RNA–Protein interactions for RNA: ENST00000465818.5

VPS8-218, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-218ENST00000465818 FXR2P51116 673 aaKnown RBP eCLIP11.89□□□□□ -0.51
VPS8-218ENST00000465818 KIF14Q15058 1648 aa11.89□□□□□ -0.51
VPS8-218ENST00000465818 MAPKBP1O60336 1514 aa11.88□□□□□ -0.51
VPS8-218ENST00000465818 MAP3K13O43283 966 aa11.88□□□□□ -0.51
VPS8-218ENST00000465818 PHF8Q9UPP1 1060 aa11.88□□□□□ -0.51
VPS8-218ENST00000465818 SUPT6HQ7KZ85 1726 aaKnown RBP11.88□□□□□ -0.51
VPS8-218ENST00000465818 LRRC9Q6ZRR7 1453 aa11.88□□□□□ -0.51
VPS8-218ENST00000465818 KIF12Q96FN5 646 aa11.86□□□□□ -0.51
VPS8-218ENST00000465818 WDR7Q9Y4E6 1490 aa11.86□□□□□ -0.51
VPS8-218ENST00000465818 TMEM132AQ24JP5 1023 aa11.85□□□□□ -0.51
VPS8-218ENST00000465818 CABP2Q9NPB3 220 aa11.85□□□□□ -0.51
VPS8-218ENST00000465818 TROQ12816 1431 aaPredicted RBP11.85□□□□□ -0.51
VPS8-218ENST00000465818 ASXL2Q76L83 1435 aa11.85□□□□□ -0.51
VPS8-218ENST00000465818 TTC37Q6PGP7 1564 aa11.84□□□□□ -0.51
VPS8-218ENST00000465818 MTUS2Q5JR59 1369 aa11.84□□□□□ -0.51
VPS8-218ENST00000465818 NCKAP5LQ9HCH0 1330 aa11.84□□□□□ -0.51
VPS8-218ENST00000465818 KIF13AQ9H1H9 1805 aa11.83□□□□□ -0.52
VPS8-218ENST00000465818 DIP2BQ9P265 1576 aa11.83□□□□□ -0.52
VPS8-218ENST00000465818 CDC42BPAQ5VT25 1732 aa11.83□□□□□ -0.52
VPS8-218ENST00000465818 ITSN2Q9NZM3 1697 aa11.82□□□□□ -0.52
VPS8-218ENST00000465818 ARHGEF1Q92888 912 aaKnown RBP11.82□□□□□ -0.52
VPS8-218ENST00000465818 MYO5CQ9NQX4 1742 aa11.82□□□□□ -0.52
VPS8-218ENST00000465818 MS4A4AQ96JQ5 239 aa11.81□□□□□ -0.52
VPS8-218ENST00000465818 ABCA9Q8IUA7 1624 aa11.81□□□□□ -0.52
VPS8-218ENST00000465818 PREX2Q70Z35 1606 aa11.8□□□□□ -0.52
VPS8-218ENST00000465818 SEMA3EO15041 775 aa11.8□□□□□ -0.52
VPS8-218ENST00000465818 NLRP6P59044 892 aa11.8□□□□□ -0.52
VPS8-218ENST00000465818 E2F4Q16254 413 aa11.8□□□□□ -0.52
VPS8-218ENST00000465818 KANK4Q5T7N3 995 aaPredicted RBP11.8□□□□□ -0.52
VPS8-218ENST00000465818 NCOA2Q15596 1464 aa11.8□□□□□ -0.52
VPS8-218ENST00000465818 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.8□□□□□ -0.52
VPS8-218ENST00000465818 SOX12O15370 315 aa11.79□□□□□ -0.52
VPS8-218ENST00000465818 ZC3H15Q8WU90 426 aaKnown RBP11.79□□□□□ -0.52
VPS8-218ENST00000465818 TESPA1A2RU30 521 aaPredicted RBP11.78□□□□□ -0.52
VPS8-218ENST00000465818 PPARGC1BQ86YN6 1023 aaKnown RBP11.78□□□□□ -0.52
VPS8-218ENST00000465818 CDK11AQ9UQ88 783 aaPredicted RBP11.78□□□□□ -0.52
VPS8-218ENST00000465818 MAP3K4Q9Y6R4 1608 aa11.78□□□□□ -0.52
VPS8-218ENST00000465818 ABCC10Q5T3U5 1492 aa11.77□□□□□ -0.52
VPS8-218ENST00000465818 BRPF1P55201 1214 aaPredicted RBP11.77□□□□□ -0.53
VPS8-218ENST00000465818 CDC42BPBQ9Y5S2 1711 aa11.77□□□□□ -0.53
VPS8-218ENST00000465818 GLI2P10070 1586 aa11.76□□□□□ -0.53
VPS8-218ENST00000465818 PLEKHD1A6NEE1 506 aa11.76□□□□□ -0.53
VPS8-218ENST00000465818 TSPOAP1O95153 1857 aa11.76□□□□□ -0.53
VPS8-218ENST00000465818 PIP4P2Q8N4L2 257 aa11.74□□□□□ -0.53
VPS8-218ENST00000465818 PPRC1Q5VV67 1664 aaKnown RBP11.74□□□□□ -0.53
VPS8-218ENST00000465818 PHLDB1Q86UU1 1377 aa11.73□□□□□ -0.53
VPS8-218ENST00000465818 CFAP74Q9C0B2 1584 aa11.72□□□□□ -0.53
VPS8-218ENST00000465818 MYOM3Q5VTT5 1437 aa11.72□□□□□ -0.53
VPS8-218ENST00000465818 MFSD10Q14728 455 aa11.72□□□□□ -0.53
VPS8-218ENST00000465818 PTPN23Q9H3S7 1636 aa11.71□□□□□ -0.53
VPS8-218ENST00000465818 KCNH8Q96L42 1107 aa11.71□□□□□ -0.53
VPS8-218ENST00000465818 ARHGAP5Q13017 1502 aa11.7□□□□□ -0.54
VPS8-218ENST00000465818 ARAP3Q8WWN8 1544 aa11.7□□□□□ -0.54
VPS8-218ENST00000465818 GPATCH8Q9UKJ3 1502 aaKnown RBP11.7□□□□□ -0.54
VPS8-218ENST00000465818 CCNB3Q8WWL7 1395 aa11.7□□□□□ -0.54
VPS8-218ENST00000465818 PHF12Q96QT6 1004 aa11.7□□□□□ -0.54
VPS8-218ENST00000465818 CRISPLD2Q9H0B8 497 aa11.7□□□□□ -0.54
VPS8-218ENST00000465818 SAMD9LQ8IVG5 1584 aa11.7□□□□□ -0.54
VPS8-218ENST00000465818 FGD6Q6ZV73 1430 aa11.69□□□□□ -0.54
VPS8-218ENST00000465818 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
VPS8-218ENST00000465818 LARP6Q9BRS8 491 aaKnown RBP11.69□□□□□ -0.54
VPS8-218ENST00000465818 SLC24A3Q9HC58 644 aa11.69□□□□□ -0.54
VPS8-218ENST00000465818 TRPC6Q9Y210 931 aa11.69□□□□□ -0.54
VPS8-218ENST00000465818 CROCC2H7BZ55 1655 aa11.68□□□□□ -0.54
VPS8-218ENST00000465818 ABCC1P33527 1531 aa11.67□□□□□ -0.54
VPS8-218ENST00000465818 CAMSAP2Q08AD1 1489 aa11.67□□□□□ -0.54
VPS8-218ENST00000465818 ZRANB1Q9UGI0 708 aa11.66□□□□□ -0.54
VPS8-218ENST00000465818 PLCH2O75038 1416 aa11.66□□□□□ -0.54
VPS8-218ENST00000465818 CD109Q6YHK3 1445 aa11.66□□□□□ -0.54
VPS8-218ENST00000465818 RRBP1Q9P2E9 1410 aaKnown RBP11.66□□□□□ -0.54
VPS8-218ENST00000465818 SYCP2Q9BX26 1530 aa11.65□□□□□ -0.54
VPS8-218ENST00000465818 FANCAO15360 1455 aa11.65□□□□□ -0.54
VPS8-218ENST00000465818 TCOF1Q13428 1488 aaKnown RBP11.65□□□□□ -0.54
VPS8-218ENST00000465818 CHRDL2Q6WN34 429 aa11.65□□□□□ -0.54
VPS8-218ENST00000465818 MIA2Q96PC5 1412 aa11.65□□□□□ -0.54
VPS8-218ENST00000465818 FAM69CQ0P6D2 419 aa11.64□□□□□ -0.55
VPS8-218ENST00000465818 ARIH1Q9Y4X5 557 aaPredicted RBP11.64□□□□□ -0.55
VPS8-218ENST00000465818 DNMT1P26358 1616 aaKnown RBP11.64□□□□□ -0.55
VPS8-218ENST00000465818 ZMYND10O75800 440 aa11.63□□□□□ -0.55
VPS8-218ENST00000465818 PDE4AP27815 886 aa11.63□□□□□ -0.55
VPS8-218ENST00000465818 CAMK2BQ13554 666 aa11.63□□□□□ -0.55
VPS8-218ENST00000465818 TEX14Q8IWB6 1497 aa11.62□□□□□ -0.55
VPS8-218ENST00000465818 RICTORQ6R327 1708 aa11.61□□□□□ -0.55
VPS8-218ENST00000465818 CD44P16070 742 aaKnown RBP11.61□□□□□ -0.55
VPS8-218ENST00000465818 CFDP1Q9UEE9 299 aaPredicted RBP11.61□□□□□ -0.55
VPS8-218ENST00000465818 NEO1Q92859 1461 aa11.61□□□□□ -0.55
VPS8-218ENST00000465818 ARHGEF5Q12774 1597 aa11.61□□□□□ -0.55
VPS8-218ENST00000465818 ADGBQ8N7X0 1667 aa11.61□□□□□ -0.55
VPS8-218ENST00000465818 ADGRL1O94910 1474 aa11.6□□□□□ -0.55
VPS8-218ENST00000465818 PLEKHH2Q8IVE3 1493 aa11.6□□□□□ -0.55
VPS8-218ENST00000465818 DDX27Q96GQ7 796 aaKnown RBP11.6□□□□□ -0.55
VPS8-218ENST00000465818 FRMPD1Q5SYB0 1578 aa11.59□□□□□ -0.55
VPS8-218ENST00000465818 TMEM106CQ9BVX2 250 aa11.59□□□□□ -0.55
VPS8-218ENST00000465818 NEUROD2Q15784 382 aa11.58□□□□□ -0.56
VPS8-218ENST00000465818 ZNF777Q9ULD5 760 aaPredicted RBP11.58□□□□□ -0.56
VPS8-218ENST00000465818 ARHGEF12Q9NZN5 1544 aa11.58□□□□□ -0.56
VPS8-218ENST00000465818 AKNAQ7Z591 1439 aa11.58□□□□□ -0.56
VPS8-218ENST00000465818 ZNF644Q9H582 1327 aaPredicted RBP11.58□□□□□ -0.56
VPS8-218ENST00000465818 FAM50AQ14320 339 aaKnown RBP11.57□□□□□ -0.56
VPS8-218ENST00000465818 MS4A3Q96HJ5 214 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms