02■□□□□ 0.48
CSMD2-207ENST00000465819 FBXO31Q5XUX0 539 aaPredicted RBP18.01■□□□□ 0.47
CSMD2-207ENST00000465819 KIF3BO15066 747 aa18■□□□□ 0.47
CSMD2-207ENST00000465819 CEP162Q5TB80 1403 aa17.99■□□□□ 0.47
CSMD2-207ENST00000465819 CCDC141Q6ZP82 1450 aa17.99■□□□□ 0.47
CSMD2-207ENST00000465819 VWDEQ8N2E2 1590 aa17.99■□□□□ 0.47
CSMD2-207ENST00000465819 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.98■□□□□ 0.47
CSMD2-207ENST00000465819 ANKLE2Q86XL3 938 aa17.97■□□□□ 0.47
CSMD2-207ENST00000465819 DEPDC5O75140 1603 aa17.97■□□□□ 0.47
CSMD2-207ENST00000465819 WASHC2CQ9Y4E1 1318 aa17.97■□□□□ 0.47
CSMD2-207ENST00000465819 UGGT1Q9NYU2 1555 aa17.96■□□□□ 0.47
CSMD2-207ENST00000465819 NLRP1Q9C000 1473 aa17.96■□□□□ 0.47
CSMD2-207ENST00000465819 MED14O60244 1454 aa17.95■□□□□ 0.46
CSMD2-207ENST00000465819 CAMSAP2Q08AD1 1489 aa17.95■□□□□ 0.46
CSMD2-207ENST00000465819 NPHP4O75161 1426 aaPredicted RBP17.95■□□□□ 0.46
CSMD2-207ENST00000465819 MIA2Q96PC5 1412 aa17.95■□□□□ 0.46
CSMD2-207ENST00000465819 ALKQ9UM73 1620 aa17.94■□□□□ 0.46
CSMD2-207ENST00000465819 THEMISQ8N1K5 641 aaPredicted RBP17.94■□□□□ 0.46
CSMD2-207ENST00000465819 IQGAP1P46940 1657 aa17.93■□□□□ 0.46
CSMD2-207ENST00000465819 RSPH4AQ5TD94 716 aa17.92■□□□□ 0.46
CSMD2-207ENST00000465819 NCOA2Q15596 1464 aa17.92■□□□□ 0.46
CSMD2-207ENST00000465819 ARHGEF5Q12774 1597 aa17.91■□□□□ 0.46
CSMD2-207ENST00000465819 STRCP1A6NGW2 1772 aa17.9■□□□□ 0.46
CSMD2-207ENST00000465819 PHF23Q9BUL5 403 aaPredicted RBP17.9■□□□□ 0.46
CSMD2-207ENST00000465819 RNF17Q9BXT8 1623 aaKnown RBP17.89■□□□□ 0.45
CSMD2-207ENST00000465819 ZC3H13Q5T200 1668 aaKnown RBP17.89■□□□□ 0.45
CSMD2-207ENST00000465819 SYNMO15061 1565 aa17.87■□□□□ 0.45
CSMD2-207ENST00000465819 ABCC3O15438 1527 aa17.87■□□□□ 0.45
CSMD2-207ENST00000465819 LRRC7Q96NW7 1537 aa17.86■□□□□ 0.45
CSMD2-207ENST00000465819 TSPY4P0CV99 314 aa17.85■□□□□ 0.45
CSMD2-207ENST00000465819 TSPY10P0CW01 314 aa17.85■□□□□ 0.45
CSMD2-207ENST00000465819 ERVK-7P63135 1459 aa17.84■□□□□ 0.45
CSMD2-207ENST00000465819 EIF2AK4Q9P2K8 1649 aaKnown RBP17.83■□□□□ 0.45
CSMD2-207ENST00000465819 MAST1Q9Y2H9 1570 aa17.83■□□□□ 0.44
CSMD2-207ENST00000465819 SENP3Q9H4L4 574 aaPredicted RBP17.82■□□□□ 0.44
CSMD2-207ENST00000465819 CEP152O94986 1710 aa17.81■□□□□ 0.44
CSMD2-207ENST00000465819 UBR1Q8IWV7 1749 aa17.81■□□□□ 0.44
CSMD2-207ENST00000465819 MROH1Q8NDA8 1641 aa17.8■□□□□ 0.44
CSMD2-207ENST00000465819 CFAP65Q6ZU64 1925 aaKnown RBP17.8■□□□□ 0.44
CSMD2-207ENST00000465819 SCAF11Q99590 1463 aaKnown RBP17.79■□□□□ 0.44
CSMD2-207ENST00000465819 LOC105371045A0A1W2PR82 267 aa17.77■□□□□ 0.44
CSMD2-207ENST00000465819 XIRP1Q702N8 1843 aaKnown RBP17.75■□□□□ 0.43
CSMD2-207ENST00000465819 LRRC9Q6ZRR7 1453 aa17.75■□□□□ 0.43
CSMD2-207ENST00000465819 SLIT1O75093 1534 aa17.74■□□□□ 0.43
CSMD2-207ENST00000465819 ARHGAP23Q9P227 1491 aa17.74■□□□□ 0.43
CSMD2-207ENST00000465819 DUOX2Q9NRD8 1548 aa17.72■□□□□ 0.43
CSMD2-207ENST00000465819 LTKP29376 864 aa17.72■□□□□ 0.43
CSMD2-207ENST00000465819 TXNDC2Q86VQ3 553 aa17.72■□□□□ 0.43
CSMD2-207ENST00000465819 PRDM15P57071 1507 aaPredicted RBP17.71■□□□□ 0.43
CSMD2-207ENST00000465819 RGS17Q9UGC6 210 aaPredicted RBP17.7■□□□□ 0.42
CSMD2-207ENST00000465819 ARHGAP31Q2M1Z3 1444 aa17.69■□□□□ 0.42
CSMD2-207ENST00000465819 PIK3C2BO00750 1634 aa17.69■□□□□ 0.42
CSMD2-207ENST00000465819 MYOM3Q5VTT5 1437 aa17.68■□□□□ 0.42
CSMD2-207ENST00000465819 VPS8Q8N3P4 1428 aa17.67■□□□□ 0.42
CSMD2-207ENST00000465819 EID1Q9Y6B2 187 aa17.67■□□□□ 0.42
CSMD2-207ENST00000465819 FAM135BQ49AJ0 1406 aa17.65■□□□□ 0.42
CSMD2-207ENST00000465819 ERBINQ96RT1 1412 aa17.65■□□□□ 0.42
CSMD2-207ENST00000465819 CROCC2H7BZ55 1655 aa17.65■□□□□ 0.42
CSMD2-207ENST00000465819 KIF15Q9NS87 1388 aa17.65■□□□□ 0.42
CSMD2-207ENST00000465819 TMEM2Q9UHN6 1383 aa17.65■□□□□ 0.42
CSMD2-207ENST00000465819 MAP3K1Q13233 1512 aa17.64■□□□□ 0.41
CSMD2-207ENST00000465819 KDM5AP29375 1690 aaKnown RBP17.64■□□□□ 0.41
CSMD2-207ENST00000465819 KANK4Q5T7N3 995 aaPredicted RBP17.63■□□□□ 0.41
CSMD2-207ENST00000465819 ROBO1Q9Y6N7 1651 aa17.62■□□□□ 0.41
CSMD2-207ENST00000465819 STAG3Q9UJ98 1225 aa17.62■□□□□ 0.41
CSMD2-207ENST00000465819 TMEM94Q12767 1356 aa17.62■□□□□ 0.41
CSMD2-207ENST00000465819 EFCAB6Q5THR3 1501 aa17.62■□□□□ 0.41
CSMD2-207ENST00000465819 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.61■□□□□ 0.41
CSMD2-207ENST00000465819 RRP7BPQ9NSQ0 103 aa17.6■□□□□ 0.41
CSMD2-207ENST00000465819 ABCC5O15440 1437 aa17.6■□□□□ 0.41
CSMD2-207ENST00000465819 KANK1Q14678 1352 aa17.59■□□□□ 0.41
CSMD2-207ENST00000465819 KCNA6P17658 529 aa17.59■□□□□ 0.41
CSMD2-207ENST00000465819 TET3O43151 1660 aa17.58■□□□□ 0.41
CSMD2-207ENST00000465819 POTEAQ6S8J7 498 aa17.58■□□□□ 0.4
CSMD2-207ENST00000465819 PTPN23Q9H3S7 1636 aa17.58■□□□□ 0.4
CSMD2-207ENST00000465819 NWD1Q149M9 1564 aa17.57■□□□□ 0.4
CSMD2-207ENST00000465819 LMTK2Q8IWU2 1503 aa17.57■□□□□ 0.4
CSMD2-207ENST00000465819 IDI1Q13907 227 aa17.56■□□□□ 0.4
CSMD2-207ENST00000465819 NKTRP30414 1462 aaKnown RBP17.56■□□□□ 0.4
CSMD2-207ENST00000465819 DAPK1P53355 1430 aa17.55■□□□□ 0.4
CSMD2-207ENST00000465819 PROSER2Q86WR7 435 aaPredicted RBP17.55■□□□□ 0.4
CSMD2-207ENST00000465819 SLC26A8Q96RN1 970 aa17.55■□□□□ 0.4
CSMD2-207ENST00000465819 ADGRB3O60242 1522 aa17.55■□□□□ 0.4
CSMD2-207ENST00000465819 RBM33Q96EV2 1170 aaKnown RBP17.54■□□□□ 0.4
CSMD2-207ENST00000465819 NOS1P29475 1434 aa17.53■□□□□ 0.4
CSMD2-207ENST00000465819 SETD1AO15047 1707 aaKnown RBP17.52■□□□□ 0.4
CSMD2-207ENST00000465819 PHLPP1O60346 1717 aa17.52■□□□□ 0.4
CSMD2-207ENST00000465819 MSH6P52701 1360 aa17.52■□□□□ 0.39
CSMD2-207ENST00000465819 ANKRD30AQ9BXX3 1397 aa17.5■□□□□ 0.39
CSMD2-207ENST00000465819 FGD6Q6ZV73 1430 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms