RNA–Protein interactions for RNA: ENST00000465656.1

ZNF490-204, Transcript of zinc finger protein 490, humanhuman

TSL 4

Gene ZNF490, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF490-204ENST00000465656 DEPDC5O75140 1603 aa21.15■□□□□ 0.98
ZNF490-204ENST00000465656 SYNMO15061 1565 aa21.14■□□□□ 0.98
ZNF490-204ENST00000465656 SYCP2Q9BX26 1530 aa21.14■□□□□ 0.97
ZNF490-204ENST00000465656 IQGAP1P46940 1657 aa21.13■□□□□ 0.97
ZNF490-204ENST00000465656 UPF1Q92900 1129 aaKnown RBP eCLIP21.12■□□□□ 0.97
ZNF490-204ENST00000465656 LRRIQ1Q96JM4 1722 aa21.12■□□□□ 0.97
ZNF490-204ENST00000465656 FAM135AQ9P2D6 1515 aa21.11■□□□□ 0.97
ZNF490-204ENST00000465656 EEA1Q15075 1411 aa21.1■□□□□ 0.97
ZNF490-204ENST00000465656 UGGT1Q9NYU2 1555 aa21.1■□□□□ 0.97
ZNF490-204ENST00000465656 INO80Q9ULG1 1556 aaPredicted RBP21.09■□□□□ 0.97
ZNF490-204ENST00000465656 ADGBQ8N7X0 1667 aa21.06■□□□□ 0.96
ZNF490-204ENST00000465656 FAM135BQ49AJ0 1406 aa21.06■□□□□ 0.96
ZNF490-204ENST00000465656 PZPP20742 1482 aa21.06■□□□□ 0.96
ZNF490-204ENST00000465656 NLRP1Q9C000 1473 aa21.06■□□□□ 0.96
ZNF490-204ENST00000465656 ARHGAP35Q9NRY4 1499 aa21.05■□□□□ 0.96
ZNF490-204ENST00000465656 MIA2Q96PC5 1412 aa21.04■□□□□ 0.96
ZNF490-204ENST00000465656 UBTFP17480 764 aaKnown RBP21.03■□□□□ 0.96
ZNF490-204ENST00000465656 KIAA1107Q9UPP5 1409 aa21.03■□□□□ 0.96
ZNF490-204ENST00000465656 PLEKHH2Q8IVE3 1493 aa21.01■□□□□ 0.95
ZNF490-204ENST00000465656 WASHC2CQ9Y4E1 1318 aa21.01■□□□□ 0.95
ZNF490-204ENST00000465656 EHMT2Q96KQ7 1210 aa21■□□□□ 0.95
ZNF490-204ENST00000465656 CCDC18Q5T9S5 1454 aa21■□□□□ 0.95
ZNF490-204ENST00000465656 GPATCH8Q9UKJ3 1502 aaKnown RBP20.99■□□□□ 0.95
ZNF490-204ENST00000465656 TRIM52Q96A61 297 aa20.99■□□□□ 0.95
ZNF490-204ENST00000465656 CFDP1Q9UEE9 299 aaPredicted RBP20.99■□□□□ 0.95
ZNF490-204ENST00000465656 KIF3BO15066 747 aa20.98■□□□□ 0.95
ZNF490-204ENST00000465656 XIRP1Q702N8 1843 aaKnown RBP20.98■□□□□ 0.95
ZNF490-204ENST00000465656 KDM5DQ9BY66 1539 aa20.98■□□□□ 0.95
ZNF490-204ENST00000465656 SRCAPQ6ZRS2 3230 aa20.97■□□□□ 0.95
ZNF490-204ENST00000465656 DHX29Q7Z478 1369 aaKnown RBP20.96■□□□□ 0.95
ZNF490-204ENST00000465656 ZC3H13Q5T200 1668 aaKnown RBP20.94■□□□□ 0.94
ZNF490-204ENST00000465656 ROBO1Q9Y6N7 1651 aa20.94■□□□□ 0.94
ZNF490-204ENST00000465656 ZNF772Q68DY9 489 aaPredicted RBP20.91■□□□□ 0.94
ZNF490-204ENST00000465656 CHIC1Q5VXU3 224 aa20.9■□□□□ 0.94
ZNF490-204ENST00000465656 CASKIN1Q8WXD9 1431 aa20.89■□□□□ 0.94
ZNF490-204ENST00000465656 JCADQ9P266 1359 aa20.89■□□□□ 0.93
ZNF490-204ENST00000465656 MEX3CQ5U5Q3 659 aaKnown RBP20.89■□□□□ 0.93
ZNF490-204ENST00000465656 SCAF11Q99590 1463 aaKnown RBP20.88■□□□□ 0.93
ZNF490-204ENST00000465656 RTEL1-TNFRSF6BF6WH68 1400 aa20.87■□□□□ 0.93
ZNF490-204ENST00000465656 CCNB3Q8WWL7 1395 aa20.87■□□□□ 0.93
ZNF490-204ENST00000465656 TMEM94Q12767 1356 aa20.86■□□□□ 0.93
ZNF490-204ENST00000465656 TXNDC2Q86VQ3 553 aa20.86■□□□□ 0.93
ZNF490-204ENST00000465656 PHLPP1O60346 1717 aa20.85■□□□□ 0.93
ZNF490-204ENST00000465656 RXRBP28702 533 aa20.85■□□□□ 0.93
ZNF490-204ENST00000465656 LTKP29376 864 aa20.84■□□□□ 0.93
ZNF490-204ENST00000465656 ZNF644Q9H582 1327 aaPredicted RBP20.83■□□□□ 0.93
ZNF490-204ENST00000465656 LRRC9Q6ZRR7 1453 aa20.83■□□□□ 0.93
ZNF490-204ENST00000465656 PROSER2Q86WR7 435 aaPredicted RBP20.81■□□□□ 0.92
ZNF490-204ENST00000465656 EID1Q9Y6B2 187 aa20.81■□□□□ 0.92
ZNF490-204ENST00000465656 RBM33Q96EV2 1170 aaKnown RBP20.8■□□□□ 0.92
ZNF490-204ENST00000465656 UBR1Q8IWV7 1749 aa20.8■□□□□ 0.92
ZNF490-204ENST00000465656 MBD5Q9P267 1494 aa20.79■□□□□ 0.92
ZNF490-204ENST00000465656 SPATA31A6Q5VVP1 1343 aa20.78■□□□□ 0.92
ZNF490-204ENST00000465656 SLAIN2Q9P270 581 aa20.78■□□□□ 0.92
ZNF490-204ENST00000465656 LRP6O75581 1613 aa20.76■□□□□ 0.91
ZNF490-204ENST00000465656 KCNA6P17658 529 aa20.76■□□□□ 0.91
ZNF490-204ENST00000465656 ERVK-7P63135 1459 aa20.75■□□□□ 0.91
ZNF490-204ENST00000465656 FYCO1Q9BQS8 1478 aa20.75■□□□□ 0.91
ZNF490-204ENST00000465656 CDK12Q9NYV4 1490 aaPredicted RBP20.75■□□□□ 0.91
ZNF490-204ENST00000465656 MAP3K1Q13233 1512 aa20.74■□□□□ 0.91
ZNF490-204ENST00000465656 NCOA2Q15596 1464 aa20.74■□□□□ 0.91
ZNF490-204ENST00000465656 ARHGAP23Q9P227 1491 aa20.74■□□□□ 0.91
ZNF490-204ENST00000465656 SLIT1O75093 1534 aa20.73■□□□□ 0.91
ZNF490-204ENST00000465656 MSH6P52701 1360 aa20.73■□□□□ 0.91
ZNF490-204ENST00000465656 CFAP65Q6ZU64 1925 aaKnown RBP20.72■□□□□ 0.91
ZNF490-204ENST00000465656 FOXD1Q16676 465 aa20.71■□□□□ 0.91
ZNF490-204ENST00000465656 ABCC3O15438 1527 aa20.7■□□□□ 0.9
ZNF490-204ENST00000465656 ZRANB1Q9UGI0 708 aa20.7■□□□□ 0.9
ZNF490-204ENST00000465656 COL16A1Q07092 1604 aaPredicted RBP20.7■□□□□ 0.9
ZNF490-204ENST00000465656 FGD6Q6ZV73 1430 aa20.7■□□□□ 0.9
ZNF490-204ENST00000465656 MTUS2Q5JR59 1369 aa20.69■□□□□ 0.9
ZNF490-204ENST00000465656 PRDM15P57071 1507 aaPredicted RBP20.68■□□□□ 0.9
ZNF490-204ENST00000465656 SLC26A8Q96RN1 970 aa20.67■□□□□ 0.9
ZNF490-204ENST00000465656 CCDC141Q6ZP82 1450 aa20.67■□□□□ 0.9
ZNF490-204ENST00000465656 NUTM2BA6NNL0 878 aaPredicted RBP20.66■□□□□ 0.9
ZNF490-204ENST00000465656 NUTM2EB1AL46 878 aaPredicted RBP20.66■□□□□ 0.9
ZNF490-204ENST00000465656 RSPH4AQ5TD94 716 aa20.66■□□□□ 0.9
ZNF490-204ENST00000465656 NUTM2DQ5VT03 806 aaPredicted RBP20.66■□□□□ 0.9
ZNF490-204ENST00000465656 NUTM2AQ8IVF1 878 aaPredicted RBP20.66■□□□□ 0.9
ZNF490-204ENST00000465656 STAG3Q9UJ98 1225 aa20.65■□□□□ 0.9
ZNF490-204ENST00000465656 TIAM1Q13009 1591 aa20.64■□□□□ 0.9
ZNF490-204ENST00000465656 TMEM2Q9UHN6 1383 aa20.63■□□□□ 0.89
ZNF490-204ENST00000465656 NKTRP30414 1462 aaKnown RBP20.62■□□□□ 0.89
ZNF490-204ENST00000465656 AFF2P51816 1311 aa20.62■□□□□ 0.89
ZNF490-204ENST00000465656 SHPRHQ149N8 1683 aa20.61■□□□□ 0.89
ZNF490-204ENST00000465656 TSPY4P0CV99 314 aa20.61■□□□□ 0.89
ZNF490-204ENST00000465656 TSPY10P0CW01 314 aa20.61■□□□□ 0.89
ZNF490-204ENST00000465656 RGS12O14924 1447 aa20.6■□□□□ 0.89
ZNF490-204ENST00000465656 RBM6P78332 1123 aaKnown RBP20.59■□□□□ 0.89
ZNF490-204ENST00000465656 BCANQ96GW7 911 aa20.59■□□□□ 0.89
ZNF490-204ENST00000465656 QTRT2Q9H974 415 aaKnown RBP20.58■□□□□ 0.89
ZNF490-204ENST00000465656 CEP152O94986 1710 aa20.58■□□□□ 0.88
ZNF490-204ENST00000465656 NWD1Q149M9 1564 aa20.56■□□□□ 0.88
ZNF490-204ENST00000465656 SETBP1Q9Y6X0 1596 aa20.56■□□□□ 0.88
ZNF490-204ENST00000465656 TET3O43151 1660 aa20.56■□□□□ 0.88
ZNF490-204ENST00000465656 PIK3C2BO00750 1634 aa20.56■□□□□ 0.88
ZNF490-204ENST00000465656 C14orf37Q86TY3 774 aa20.55■□□□□ 0.88
ZNF490-204ENST00000465656 ATAD2Q6PL18 1390 aa20.55■□□□□ 0.88
ZNF490-204ENST00000465656 CAMSAP2Q08AD1 1489 aa20.55■□□□□ 0.88
ZNF490-204ENST00000465656 KDM5AP29375 1690 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms