RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 HCSTQ9UBK5 93 aa12.69□□□□□ -0.38
SPTA1-203ENST00000465741 TBC1D12O60347 775 aa12.68□□□□□ -0.38
SPTA1-203ENST00000465741 OXER1Q8TDS5 423 aa12.68□□□□□ -0.38
SPTA1-203ENST00000465741 PSDA5PKW4 1024 aaPredicted RBP12.67□□□□□ -0.38
SPTA1-203ENST00000465741 TK2O00142 265 aa12.65□□□□□ -0.38
SPTA1-203ENST00000465741 GPIHBP1Q8IV16 184 aa12.63□□□□□ -0.39
SPTA1-203ENST00000465741 RBM26Q5T8P6 1007 aaKnown RBP12.61□□□□□ -0.39
SPTA1-203ENST00000465741 GRXCR2A6NFK2 248 aa12.58□□□□□ -0.4
SPTA1-203ENST00000465741 EVI5O60447 810 aa12.58□□□□□ -0.4
SPTA1-203ENST00000465741 ZMYND10O75800 440 aa12.58□□□□□ -0.4
SPTA1-203ENST00000465741 PPP4R3BQ5MIZ7 849 aa12.58□□□□□ -0.4
SPTA1-203ENST00000465741 KCTD12Q96CX2 325 aaKnown RBP12.55□□□□□ -0.4
SPTA1-203ENST00000465741 KCNK17Q96T54 332 aa12.54□□□□□ -0.4
SPTA1-203ENST00000465741 BARGINQ6ZT62 677 aa12.53□□□□□ -0.4
SPTA1-203ENST00000465741 DDX12PQ92771 950 aa12.52□□□□□ -0.41
SPTA1-203ENST00000465741 SLC24A3Q9HC58 644 aa12.52□□□□□ -0.41
SPTA1-203ENST00000465741 OSBPP22059 807 aa12.5□□□□□ -0.41
SPTA1-203ENST00000465741 VPS9D1Q9Y2B5 631 aa12.5□□□□□ -0.41
SPTA1-203ENST00000465741 ZCCHC6Q5VYS8 1495 aaKnown RBP12.5□□□□□ -0.41
SPTA1-203ENST00000465741 ANO8Q9HCE9 1232 aaPredicted RBP12.49□□□□□ -0.41
SPTA1-203ENST00000465741 KRI1Q8N9T8 703 aaKnown RBP12.48□□□□□ -0.41
SPTA1-203ENST00000465741 NUTM2FA1L443 756 aa12.47□□□□□ -0.41
SPTA1-203ENST00000465741 PHF14O94880 888 aa12.45□□□□□ -0.42
SPTA1-203ENST00000465741 EPAS1Q99814 870 aa12.45□□□□□ -0.42
SPTA1-203ENST00000465741 AK7Q96M32 723 aa12.44□□□□□ -0.42
SPTA1-203ENST00000465741 ZNF454Q8N9F8 522 aa12.43□□□□□ -0.42
SPTA1-203ENST00000465741 BCL2L12Q9HB09 334 aa12.43□□□□□ -0.42
SPTA1-203ENST00000465741 BHMG1C9JSJ3 638 aaPredicted RBP12.42□□□□□ -0.42
SPTA1-203ENST00000465741 FCHSD2O94868 740 aa12.42□□□□□ -0.42
SPTA1-203ENST00000465741 GPR37O15354 613 aa12.41□□□□□ -0.42
SPTA1-203ENST00000465741 FOSBP53539 338 aa12.41□□□□□ -0.42
SPTA1-203ENST00000465741 PTPN5P54829 565 aa12.41□□□□□ -0.42
SPTA1-203ENST00000465741 SLC4A5Q9BY07 1137 aa12.41□□□□□ -0.42
SPTA1-203ENST00000465741 HIC1Q14526 733 aa12.4□□□□□ -0.42
SPTA1-203ENST00000465741 STAC3Q96MF2 364 aa12.4□□□□□ -0.42
SPTA1-203ENST00000465741 BRPF1P55201 1214 aaPredicted RBP12.39□□□□□ -0.43
SPTA1-203ENST00000465741 NEUROD2Q15784 382 aa12.39□□□□□ -0.43
SPTA1-203ENST00000465741 GNPATO15228 680 aa12.38□□□□□ -0.43
SPTA1-203ENST00000465741 EN1Q05925 392 aaPredicted RBP12.38□□□□□ -0.43
SPTA1-203ENST00000465741 TYW1BQ6NUM6 668 aa12.38□□□□□ -0.43
SPTA1-203ENST00000465741 JPH4Q96JJ6 628 aa12.38□□□□□ -0.43
SPTA1-203ENST00000465741 ZBED2Q9BTP6 218 aa12.38□□□□□ -0.43
SPTA1-203ENST00000465741 TMEM132AQ24JP5 1023 aa12.37□□□□□ -0.43
SPTA1-203ENST00000465741 FBXW7Q969H0 707 aa12.37□□□□□ -0.43
SPTA1-203ENST00000465741 KCNH8Q96L42 1107 aa12.37□□□□□ -0.43
SPTA1-203ENST00000465741 MAP3K7O43318 606 aa12.36□□□□□ -0.43
SPTA1-203ENST00000465741 MAP2K5Q13163 448 aa12.36□□□□□ -0.43
SPTA1-203ENST00000465741 THSD4Q6ZMP0 1018 aa12.36□□□□□ -0.43
SPTA1-203ENST00000465741 MINK1Q8N4C8 1332 aaPredicted RBP12.36□□□□□ -0.43
SPTA1-203ENST00000465741 PCDHGA10Q9Y5H3 936 aa12.35□□□□□ -0.43
SPTA1-203ENST00000465741 PRIM1P49642 420 aaKnown RBP12.34□□□□□ -0.43
SPTA1-203ENST00000465741 PTGDRQ13258 359 aa12.34□□□□□ -0.43
SPTA1-203ENST00000465741 IFFO2Q5TF58 517 aa12.33□□□□□ -0.44
SPTA1-203ENST00000465741 PTPREP23469 700 aa12.32□□□□□ -0.44
SPTA1-203ENST00000465741 ADAM33Q9BZ11 813 aa12.32□□□□□ -0.44
SPTA1-203ENST00000465741 DCAF1Q9Y4B6 1507 aa12.32□□□□□ -0.44
SPTA1-203ENST00000465741 RBM33Q96EV2 1170 aaKnown RBP12.31□□□□□ -0.44
SPTA1-203ENST00000465741 TRIM66O15016 1216 aa12.3□□□□□ -0.44
SPTA1-203ENST00000465741 IRF6O14896 467 aa12.29□□□□□ -0.44
SPTA1-203ENST00000465741 ZDHHC16Q969W1 377 aa12.29□□□□□ -0.44
SPTA1-203ENST00000465741 DAXXQ9UER7 740 aaPredicted RBP12.29□□□□□ -0.44
SPTA1-203ENST00000465741 WNT2BQ93097 391 aa12.28□□□□□ -0.44
SPTA1-203ENST00000465741 CCDC102AQ96A19 550 aa12.28□□□□□ -0.44
SPTA1-203ENST00000465741 A0A0G2JS52 829 aa12.27□□□□□ -0.45
SPTA1-203ENST00000465741 CERKQ8TCT0 537 aa12.27□□□□□ -0.45
SPTA1-203ENST00000465741 CDHR5Q9HBB8 845 aa12.27□□□□□ -0.45
SPTA1-203ENST00000465741 PDE4DQ08499 809 aa12.26□□□□□ -0.45
SPTA1-203ENST00000465741 MRPL50Q8N5N7 158 aaKnown RBP12.26□□□□□ -0.45
SPTA1-203ENST00000465741 TSR1Q2NL82 804 aaKnown RBP12.25□□□□□ -0.45
SPTA1-203ENST00000465741 SHROOM4Q9ULL8 1493 aa12.25□□□□□ -0.45
SPTA1-203ENST00000465741 RGS20O76081 388 aa12.24□□□□□ -0.45
SPTA1-203ENST00000465741 NPDC1Q9NQX5 325 aaPredicted RBP12.24□□□□□ -0.45
SPTA1-203ENST00000465741 FECHP22830 423 aa12.23□□□□□ -0.45
SPTA1-203ENST00000465741 MYO15BQ96JP2 1530 aa12.22□□□□□ -0.45
SPTA1-203ENST00000465741 C6orf132Q5T0Z8 1188 aa12.22□□□□□ -0.45
SPTA1-203ENST00000465741 NACADO15069 1562 aa12.22□□□□□ -0.45
SPTA1-203ENST00000465741 GOLGA8CPA6NN73 597 aa12.21□□□□□ -0.45
SPTA1-203ENST00000465741 AMHR2Q16671 573 aa12.21□□□□□ -0.45
SPTA1-203ENST00000465741 KDM4CQ9H3R0 1056 aa12.2□□□□□ -0.46
SPTA1-203ENST00000465741 COL9A1P20849 921 aa12.19□□□□□ -0.46
SPTA1-203ENST00000465741 PROX2Q3B8N5 592 aa12.19□□□□□ -0.46
SPTA1-203ENST00000465741 GPBP1L1Q9HC44 474 aaPredicted RBP12.19□□□□□ -0.46
SPTA1-203ENST00000465741 NBPF3Q9H094 633 aa12.18□□□□□ -0.46
SPTA1-203ENST00000465741 RBM27Q9P2N5 1060 aaKnown RBP12.18□□□□□ -0.46
SPTA1-203ENST00000465741 PPP1R3GB7ZBB8 358 aa12.17□□□□□ -0.46
SPTA1-203ENST00000465741 IRX2Q9BZI1 471 aaPredicted RBP12.16□□□□□ -0.46
SPTA1-203ENST00000465741 RB1CC1Q8TDY2 1594 aa12.15□□□□□ -0.46
SPTA1-203ENST00000465741 GTF3C3Q9Y5Q9 886 aa12.15□□□□□ -0.46
SPTA1-203ENST00000465741 TTLL12Q14166 644 aaPredicted RBP12.14□□□□□ -0.47
SPTA1-203ENST00000465741 RABGEF1Q9UJ41 708 aa12.14□□□□□ -0.47
SPTA1-203ENST00000465741 ITGBL1O95965 494 aaPredicted RBP12.12□□□□□ -0.47
SPTA1-203ENST00000465741 OATP04181 439 aa12.12□□□□□ -0.47
SPTA1-203ENST00000465741 BCAMP50895 628 aa12.12□□□□□ -0.47
SPTA1-203ENST00000465741 PADI6Q6TGC4 694 aa12.12□□□□□ -0.47
SPTA1-203ENST00000465741 PARP9Q8IXQ6 854 aa12.12□□□□□ -0.47
SPTA1-203ENST00000465741 PRSS12P56730 875 aa12.11□□□□□ -0.47
SPTA1-203ENST00000465741 CLCN1P35523 988 aa12.09□□□□□ -0.47
SPTA1-203ENST00000465741 CDCA7LQ96GN5 454 aa12.09□□□□□ -0.47
SPTA1-203ENST00000465741 DDRGK1Q96HY6 314 aa12.09□□□□□ -0.47
SPTA1-203ENST00000465741 TTC13Q8NBP0 860 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms