RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 NPATQ14207 1427 aa16.17■□□□□ 0.18
NPHP3-203ENST00000465756 EIF2AK4Q9P2K8 1649 aaKnown RBP16.16■□□□□ 0.18
NPHP3-203ENST00000465756 ROCK1Q13464 1354 aa16.15■□□□□ 0.18
NPHP3-203ENST00000465756 SETD1BQ9UPS6 1966 aaKnown RBP16.14■□□□□ 0.17
NPHP3-203ENST00000465756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.14■□□□□ 0.172e-6■■□□□ 12
NPHP3-203ENST00000465756 ZMYM3Q14202 1370 aa16.13■□□□□ 0.17
NPHP3-203ENST00000465756 KDM5DQ9BY66 1539 aa16.13■□□□□ 0.17
NPHP3-203ENST00000465756 PPARGC1BQ86YN6 1023 aaKnown RBP16.12■□□□□ 0.17
NPHP3-203ENST00000465756 ADGRL2O95490 1459 aa16.12■□□□□ 0.17
NPHP3-203ENST00000465756 MROH2AA6NES4 1674 aa16.12■□□□□ 0.17
NPHP3-203ENST00000465756 STAG3Q9UJ98 1225 aa16.12■□□□□ 0.17
NPHP3-203ENST00000465756 ANKRD50Q9ULJ7 1429 aa16.1■□□□□ 0.17
NPHP3-203ENST00000465756 CROCC2H7BZ55 1655 aa16.1■□□□□ 0.17
NPHP3-203ENST00000465756 NCOA1Q15788 1441 aa16.09■□□□□ 0.17
NPHP3-203ENST00000465756 TNRQ92752 1358 aa16.08■□□□□ 0.17
NPHP3-203ENST00000465756 ZC3H13Q5T200 1668 aaKnown RBP16.08■□□□□ 0.16
NPHP3-203ENST00000465756 HDGFP51858 240 aaKnown RBP16.08■□□□□ 0.16
NPHP3-203ENST00000465756 RRBP1Q9P2E9 1410 aaKnown RBP16.07■□□□□ 0.16
NPHP3-203ENST00000465756 CEBPAP49715 358 aaPredicted RBP16.06■□□□□ 0.16
NPHP3-203ENST00000465756 THEMISQ8N1K5 641 aaPredicted RBP16.06■□□□□ 0.16
NPHP3-203ENST00000465756 PREX1Q8TCU6 1659 aa16.04■□□□□ 0.16
NPHP3-203ENST00000465756 RNF17Q9BXT8 1623 aaKnown RBP16.04■□□□□ 0.16
NPHP3-203ENST00000465756 PZPP20742 1482 aa16.04■□□□□ 0.16
NPHP3-203ENST00000465756 PKD2Q13563 968 aa16.03■□□□□ 0.16
NPHP3-203ENST00000465756 CLTCQ00610 1675 aaKnown RBP16.03■□□□□ 0.16
NPHP3-203ENST00000465756 TRIM52Q96A61 297 aa16.02■□□□□ 0.16
NPHP3-203ENST00000465756 NLRP1Q9C000 1473 aa16.02■□□□□ 0.16
NPHP3-203ENST00000465756 EID1Q9Y6B2 187 aa16.01■□□□□ 0.15
NPHP3-203ENST00000465756 PTPRKQ15262 1439 aa16■□□□□ 0.15
NPHP3-203ENST00000465756 ARHGAP31Q2M1Z3 1444 aa15.99■□□□□ 0.15
NPHP3-203ENST00000465756 SLC52A1Q9NWF4 448 aa15.99■□□□□ 0.15
NPHP3-203ENST00000465756 C3P01024 1663 aa15.99■□□□□ 0.15
NPHP3-203ENST00000465756 ABCC3O15438 1527 aa15.98■□□□□ 0.15
NPHP3-203ENST00000465756 A2ML1A8K2U0 1454 aa15.98■□□□□ 0.15
NPHP3-203ENST00000465756 NUP155O75694 1391 aa15.98■□□□□ 0.15
NPHP3-203ENST00000465756 ANKLE2Q86XL3 938 aa15.98■□□□□ 0.15
NPHP3-203ENST00000465756 PRDM15P57071 1507 aaPredicted RBP15.97■□□□□ 0.15
NPHP3-203ENST00000465756 RPRD2Q5VT52 1461 aaKnown RBP15.96■□□□□ 0.14
NPHP3-203ENST00000465756 HSPA2P54652 639 aa15.94■□□□□ 0.14
NPHP3-203ENST00000465756 LMTK3Q96Q04 1460 aa15.94■□□□□ 0.14
NPHP3-203ENST00000465756 LMTK2Q8IWU2 1503 aa15.94■□□□□ 0.14
NPHP3-203ENST00000465756 SIGLEC1Q9BZZ2 1709 aa15.92■□□□□ 0.14
NPHP3-203ENST00000465756 PLA2R1Q13018 1463 aa15.92■□□□□ 0.14
NPHP3-203ENST00000465756 ERVK-7P63135 1459 aa15.92■□□□□ 0.14
NPHP3-203ENST00000465756 PPP1R15AO75807 674 aaPredicted RBP15.92■□□□□ 0.14
NPHP3-203ENST00000465756 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.92■□□□□ 0.14
NPHP3-203ENST00000465756 PTPRTO14522 1441 aa15.91■□□□□ 0.14
NPHP3-203ENST00000465756 BCANQ96GW7 911 aa15.91■□□□□ 0.14
NPHP3-203ENST00000465756 CAMSAP1Q5T5Y3 1602 aa15.91■□□□□ 0.14
NPHP3-203ENST00000465756 CEP170BQ9Y4F5 1589 aaPredicted RBP15.91■□□□□ 0.14
NPHP3-203ENST00000465756 CHGAP10645 457 aaKnown RBP15.9■□□□□ 0.14
NPHP3-203ENST00000465756 HFM1A2PYH4 1435 aa15.9■□□□□ 0.14
NPHP3-203ENST00000465756 DEPDC5O75140 1603 aa15.89■□□□□ 0.13
NPHP3-203ENST00000465756 FBXO31Q5XUX0 539 aaPredicted RBP15.89■□□□□ 0.13
NPHP3-203ENST00000465756 SLC4A1APQ9BWU0 796 aaKnown RBP15.88■□□□□ 0.13
NPHP3-203ENST00000465756 SPATA31D1Q6ZQQ2 1576 aa15.87■□□□□ 0.13
NPHP3-203ENST00000465756 MYO3AQ8NEV4 1616 aa15.87■□□□□ 0.13
NPHP3-203ENST00000465756 TET3O43151 1660 aa15.87■□□□□ 0.13
NPHP3-203ENST00000465756 UGGT1Q9NYU2 1555 aa15.87■□□□□ 0.13
NPHP3-203ENST00000465756 UNC13BO14795 1591 aa15.87■□□□□ 0.13
NPHP3-203ENST00000465756 CEP152O94986 1710 aa15.86■□□□□ 0.13
NPHP3-203ENST00000465756 EFCAB6Q5THR3 1501 aa15.86■□□□□ 0.13
NPHP3-203ENST00000465756 ZNF142P52746 1687 aaPredicted RBP15.85■□□□□ 0.13
NPHP3-203ENST00000465756 SETD5Q9C0A6 1442 aa15.84■□□□□ 0.13
NPHP3-203ENST00000465756 NAIPQ13075 1403 aa15.84■□□□□ 0.13
NPHP3-203ENST00000465756 GCC2Q8IWJ2 1684 aa15.84■□□□□ 0.13
NPHP3-203ENST00000465756 TXNDC2Q86VQ3 553 aa15.83■□□□□ 0.12
NPHP3-203ENST00000465756 VWDEQ8N2E2 1590 aa15.82■□□□□ 0.12
NPHP3-203ENST00000465756 MROH1Q8NDA8 1641 aa15.82■□□□□ 0.12
NPHP3-203ENST00000465756 HRCP23327 699 aa15.81■□□□□ 0.12
NPHP3-203ENST00000465756 ZNF326Q5BKZ1 582 aaKnown RBP15.81■□□□□ 0.12
NPHP3-203ENST00000465756 IQGAP3Q86VI3 1631 aa15.81■□□□□ 0.12
NPHP3-203ENST00000465756 NCKAP5LQ9HCH0 1330 aa15.79■□□□□ 0.12
NPHP3-203ENST00000465756 NOS1P29475 1434 aa15.79■□□□□ 0.12
NPHP3-203ENST00000465756 NPHP4O75161 1426 aaPredicted RBP15.78■□□□□ 0.12
NPHP3-203ENST00000465756 IDI1Q13907 227 aa15.77■□□□□ 0.12
NPHP3-203ENST00000465756 SCAF11Q99590 1463 aaKnown RBP15.77■□□□□ 0.11
NPHP3-203ENST00000465756 TMEM2Q9UHN6 1383 aa15.76■□□□□ 0.11
NPHP3-203ENST00000465756 CERKQ8TCT0 537 aa15.74■□□□□ 0.11
NPHP3-203ENST00000465756 ADGRB3O60242 1522 aa15.74■□□□□ 0.11
NPHP3-203ENST00000465756 RPGRIP1LQ68CZ1 1315 aa15.74■□□□□ 0.11
NPHP3-203ENST00000465756 CFAP65Q6ZU64 1925 aaKnown RBP15.74■□□□□ 0.11
NPHP3-203ENST00000465756 KDM5AP29375 1690 aaKnown RBP15.74■□□□□ 0.11
NPHP3-203ENST00000465756 CCDC144AA2RUR9 1427 aa15.72■□□□□ 0.11
NPHP3-203ENST00000465756 VGFO15240 615 aaPredicted RBP15.72■□□□□ 0.11
NPHP3-203ENST00000465756 MPHOSPH9Q99550 1183 aa15.72■□□□□ 0.11
NPHP3-203ENST00000465756 IQSEC2Q5JU85 1478 aa15.71■□□□□ 0.11
NPHP3-203ENST00000465756 RIMS2Q9UQ26 1411 aa15.71■□□□□ 0.1
NPHP3-203ENST00000465756 FBXO41Q8TF61 875 aa15.7■□□□□ 0.1
NPHP3-203ENST00000465756 SLIT1O75093 1534 aa15.69■□□□□ 0.1
NPHP3-203ENST00000465756 CPS1P31327 1500 aa15.69■□□□□ 0.1
NPHP3-203ENST00000465756 POLR1AO95602 1720 aaPredicted RBP15.69■□□□□ 0.1
NPHP3-203ENST00000465756 TRIM26Q12899 539 aaPredicted RBP15.69■□□□□ 0.1
NPHP3-203ENST00000465756 STAC3Q96MF2 364 aa15.69■□□□□ 0.1
NPHP3-203ENST00000465756 MED14O60244 1454 aa15.68■□□□□ 0.1
NPHP3-203ENST00000465756 RAB3GAP2Q9H2M9 1393 aa15.68■□□□□ 0.1
NPHP3-203ENST00000465756 PIK3C2BO00750 1634 aa15.68■□□□□ 0.1
NPHP3-203ENST00000465756 TOM1O60784 492 aa15.68■□□□□ 0.1
NPHP3-203ENST00000465756 ARHGAP23Q9P227 1491 aa15.67■□□□□ 0.1
NPHP3-203ENST00000465756 UBR1Q8IWV7 1749 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms