RNA–Protein interactions for RNA: ENST00000465669.1

RAPH1-212, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

TSL 2

Gene RAPH1, Length 360 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-212ENST00000465669 NCOA1Q15788 1441 aa35.27■■■■□ 3.24
RAPH1-212ENST00000465669 WASHC2CQ9Y4E1 1318 aa35.24■■■■□ 3.23
RAPH1-212ENST00000465669 MROH2AA6NES4 1674 aa35.24■■■■□ 3.23
RAPH1-212ENST00000465669 ADGRL2O95490 1459 aa35.23■■■■□ 3.23
RAPH1-212ENST00000465669 EIF2AK4Q9P2K8 1649 aaKnown RBP35.23■■■■□ 3.23
RAPH1-212ENST00000465669 ERBINQ96RT1 1412 aa35.22■■■■□ 3.23
RAPH1-212ENST00000465669 LMTK3Q96Q04 1460 aa35.22■■■■□ 3.23
RAPH1-212ENST00000465669 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.2■■■■□ 3.23
RAPH1-212ENST00000465669 RRBP1Q9P2E9 1410 aaKnown RBP35.2■■■■□ 3.23
RAPH1-212ENST00000465669 RNF17Q9BXT8 1623 aaKnown RBP35.2■■■■□ 3.23
RAPH1-212ENST00000465669 KDM5DQ9BY66 1539 aa35.18■■■■□ 3.22
RAPH1-212ENST00000465669 HSPA2P54652 639 aa35.18■■■■□ 3.22
RAPH1-212ENST00000465669 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.17■■■■□ 3.223e-6■■□□□ 11.7
RAPH1-212ENST00000465669 MROH1Q8NDA8 1641 aa35.13■■■■□ 3.21
RAPH1-212ENST00000465669 SETD1BQ9UPS6 1966 aaKnown RBP35.13■■■■□ 3.21
RAPH1-212ENST00000465669 PREX1Q8TCU6 1659 aa35.12■■■■□ 3.21
RAPH1-212ENST00000465669 UHRF1BP1Q6BDS2 1440 aa35.11■■■■□ 3.21
RAPH1-212ENST00000465669 FAM135AQ9P2D6 1515 aa35.11■■■■□ 3.21
RAPH1-212ENST00000465669 NPATQ14207 1427 aa35.09■■■■□ 3.21
RAPH1-212ENST00000465669 ABCC3O15438 1527 aa35.09■■■■□ 3.21
RAPH1-212ENST00000465669 ANKRD50Q9ULJ7 1429 aa35.08■■■■□ 3.21
RAPH1-212ENST00000465669 FBXO31Q5XUX0 539 aaPredicted RBP35.08■■■■□ 3.21
RAPH1-212ENST00000465669 ROCK1Q13464 1354 aa35.08■■■■□ 3.21
RAPH1-212ENST00000465669 CEP152O94986 1710 aa35.03■■■■□ 3.2
RAPH1-212ENST00000465669 PZPP20742 1482 aa35.03■■■■□ 3.2
RAPH1-212ENST00000465669 KANK1Q14678 1352 aa35.02■■■■□ 3.2
RAPH1-212ENST00000465669 PRDM15P57071 1507 aaPredicted RBP35.02■■■■□ 3.2
RAPH1-212ENST00000465669 ZC3H13Q5T200 1668 aaKnown RBP35.01■■■■□ 3.19
RAPH1-212ENST00000465669 DEPDC5O75140 1603 aa35■■■■□ 3.19
RAPH1-212ENST00000465669 TNRQ92752 1358 aa34.96■■■■□ 3.19
RAPH1-212ENST00000465669 CAMSAP1Q5T5Y3 1602 aa34.95■■■■□ 3.18
RAPH1-212ENST00000465669 MYO3AQ8NEV4 1616 aa34.92■■■■□ 3.18
RAPH1-212ENST00000465669 CFAP65Q6ZU64 1925 aaKnown RBP34.89■■■■□ 3.18
RAPH1-212ENST00000465669 VWDEQ8N2E2 1590 aa34.88■■■■□ 3.17
RAPH1-212ENST00000465669 ERVK-7P63135 1459 aa34.85■■■■□ 3.17
RAPH1-212ENST00000465669 CEP170BQ9Y4F5 1589 aaPredicted RBP34.85■■■■□ 3.17
RAPH1-212ENST00000465669 ARHGAP31Q2M1Z3 1444 aa34.83■■■■□ 3.17
RAPH1-212ENST00000465669 LMTK2Q8IWU2 1503 aa34.83■■■■□ 3.17
RAPH1-212ENST00000465669 A2ML1A8K2U0 1454 aa34.82■■■■□ 3.16
RAPH1-212ENST00000465669 SPATA31D1Q6ZQQ2 1576 aa34.82■■■■□ 3.16
RAPH1-212ENST00000465669 UNC13BO14795 1591 aa34.81■■■■□ 3.16
RAPH1-212ENST00000465669 ZNF142P52746 1687 aaPredicted RBP34.8■■■■□ 3.16
RAPH1-212ENST00000465669 NAIPQ13075 1403 aa34.8■■■■□ 3.16
RAPH1-212ENST00000465669 NUP155O75694 1391 aa34.77■■■■□ 3.16
RAPH1-212ENST00000465669 NLRP1Q9C000 1473 aa34.75■■■■□ 3.15
RAPH1-212ENST00000465669 EFCAB6Q5THR3 1501 aa34.75■■■■□ 3.15
RAPH1-212ENST00000465669 STRCQ7RTU9 1775 aa34.74■■■■□ 3.15
RAPH1-212ENST00000465669 NCKAP5LQ9HCH0 1330 aa34.72■■■■□ 3.15
RAPH1-212ENST00000465669 GCC2Q8IWJ2 1684 aa34.72■■■■□ 3.15
RAPH1-212ENST00000465669 HFM1A2PYH4 1435 aa34.72■■■■□ 3.15
RAPH1-212ENST00000465669 TET3O43151 1660 aa34.7■■■■□ 3.14
RAPH1-212ENST00000465669 IQGAP3Q86VI3 1631 aa34.67■■■■□ 3.14
RAPH1-212ENST00000465669 UGGT1Q9NYU2 1555 aa34.67■■■■□ 3.14
RAPH1-212ENST00000465669 DMRT2Q9Y5R5 561 aa34.67■■■■□ 3.14
RAPH1-212ENST00000465669 THEMISQ8N1K5 641 aaPredicted RBP34.66■■■■□ 3.14
RAPH1-212ENST00000465669 TRIM52Q96A61 297 aa34.64■■■■□ 3.14
RAPH1-212ENST00000465669 PLA2R1Q13018 1463 aa34.64■■■■□ 3.14
RAPH1-212ENST00000465669 NOS1P29475 1434 aa34.63■■■■□ 3.13
RAPH1-212ENST00000465669 RPRD2Q5VT52 1461 aaKnown RBP34.61■■■■□ 3.13
RAPH1-212ENST00000465669 PKD2Q13563 968 aa34.61■■■■□ 3.13
RAPH1-212ENST00000465669 IDI1Q13907 227 aa34.6■■■■□ 3.13
RAPH1-212ENST00000465669 SYNMO15061 1565 aa34.6■■■■□ 3.13
RAPH1-212ENST00000465669 E9PCH4 1651 aa34.58■■■■□ 3.13
RAPH1-212ENST00000465669 STAG3Q9UJ98 1225 aa34.58■■■■□ 3.13
RAPH1-212ENST00000465669 PTPRTO14522 1441 aa34.57■■■■□ 3.13
RAPH1-212ENST00000465669 PIK3C2BO00750 1634 aa34.55■■■■□ 3.12
RAPH1-212ENST00000465669 ANKLE2Q86XL3 938 aa34.54■■■■□ 3.12
RAPH1-212ENST00000465669 UBR1Q8IWV7 1749 aa34.53■■■■□ 3.12
RAPH1-212ENST00000465669 SLC52A1Q9NWF4 448 aa34.51■■■■□ 3.12
RAPH1-212ENST00000465669 SETD5Q9C0A6 1442 aa34.46■■■■□ 3.11
RAPH1-212ENST00000465669 POLR1AO95602 1720 aaPredicted RBP34.45■■■■□ 3.11
RAPH1-212ENST00000465669 SLC4A1APQ9BWU0 796 aaKnown RBP34.45■■■■□ 3.11
RAPH1-212ENST00000465669 CHGAP10645 457 aaKnown RBP34.44■■■■□ 3.1
RAPH1-212ENST00000465669 NEURL4Q96JN8 1562 aa34.43■■■■□ 3.1
RAPH1-212ENST00000465669 TXNDC2Q86VQ3 553 aa34.42■■■■□ 3.1
RAPH1-212ENST00000465669 ADGRB3O60242 1522 aa34.4■■■■□ 3.1
RAPH1-212ENST00000465669 LTKP29376 864 aa34.4■■■■□ 3.1
RAPH1-212ENST00000465669 ILDR1Q86SU0 546 aaPredicted RBP34.4■■■■□ 3.1
RAPH1-212ENST00000465669 NPHP4O75161 1426 aaPredicted RBP34.38■■■■□ 3.09
RAPH1-212ENST00000465669 TMEM2Q9UHN6 1383 aa34.38■■■■□ 3.09
RAPH1-212ENST00000465669 ARHGAP23Q9P227 1491 aa34.38■■■■□ 3.09
RAPH1-212ENST00000465669 SLIT1O75093 1534 aa34.37■■■■□ 3.09
RAPH1-212ENST00000465669 EID1Q9Y6B2 187 aa34.37■■■■□ 3.09
RAPH1-212ENST00000465669 SCAF11Q99590 1463 aaKnown RBP34.36■■■■□ 3.09
RAPH1-212ENST00000465669 RAB3GAP2Q9H2M9 1393 aa34.35■■■■□ 3.09
RAPH1-212ENST00000465669 ZNF335Q9H4Z2 1342 aaPredicted RBP34.34■■■■□ 3.09
RAPH1-212ENST00000465669 SPHKAPQ2M3C7 1700 aa34.34■■■■□ 3.09
RAPH1-212ENST00000465669 KDM5AP29375 1690 aaKnown RBP34.34■■■■□ 3.09
RAPH1-212ENST00000465669 FOXD1Q16676 465 aa34.33■■■■□ 3.09
RAPH1-212ENST00000465669 MED14O60244 1454 aa34.33■■■■□ 3.09
RAPH1-212ENST00000465669 CERKQ8TCT0 537 aa34.31■■■■□ 3.08
RAPH1-212ENST00000465669 MPHOSPH9Q99550 1183 aa34.31■■■■□ 3.08
RAPH1-212ENST00000465669 MYO5BQ9ULV0 1848 aa34.31■■■■□ 3.08
RAPH1-212ENST00000465669 TMEM131LA2VDJ0 1609 aa34.3■■■■□ 3.08
RAPH1-212ENST00000465669 IQGAP1P46940 1657 aa34.28■■■■□ 3.08
RAPH1-212ENST00000465669 SENP3Q9H4L4 574 aaPredicted RBP34.27■■■■□ 3.08
RAPH1-212ENST00000465669 LTBP4Q8N2S1 1624 aa34.25■■■■□ 3.07
RAPH1-212ENST00000465669 RIMS2Q9UQ26 1411 aa34.24■■■■□ 3.07
RAPH1-212ENST00000465669 TRPM2O94759 1503 aa34.24■■■■□ 3.07
RAPH1-212ENST00000465669 NUTM2DQ5VT03 806 aaPredicted RBP34.23■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms