RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PLEKHH2Q8IVE3 1493 aa21.8■■□□□ 1.08
HDAC6-215ENST00000465457 TOM1O60784 492 aa21.8■■□□□ 1.08
HDAC6-215ENST00000465457 SENP3Q9H4L4 574 aaPredicted RBP21.8■■□□□ 1.08
HDAC6-215ENST00000465457 FBXO31Q5XUX0 539 aaPredicted RBP21.79■■□□□ 1.08
HDAC6-215ENST00000465457 TIAM1Q13009 1591 aa21.78■■□□□ 1.08
HDAC6-215ENST00000465457 TNRQ92752 1358 aa21.78■■□□□ 1.08
HDAC6-215ENST00000465457 PHF23Q9BUL5 403 aaPredicted RBP21.78■■□□□ 1.08
HDAC6-215ENST00000465457 IQGAP1P46940 1657 aa21.77■■□□□ 1.08
HDAC6-215ENST00000465457 ZNF644Q9H582 1327 aaPredicted RBP21.77■■□□□ 1.07
HDAC6-215ENST00000465457 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.76■■□□□ 1.07
HDAC6-215ENST00000465457 CFDP1Q9UEE9 299 aaPredicted RBP21.76■■□□□ 1.07
HDAC6-215ENST00000465457 PZPP20742 1482 aa21.76■■□□□ 1.07
HDAC6-215ENST00000465457 KDM5DQ9BY66 1539 aa21.75■■□□□ 1.07
HDAC6-215ENST00000465457 MBD5Q9P267 1494 aa21.75■■□□□ 1.07
HDAC6-215ENST00000465457 CCNB3Q8WWL7 1395 aa21.74■■□□□ 1.07
HDAC6-215ENST00000465457 DEPDC5O75140 1603 aa21.74■■□□□ 1.07
HDAC6-215ENST00000465457 RNF17Q9BXT8 1623 aaKnown RBP21.74■■□□□ 1.07
HDAC6-215ENST00000465457 NPHP4O75161 1426 aaPredicted RBP21.72■■□□□ 1.07
HDAC6-215ENST00000465457 UGGT1Q9NYU2 1555 aa21.71■■□□□ 1.07
HDAC6-215ENST00000465457 MED14O60244 1454 aa21.71■■□□□ 1.07
HDAC6-215ENST00000465457 LRRC7Q96NW7 1537 aa21.7■■□□□ 1.06
HDAC6-215ENST00000465457 SYNMO15061 1565 aa21.7■■□□□ 1.06
HDAC6-215ENST00000465457 ZC3H13Q5T200 1668 aaKnown RBP21.69■■□□□ 1.06
HDAC6-215ENST00000465457 DHX29Q7Z478 1369 aaKnown RBP21.68■■□□□ 1.06
HDAC6-215ENST00000465457 XIRP1Q702N8 1843 aaKnown RBP21.67■■□□□ 1.06
HDAC6-215ENST00000465457 RGS17Q9UGC6 210 aaPredicted RBP21.67■■□□□ 1.06
HDAC6-215ENST00000465457 NLRP1Q9C000 1473 aa21.65■■□□□ 1.06
HDAC6-215ENST00000465457 RTEL1-TNFRSF6BF6WH68 1400 aa21.65■■□□□ 1.06
HDAC6-215ENST00000465457 KIF3BO15066 747 aa21.65■■□□□ 1.06
HDAC6-215ENST00000465457 ANKLE2Q86XL3 938 aa21.65■■□□□ 1.06
HDAC6-215ENST00000465457 FAM135AQ9P2D6 1515 aa21.65■■□□□ 1.06
HDAC6-215ENST00000465457 MIA2Q96PC5 1412 aa21.64■■□□□ 1.06
HDAC6-215ENST00000465457 MTUS2Q5JR59 1369 aa21.63■■□□□ 1.05
HDAC6-215ENST00000465457 CEP162Q5TB80 1403 aa21.63■■□□□ 1.05
HDAC6-215ENST00000465457 EHBP1L1Q8N3D4 1523 aa21.62■■□□□ 1.05
HDAC6-215ENST00000465457 CCDC141Q6ZP82 1450 aa21.6■■□□□ 1.05
HDAC6-215ENST00000465457 CFAP65Q6ZU64 1925 aaKnown RBP21.6■■□□□ 1.05
HDAC6-215ENST00000465457 SETD1AO15047 1707 aaKnown RBP21.6■■□□□ 1.05
HDAC6-215ENST00000465457 UBR1Q8IWV7 1749 aa21.59■■□□□ 1.05
HDAC6-215ENST00000465457 CAMSAP2Q08AD1 1489 aa21.58■■□□□ 1.05
HDAC6-215ENST00000465457 WASHC2CQ9Y4E1 1318 aa21.58■■□□□ 1.05
HDAC6-215ENST00000465457 THEMISQ8N1K5 641 aaPredicted RBP21.58■■□□□ 1.05
HDAC6-215ENST00000465457 ABCC3O15438 1527 aa21.56■■□□□ 1.04
HDAC6-215ENST00000465457 CEP152O94986 1710 aa21.56■■□□□ 1.04
HDAC6-215ENST00000465457 MROH1Q8NDA8 1641 aa21.54■■□□□ 1.04
HDAC6-215ENST00000465457 ERVK-7P63135 1459 aa21.53■■□□□ 1.04
HDAC6-215ENST00000465457 NCOA2Q15596 1464 aa21.5■■□□□ 1.03
HDAC6-215ENST00000465457 POTEAQ6S8J7 498 aa21.49■■□□□ 1.03
HDAC6-215ENST00000465457 SCAF11Q99590 1463 aaKnown RBP21.49■■□□□ 1.03
HDAC6-215ENST00000465457 ARHGEF5Q12774 1597 aa21.48■■□□□ 1.03
HDAC6-215ENST00000465457 ROBO1Q9Y6N7 1651 aa21.46■■□□□ 1.03
HDAC6-215ENST00000465457 ARHGAP23Q9P227 1491 aa21.45■■□□□ 1.02
HDAC6-215ENST00000465457 EIF2AK4Q9P2K8 1649 aaKnown RBP21.44■■□□□ 1.02
HDAC6-215ENST00000465457 LTKP29376 864 aa21.43■■□□□ 1.02
HDAC6-215ENST00000465457 SLIT1O75093 1534 aa21.43■■□□□ 1.02
HDAC6-215ENST00000465457 MAST1Q9Y2H9 1570 aa21.41■■□□□ 1.02
HDAC6-215ENST00000465457 MAP3K1Q13233 1512 aa21.41■■□□□ 1.02
HDAC6-215ENST00000465457 PIK3C2BO00750 1634 aa21.4■■□□□ 1.02
HDAC6-215ENST00000465457 FAM135BQ49AJ0 1406 aa21.38■■□□□ 1.01
HDAC6-215ENST00000465457 TXNDC2Q86VQ3 553 aa21.34■■□□□ 1.01
HDAC6-215ENST00000465457 RBM33Q96EV2 1170 aaKnown RBP21.34■■□□□ 1.01
HDAC6-215ENST00000465457 TMEM94Q12767 1356 aa21.34■■□□□ 1.01
HDAC6-215ENST00000465457 TRIM26Q12899 539 aaPredicted RBP21.33■■□□□ 1.01
HDAC6-215ENST00000465457 PRDM15P57071 1507 aaPredicted RBP21.33■■□□□ 1
HDAC6-215ENST00000465457 PHLPP1O60346 1717 aa21.32■■□□□ 1
HDAC6-215ENST00000465457 VPS8Q8N3P4 1428 aa21.31■■□□□ 1
HDAC6-215ENST00000465457 RSPH4AQ5TD94 716 aa21.31■■□□□ 1
HDAC6-215ENST00000465457 TSPY4P0CV99 314 aa21.29■■□□□ 1
HDAC6-215ENST00000465457 TSPY10P0CW01 314 aa21.29■■□□□ 1
HDAC6-215ENST00000465457 NWD1Q149M9 1564 aa21.28■■□□□ 1
HDAC6-215ENST00000465457 TET3O43151 1660 aa21.28■■□□□ 1
HDAC6-215ENST00000465457 TMEM2Q9UHN6 1383 aa21.27■■□□□ 1
HDAC6-215ENST00000465457 CROCC2H7BZ55 1655 aa21.26■□□□□ 0.99
HDAC6-215ENST00000465457 COL16A1Q07092 1604 aaPredicted RBP21.26■□□□□ 0.99
HDAC6-215ENST00000465457 EFCAB6Q5THR3 1501 aa21.25■□□□□ 0.99
HDAC6-215ENST00000465457 DUOX2Q9NRD8 1548 aa21.25■□□□□ 0.99
HDAC6-215ENST00000465457 KDM5AP29375 1690 aaKnown RBP21.25■□□□□ 0.99
HDAC6-215ENST00000465457 ARHGAP31Q2M1Z3 1444 aa21.25■□□□□ 0.99
HDAC6-215ENST00000465457 LRP6O75581 1613 aa21.25■□□□□ 0.99
HDAC6-215ENST00000465457 LRRC9Q6ZRR7 1453 aa21.24■□□□□ 0.99
HDAC6-215ENST00000465457 SLC26A8Q96RN1 970 aa21.22■□□□□ 0.99
HDAC6-215ENST00000465457 EID1Q9Y6B2 187 aa21.22■□□□□ 0.99
HDAC6-215ENST00000465457 NKTRP30414 1462 aaKnown RBP21.21■□□□□ 0.99
HDAC6-215ENST00000465457 PCGF6Q9BYE7 350 aa21.21■□□□□ 0.99
HDAC6-215ENST00000465457 MYO5BQ9ULV0 1848 aa21.2■□□□□ 0.98
HDAC6-215ENST00000465457 KCNA6P17658 529 aa21.19■□□□□ 0.98
HDAC6-215ENST00000465457 PROSER2Q86WR7 435 aaPredicted RBP21.18■□□□□ 0.98
HDAC6-215ENST00000465457 ADGRB3O60242 1522 aa21.18■□□□□ 0.98
HDAC6-215ENST00000465457 KIF15Q9NS87 1388 aa21.17■□□□□ 0.98
HDAC6-215ENST00000465457 CHD2O14647 1828 aaKnown RBP21.16■□□□□ 0.98
HDAC6-215ENST00000465457 JCADQ9P266 1359 aa21.16■□□□□ 0.98
HDAC6-215ENST00000465457 ERBINQ96RT1 1412 aa21.15■□□□□ 0.98
HDAC6-215ENST00000465457 UPF1Q92900 1129 aaKnown RBP eCLIP21.15■□□□□ 0.98
HDAC6-215ENST00000465457 MYOM3Q5VTT5 1437 aa21.13■□□□□ 0.97
HDAC6-215ENST00000465457 MSH6P52701 1360 aa21.13■□□□□ 0.97
HDAC6-215ENST00000465457 IDI1Q13907 227 aa21.13■□□□□ 0.97
HDAC6-215ENST00000465457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.13■□□□□ 0.971e-6■□□□□ 10.5
HDAC6-215ENST00000465457 STAG3Q9UJ98 1225 aa21.13■□□□□ 0.97
HDAC6-215ENST00000465457 TRIM52Q96A61 297 aa21.12■□□□□ 0.97
HDAC6-215ENST00000465457 SHPRHQ149N8 1683 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms