RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 PREX1Q8TCU6 1659 aa15.44■□□□□ 0.06
CTNNB1-211ENST00000465552 CFAP65Q6ZU64 1925 aaKnown RBP15.43■□□□□ 0.06
CTNNB1-211ENST00000465552 RTEL1-TNFRSF6BF6WH68 1400 aa15.43■□□□□ 0.06
CTNNB1-211ENST00000465552 EIF2AK4Q9P2K8 1649 aaKnown RBP15.42■□□□□ 0.06
CTNNB1-211ENST00000465552 DAPK1P53355 1430 aa15.41■□□□□ 0.06
CTNNB1-211ENST00000465552 SHANK2Q9UPX8 1470 aa15.4■□□□□ 0.06
CTNNB1-211ENST00000465552 RNF17Q9BXT8 1623 aaKnown RBP15.39■□□□□ 0.05
CTNNB1-211ENST00000465552 ABCC5O15440 1437 aa15.38■□□□□ 0.05
CTNNB1-211ENST00000465552 TSPY4P0CV99 314 aa15.37■□□□□ 0.05
CTNNB1-211ENST00000465552 TSPY10P0CW01 314 aa15.37■□□□□ 0.05
CTNNB1-211ENST00000465552 FAM50AQ14320 339 aaKnown RBP15.37■□□□□ 0.05
CTNNB1-211ENST00000465552 ZC3H13Q5T200 1668 aaKnown RBP15.36■□□□□ 0.05
CTNNB1-211ENST00000465552 RSPH4AQ5TD94 716 aa15.36■□□□□ 0.05
CTNNB1-211ENST00000465552 SETD1BQ9UPS6 1966 aaKnown RBP15.36■□□□□ 0.05
CTNNB1-211ENST00000465552 MROH1Q8NDA8 1641 aa15.35■□□□□ 0.05
CTNNB1-211ENST00000465552 DHX29Q7Z478 1369 aaKnown RBP15.35■□□□□ 0.05
CTNNB1-211ENST00000465552 DUOX2Q9NRD8 1548 aa15.34■□□□□ 0.05
CTNNB1-211ENST00000465552 CAMSAP1Q5T5Y3 1602 aa15.33■□□□□ 0.04
CTNNB1-211ENST00000465552 CEBPAP49715 358 aaPredicted RBP15.33■□□□□ 0.04
CTNNB1-211ENST00000465552 GGT6Q6P531 493 aa15.33■□□□□ 0.04
CTNNB1-211ENST00000465552 ESF1Q9H501 851 aaKnown RBP15.33■□□□□ 0.04
CTNNB1-211ENST00000465552 KDM5DQ9BY66 1539 aa15.33■□□□□ 0.04
CTNNB1-211ENST00000465552 DEPDC5O75140 1603 aa15.32■□□□□ 0.04
CTNNB1-211ENST00000465552 MYO3AQ8NEV4 1616 aa15.32■□□□□ 0.04
CTNNB1-211ENST00000465552 CHIC2Q9UKJ5 165 aa15.32■□□□□ 0.04
CTNNB1-211ENST00000465552 LMTK3Q96Q04 1460 aa15.32■□□□□ 0.04
CTNNB1-211ENST00000465552 KIF3BO15066 747 aa15.31■□□□□ 0.04
CTNNB1-211ENST00000465552 KIF15Q9NS87 1388 aa15.3■□□□□ 0.04
CTNNB1-211ENST00000465552 CNTLNQ9NXG0 1405 aa15.3■□□□□ 0.04
CTNNB1-211ENST00000465552 ZNF142P52746 1687 aaPredicted RBP15.29■□□□□ 0.04
CTNNB1-211ENST00000465552 ADGRL2O95490 1459 aa15.28■□□□□ 0.04
CTNNB1-211ENST00000465552 PRDM15P57071 1507 aaPredicted RBP15.27■□□□□ 0.04
CTNNB1-211ENST00000465552 RRP7BPQ9NSQ0 103 aa15.27■□□□□ 0.04
CTNNB1-211ENST00000465552 GCC2Q8IWJ2 1684 aa15.27■□□□□ 0.03
CTNNB1-211ENST00000465552 ABCC3O15438 1527 aa15.27■□□□□ 0.03
CTNNB1-211ENST00000465552 FAM135AQ9P2D6 1515 aa15.27■□□□□ 0.03
CTNNB1-211ENST00000465552 PTPRKQ15262 1439 aa15.26■□□□□ 0.03
CTNNB1-211ENST00000465552 ERBINQ96RT1 1412 aa15.26■□□□□ 0.03
CTNNB1-211ENST00000465552 ANKRD30AQ9BXX3 1397 aa15.26■□□□□ 0.03
CTNNB1-211ENST00000465552 ITGAEP38570 1179 aa15.26■□□□□ 0.03
CTNNB1-211ENST00000465552 STRCQ7RTU9 1775 aa15.24■□□□□ 0.03
CTNNB1-211ENST00000465552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.24■□□□□ 0.031e-6■□□□□ 8.5
CTNNB1-211ENST00000465552 NCOA1Q15788 1441 aa15.24■□□□□ 0.03
CTNNB1-211ENST00000465552 ZMYM3Q14202 1370 aa15.24■□□□□ 0.03
CTNNB1-211ENST00000465552 UHRF1BP1Q6BDS2 1440 aa15.23■□□□□ 0.03
CTNNB1-211ENST00000465552 RRBP1Q9P2E9 1410 aaKnown RBP15.23■□□□□ 0.03
CTNNB1-211ENST00000465552 UNC13BO14795 1591 aa15.23■□□□□ 0.03
CTNNB1-211ENST00000465552 HSPA2P54652 639 aa15.22■□□□□ 0.03
CTNNB1-211ENST00000465552 POLR1AO95602 1720 aaPredicted RBP15.21■□□□□ 0.03
CTNNB1-211ENST00000465552 CEP170BQ9Y4F5 1589 aaPredicted RBP15.21■□□□□ 0.03
CTNNB1-211ENST00000465552 PZPP20742 1482 aa15.2■□□□□ 0.02
CTNNB1-211ENST00000465552 WASHC2CQ9Y4E1 1318 aa15.19■□□□□ 0.02
CTNNB1-211ENST00000465552 MYO5BQ9ULV0 1848 aa15.19■□□□□ 0.02
CTNNB1-211ENST00000465552 TET3O43151 1660 aa15.19■□□□□ 0.02
CTNNB1-211ENST00000465552 NPATQ14207 1427 aa15.18■□□□□ 0.02
CTNNB1-211ENST00000465552 VWDEQ8N2E2 1590 aa15.18■□□□□ 0.02
CTNNB1-211ENST00000465552 ANKRD50Q9ULJ7 1429 aa15.17■□□□□ 0.02
CTNNB1-211ENST00000465552 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.17■□□□□ 0.02
CTNNB1-211ENST00000465552 E9PCH4 1651 aa15.16■□□□□ 0.02
CTNNB1-211ENST00000465552 SPATA31D1Q6ZQQ2 1576 aa15.16■□□□□ 0.02
CTNNB1-211ENST00000465552 IQGAP3Q86VI3 1631 aa15.16■□□□□ 0.02
CTNNB1-211ENST00000465552 UBR1Q8IWV7 1749 aa15.15■□□□□ 0.02
CTNNB1-211ENST00000465552 EFCAB6Q5THR3 1501 aa15.15■□□□□ 0.02
CTNNB1-211ENST00000465552 ERVK-7P63135 1459 aa15.14■□□□□ 0.01
CTNNB1-211ENST00000465552 ROCK1Q13464 1354 aa15.13■□□□□ 0.01
CTNNB1-211ENST00000465552 FBXO31Q5XUX0 539 aaPredicted RBP15.13■□□□□ 0.01
CTNNB1-211ENST00000465552 PIK3C2BO00750 1634 aa15.13■□□□□ 0.01
CTNNB1-211ENST00000465552 KANK1Q14678 1352 aa15.12■□□□□ 0.01
CTNNB1-211ENST00000465552 LMTK2Q8IWU2 1503 aa15.12■□□□□ 0.01
CTNNB1-211ENST00000465552 TNRQ92752 1358 aa15.11■□□□□ 0.01
CTNNB1-211ENST00000465552 SPHKAPQ2M3C7 1700 aa15.11■□□□□ 0.01
CTNNB1-211ENST00000465552 SYNMO15061 1565 aa15.11■□□□□ 0.01
CTNNB1-211ENST00000465552 A2ML1A8K2U0 1454 aa15.1■□□□□ 0.01
CTNNB1-211ENST00000465552 KCNA4P22459 653 aa15.09■□□□□ 0.01
CTNNB1-211ENST00000465552 UGGT1Q9NYU2 1555 aa15.08■□□□□ 0
CTNNB1-211ENST00000465552 NAIPQ13075 1403 aa15.06■□□□□ 0
CTNNB1-211ENST00000465552 NLRP1Q9C000 1473 aa15.06■□□□□ 0
CTNNB1-211ENST00000465552 ARHGAP31Q2M1Z3 1444 aa15.05■□□□□ -0
CTNNB1-211ENST00000465552 NEURL4Q96JN8 1562 aa15.05■□□□□ -0
CTNNB1-211ENST00000465552 KDM5AP29375 1690 aaKnown RBP15.04■□□□□ -0
CTNNB1-211ENST00000465552 IQGAP1P46940 1657 aa15.03■□□□□ -0
CTNNB1-211ENST00000465552 PLA2R1Q13018 1463 aa15.02■□□□□ -0
CTNNB1-211ENST00000465552 HFM1A2PYH4 1435 aa15.02■□□□□ -0
CTNNB1-211ENST00000465552 KIF1BO60333 1816 aa15.01□□□□□ -0.01
CTNNB1-211ENST00000465552 ADGRB3O60242 1522 aa15.01□□□□□ -0.01
CTNNB1-211ENST00000465552 RPRD2Q5VT52 1461 aaKnown RBP15.01□□□□□ -0.01
CTNNB1-211ENST00000465552 NUP155O75694 1391 aa15□□□□□ -0.01
CTNNB1-211ENST00000465552 NCKAP5LQ9HCH0 1330 aa14.99□□□□□ -0.01
CTNNB1-211ENST00000465552 NOS1P29475 1434 aa14.99□□□□□ -0.01
CTNNB1-211ENST00000465552 TMEM131LA2VDJ0 1609 aa14.97□□□□□ -0.01
CTNNB1-211ENST00000465552 CLTCL1P53675 1640 aa14.97□□□□□ -0.01
CTNNB1-211ENST00000465552 U3KPZ7 1027 aaPredicted RBP14.96□□□□□ -0.01
CTNNB1-211ENST00000465552 STRCP1A6NGW2 1772 aa14.96□□□□□ -0.02
CTNNB1-211ENST00000465552 PTPRTO14522 1441 aa14.95□□□□□ -0.02
CTNNB1-211ENST00000465552 SLIT1O75093 1534 aa14.93□□□□□ -0.02
CTNNB1-211ENST00000465552 TRIM52Q96A61 297 aa14.93□□□□□ -0.02
CTNNB1-211ENST00000465552 ARHGAP23Q9P227 1491 aa14.91□□□□□ -0.02
CTNNB1-211ENST00000465552 THEMISQ8N1K5 641 aaPredicted RBP14.91□□□□□ -0.02
CTNNB1-211ENST00000465552 STAG3Q9UJ98 1225 aa14.91□□□□□ -0.02
CTNNB1-211ENST00000465552 LTBP4Q8N2S1 1624 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms