RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 DUOX2Q9NRD8 1548 aa24.09■■□□□ 1.45
SCAP-209ENST00000465628 FAM135AQ9P2D6 1515 aa24.09■■□□□ 1.45
SCAP-209ENST00000465628 FAM50AQ14320 339 aaKnown RBP24.08■■□□□ 1.45
SCAP-209ENST00000465628 MYO3AQ8NEV4 1616 aa24.08■■□□□ 1.45
SCAP-209ENST00000465628 RNF17Q9BXT8 1623 aaKnown RBP24.07■■□□□ 1.44
SCAP-209ENST00000465628 KIF15Q9NS87 1388 aa24.07■■□□□ 1.44
SCAP-209ENST00000465628 WASHC2CQ9Y4E1 1318 aa24.06■■□□□ 1.44
SCAP-209ENST00000465628 PTPRKQ15262 1439 aa24.04■■□□□ 1.44
SCAP-209ENST00000465628 ZC3H13Q5T200 1668 aaKnown RBP24.03■■□□□ 1.44
SCAP-209ENST00000465628 RRP7BPQ9NSQ0 103 aa24.02■■□□□ 1.44
SCAP-209ENST00000465628 CHIC2Q9UKJ5 165 aa24.01■■□□□ 1.43
SCAP-209ENST00000465628 ZNF142P52746 1687 aaPredicted RBP24.01■■□□□ 1.43
SCAP-209ENST00000465628 ANKRD30AQ9BXX3 1397 aa24■■□□□ 1.43
SCAP-209ENST00000465628 ERBINQ96RT1 1412 aa24■■□□□ 1.43
SCAP-209ENST00000465628 CEP170BQ9Y4F5 1589 aaPredicted RBP23.99■■□□□ 1.43
SCAP-209ENST00000465628 PPARGC1BQ86YN6 1023 aaKnown RBP23.99■■□□□ 1.43
SCAP-209ENST00000465628 PZPP20742 1482 aa23.99■■□□□ 1.43
SCAP-209ENST00000465628 CEP152O94986 1710 aa23.98■■□□□ 1.43
SCAP-209ENST00000465628 ABCC3O15438 1527 aa23.98■■□□□ 1.43
SCAP-209ENST00000465628 STRCQ7RTU9 1775 aa23.98■■□□□ 1.43
SCAP-209ENST00000465628 CAMSAP1Q5T5Y3 1602 aa23.96■■□□□ 1.43
SCAP-209ENST00000465628 MROH1Q8NDA8 1641 aa23.96■■□□□ 1.43
SCAP-209ENST00000465628 TNRQ92752 1358 aa23.95■■□□□ 1.42
SCAP-209ENST00000465628 DMRT2Q9Y5R5 561 aa23.93■■□□□ 1.42
SCAP-209ENST00000465628 PRDM15P57071 1507 aaPredicted RBP23.93■■□□□ 1.42
SCAP-209ENST00000465628 NCOA1Q15788 1441 aa23.93■■□□□ 1.42
SCAP-209ENST00000465628 FBXO31Q5XUX0 539 aaPredicted RBP23.91■■□□□ 1.42
SCAP-209ENST00000465628 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.91■■□□□ 1.42
SCAP-209ENST00000465628 A2ML1A8K2U0 1454 aa23.9■■□□□ 1.42
SCAP-209ENST00000465628 ADGRL2O95490 1459 aa23.9■■□□□ 1.42
SCAP-209ENST00000465628 KANK1Q14678 1352 aa23.9■■□□□ 1.42
SCAP-209ENST00000465628 DEPDC5O75140 1603 aa23.89■■□□□ 1.42
SCAP-209ENST00000465628 ILDR1Q86SU0 546 aaPredicted RBP23.88■■□□□ 1.41
SCAP-209ENST00000465628 PLA2R1Q13018 1463 aa23.85■■□□□ 1.41
SCAP-209ENST00000465628 ERVK-7P63135 1459 aa23.84■■□□□ 1.41
SCAP-209ENST00000465628 ITGAEP38570 1179 aa23.84■■□□□ 1.41
SCAP-209ENST00000465628 CFAP65Q6ZU64 1925 aaKnown RBP23.84■■□□□ 1.41
SCAP-209ENST00000465628 PTPRTO14522 1441 aa23.84■■□□□ 1.41
SCAP-209ENST00000465628 SPATA31D1Q6ZQQ2 1576 aa23.83■■□□□ 1.41
SCAP-209ENST00000465628 NLRP1Q9C000 1473 aa23.83■■□□□ 1.41
SCAP-209ENST00000465628 ANKRD50Q9ULJ7 1429 aa23.82■■□□□ 1.4
SCAP-209ENST00000465628 NCKAP5LQ9HCH0 1330 aa23.82■■□□□ 1.4
SCAP-209ENST00000465628 UGGT1Q9NYU2 1555 aa23.8■■□□□ 1.4
SCAP-209ENST00000465628 POLR1AO95602 1720 aaPredicted RBP23.79■■□□□ 1.4
SCAP-209ENST00000465628 PKD2Q13563 968 aa23.78■■□□□ 1.4
SCAP-209ENST00000465628 FBXO41Q8TF61 875 aa23.75■■□□□ 1.39
SCAP-209ENST00000465628 CERKQ8TCT0 537 aa23.74■■□□□ 1.39
SCAP-209ENST00000465628 ROCK1Q13464 1354 aa23.74■■□□□ 1.39
SCAP-209ENST00000465628 ARHGAP31Q2M1Z3 1444 aa23.74■■□□□ 1.39
SCAP-209ENST00000465628 EFCAB6Q5THR3 1501 aa23.74■■□□□ 1.39
SCAP-209ENST00000465628 LMTK2Q8IWU2 1503 aa23.74■■□□□ 1.39
SCAP-209ENST00000465628 VWDEQ8N2E2 1590 aa23.74■■□□□ 1.39
SCAP-209ENST00000465628 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.73■■□□□ 1.39
SCAP-209ENST00000465628 THEMISQ8N1K5 641 aaPredicted RBP23.72■■□□□ 1.39
SCAP-209ENST00000465628 UNC13BO14795 1591 aa23.7■■□□□ 1.38
SCAP-209ENST00000465628 RRBP1Q9P2E9 1410 aaKnown RBP23.69■■□□□ 1.38
SCAP-209ENST00000465628 UBR1Q8IWV7 1749 aa23.68■■□□□ 1.38
SCAP-209ENST00000465628 NEURL4Q96JN8 1562 aa23.68■■□□□ 1.38
SCAP-209ENST00000465628 TET3O43151 1660 aa23.67■■□□□ 1.38
SCAP-209ENST00000465628 ANKLE2Q86XL3 938 aa23.67■■□□□ 1.38
SCAP-209ENST00000465628 PIK3C2BO00750 1634 aa23.66■■□□□ 1.38
SCAP-209ENST00000465628 GCC2Q8IWJ2 1684 aa23.65■■□□□ 1.38
SCAP-209ENST00000465628 STAG3Q9UJ98 1225 aa23.65■■□□□ 1.38
SCAP-209ENST00000465628 ZNF335Q9H4Z2 1342 aaPredicted RBP23.63■■□□□ 1.37
SCAP-209ENST00000465628 LTBP4Q8N2S1 1624 aa23.63■■□□□ 1.37
SCAP-209ENST00000465628 SYNMO15061 1565 aa23.62■■□□□ 1.37
SCAP-209ENST00000465628 IQGAP1P46940 1657 aa23.62■■□□□ 1.37
SCAP-209ENST00000465628 RPRD2Q5VT52 1461 aaKnown RBP23.62■■□□□ 1.37
SCAP-209ENST00000465628 NPHP4O75161 1426 aaPredicted RBP23.61■■□□□ 1.37
SCAP-209ENST00000465628 IQGAP3Q86VI3 1631 aa23.61■■□□□ 1.37
SCAP-209ENST00000465628 SCAF11Q99590 1463 aaKnown RBP23.57■■□□□ 1.36
SCAP-209ENST00000465628 NUP155O75694 1391 aa23.57■■□□□ 1.36
SCAP-209ENST00000465628 ADGRB3O60242 1522 aa23.57■■□□□ 1.36
SCAP-209ENST00000465628 NOS1P29475 1434 aa23.57■■□□□ 1.36
SCAP-209ENST00000465628 E9PCH4 1651 aa23.56■■□□□ 1.36
SCAP-209ENST00000465628 MED14O60244 1454 aa23.56■■□□□ 1.36
SCAP-209ENST00000465628 KDM5AP29375 1690 aaKnown RBP23.55■■□□□ 1.36
SCAP-209ENST00000465628 SLIT1O75093 1534 aa23.54■■□□□ 1.36
SCAP-209ENST00000465628 EID1Q9Y6B2 187 aa23.54■■□□□ 1.36
SCAP-209ENST00000465628 IQSEC2Q5JU85 1478 aa23.53■■□□□ 1.36
SCAP-209ENST00000465628 IDI1Q13907 227 aa23.52■■□□□ 1.36
SCAP-209ENST00000465628 ARHGAP23Q9P227 1491 aa23.51■■□□□ 1.35
SCAP-209ENST00000465628 TXNDC2Q86VQ3 553 aa23.51■■□□□ 1.35
SCAP-209ENST00000465628 TMEM2Q9UHN6 1383 aa23.51■■□□□ 1.35
SCAP-209ENST00000465628 SLC52A1Q9NWF4 448 aa23.5■■□□□ 1.35
SCAP-209ENST00000465628 CPS1P31327 1500 aa23.49■■□□□ 1.35
SCAP-209ENST00000465628 NAIPQ13075 1403 aa23.48■■□□□ 1.35
SCAP-209ENST00000465628 MYO5BQ9ULV0 1848 aa23.47■■□□□ 1.35
SCAP-209ENST00000465628 CHGAP10645 457 aaKnown RBP23.46■■□□□ 1.35
SCAP-209ENST00000465628 LTKP29376 864 aa23.45■■□□□ 1.34
SCAP-209ENST00000465628 HFM1A2PYH4 1435 aa23.44■■□□□ 1.34
SCAP-209ENST00000465628 SPHKAPQ2M3C7 1700 aa23.44■■□□□ 1.34
SCAP-209ENST00000465628 BCANQ96GW7 911 aa23.42■■□□□ 1.34
SCAP-209ENST00000465628 TMEM131LA2VDJ0 1609 aa23.41■■□□□ 1.34
SCAP-209ENST00000465628 UBAP1LF5GYI3 381 aa23.41■■□□□ 1.34
SCAP-209ENST00000465628 PPP1R15AO75807 674 aaPredicted RBP23.41■■□□□ 1.34
SCAP-209ENST00000465628 TRIM52Q96A61 297 aa23.41■■□□□ 1.34
SCAP-209ENST00000465628 SENP3Q9H4L4 574 aaPredicted RBP23.38■■□□□ 1.33
SCAP-209ENST00000465628 STRCP1A6NGW2 1772 aa23.37■■□□□ 1.33
SCAP-209ENST00000465628 RIMS2Q9UQ26 1411 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms