RNA–Protein interactions for RNA: ENST00000465405.1

GABRE-205, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-205ENST00000465405 MAST1Q9Y2H9 1570 aa13.78□□□□□ -0.2
GABRE-205ENST00000465405 PTPN23Q9H3S7 1636 aa13.76□□□□□ -0.21
GABRE-205ENST00000465405 SCAF1Q9H7N4 1312 aaKnown RBP13.76□□□□□ -0.21
GABRE-205ENST00000465405 STRCQ7RTU9 1775 aa13.76□□□□□ -0.21
GABRE-205ENST00000465405 NPATQ14207 1427 aa13.75□□□□□ -0.21
GABRE-205ENST00000465405 ABCC5O15440 1437 aa13.73□□□□□ -0.21
GABRE-205ENST00000465405 PTPRKQ15262 1439 aa13.73□□□□□ -0.21
GABRE-205ENST00000465405 FGD6Q6ZV73 1430 aa13.73□□□□□ -0.21
GABRE-205ENST00000465405 DCAF8L1A6NGE4 600 aa13.73□□□□□ -0.21
GABRE-205ENST00000465405 CROCC2H7BZ55 1655 aa13.72□□□□□ -0.21
GABRE-205ENST00000465405 TCOF1Q13428 1488 aaKnown RBP13.72□□□□□ -0.21
GABRE-205ENST00000465405 MYO3AQ8NEV4 1616 aa13.72□□□□□ -0.21
GABRE-205ENST00000465405 KDM5DQ9BY66 1539 aa13.71□□□□□ -0.21
GABRE-205ENST00000465405 DNMT1P26358 1616 aaKnown RBP13.7□□□□□ -0.22
GABRE-205ENST00000465405 DAPK1P53355 1430 aa13.7□□□□□ -0.22
GABRE-205ENST00000465405 WASHC2CQ9Y4E1 1318 aa13.69□□□□□ -0.22
GABRE-205ENST00000465405 RNF17Q9BXT8 1623 aaKnown RBP13.69□□□□□ -0.22
GABRE-205ENST00000465405 EIF2AK4Q9P2K8 1649 aaKnown RBP13.69□□□□□ -0.22
GABRE-205ENST00000465405 FBXO31Q5XUX0 539 aaPredicted RBP13.69□□□□□ -0.22
GABRE-205ENST00000465405 CAMSAP1Q5T5Y3 1602 aa13.68□□□□□ -0.22
GABRE-205ENST00000465405 SHANK2Q9UPX8 1470 aa13.68□□□□□ -0.22
GABRE-205ENST00000465405 RRP7BPQ9NSQ0 103 aa13.68□□□□□ -0.22
GABRE-205ENST00000465405 ZNF142P52746 1687 aaPredicted RBP13.68□□□□□ -0.22
GABRE-205ENST00000465405 DUOX2Q9NRD8 1548 aa13.68□□□□□ -0.22
GABRE-205ENST00000465405 FAM135AQ9P2D6 1515 aa13.68□□□□□ -0.22
GABRE-205ENST00000465405 MROH1Q8NDA8 1641 aa13.68□□□□□ -0.22
GABRE-205ENST00000465405 CEP170BQ9Y4F5 1589 aaPredicted RBP13.67□□□□□ -0.22
GABRE-205ENST00000465405 NCOA1Q15788 1441 aa13.67□□□□□ -0.22
GABRE-205ENST00000465405 CHIC2Q9UKJ5 165 aa13.67□□□□□ -0.22
GABRE-205ENST00000465405 KIF15Q9NS87 1388 aa13.67□□□□□ -0.22
GABRE-205ENST00000465405 PZPP20742 1482 aa13.67□□□□□ -0.22
GABRE-205ENST00000465405 ABCC3O15438 1527 aa13.65□□□□□ -0.22
GABRE-205ENST00000465405 FAM50AQ14320 339 aaKnown RBP13.65□□□□□ -0.22
GABRE-205ENST00000465405 FBXO41Q8TF61 875 aa13.65□□□□□ -0.22
GABRE-205ENST00000465405 NCKAP5LQ9HCH0 1330 aa13.64□□□□□ -0.23
GABRE-205ENST00000465405 PTPRTO14522 1441 aa13.64□□□□□ -0.23
GABRE-205ENST00000465405 CEP152O94986 1710 aa13.64□□□□□ -0.23
GABRE-205ENST00000465405 ZC3H13Q5T200 1668 aaKnown RBP13.64□□□□□ -0.23
GABRE-205ENST00000465405 TNRQ92752 1358 aa13.64□□□□□ -0.23
GABRE-205ENST00000465405 PPARGC1BQ86YN6 1023 aaKnown RBP13.64□□□□□ -0.23
GABRE-205ENST00000465405 A2ML1A8K2U0 1454 aa13.63□□□□□ -0.23
GABRE-205ENST00000465405 CERKQ8TCT0 537 aa13.63□□□□□ -0.23
GABRE-205ENST00000465405 ERBINQ96RT1 1412 aa13.63□□□□□ -0.23
GABRE-205ENST00000465405 ANKRD30AQ9BXX3 1397 aa13.61□□□□□ -0.23
GABRE-205ENST00000465405 POTEHQ6S545 545 aa13.61□□□□□ -0.23
GABRE-205ENST00000465405 PLA2R1Q13018 1463 aa13.61□□□□□ -0.23
GABRE-205ENST00000465405 PRDM15P57071 1507 aaPredicted RBP13.6□□□□□ -0.23
GABRE-205ENST00000465405 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.6□□□□□ -0.231e-15■■■□□ 18.6
GABRE-205ENST00000465405 DEPDC5O75140 1603 aa13.6□□□□□ -0.23
GABRE-205ENST00000465405 ADGRL2O95490 1459 aa13.6□□□□□ -0.23
GABRE-205ENST00000465405 SPATA31D1Q6ZQQ2 1576 aa13.58□□□□□ -0.23
GABRE-205ENST00000465405 ERVK-7P63135 1459 aa13.58□□□□□ -0.24
GABRE-205ENST00000465405 CFAP65Q6ZU64 1925 aaKnown RBP13.58□□□□□ -0.24
GABRE-205ENST00000465405 NLRP1Q9C000 1473 aa13.57□□□□□ -0.24
GABRE-205ENST00000465405 PKD2Q13563 968 aa13.57□□□□□ -0.24
GABRE-205ENST00000465405 LTBP4Q8N2S1 1624 aa13.57□□□□□ -0.24
GABRE-205ENST00000465405 UGGT1Q9NYU2 1555 aa13.56□□□□□ -0.24
GABRE-205ENST00000465405 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.56□□□□□ -0.24
GABRE-205ENST00000465405 C1QBPQ07021 282 aaKnown RBP13.55□□□□□ -0.24
GABRE-205ENST00000465405 POLR1AO95602 1720 aaPredicted RBP13.55□□□□□ -0.24
GABRE-205ENST00000465405 VWDEQ8N2E2 1590 aa13.54□□□□□ -0.24
GABRE-205ENST00000465405 NEURL4Q96JN8 1562 aa13.54□□□□□ -0.24
GABRE-205ENST00000465405 THEMISQ8N1K5 641 aaPredicted RBP13.54□□□□□ -0.24
GABRE-205ENST00000465405 ZNF335Q9H4Z2 1342 aaPredicted RBP13.54□□□□□ -0.24
GABRE-205ENST00000465405 KANK1Q14678 1352 aa13.54□□□□□ -0.24
GABRE-205ENST00000465405 ARHGAP31Q2M1Z3 1444 aa13.54□□□□□ -0.24
GABRE-205ENST00000465405 ANKRD50Q9ULJ7 1429 aa13.53□□□□□ -0.24
GABRE-205ENST00000465405 ITGAEP38570 1179 aa13.52□□□□□ -0.25
GABRE-205ENST00000465405 LMTK2Q8IWU2 1503 aa13.52□□□□□ -0.25
GABRE-205ENST00000465405 UBR1Q8IWV7 1749 aa13.51□□□□□ -0.25
GABRE-205ENST00000465405 ANKLE2Q86XL3 938 aa13.51□□□□□ -0.25
GABRE-205ENST00000465405 EFCAB6Q5THR3 1501 aa13.49□□□□□ -0.25
GABRE-205ENST00000465405 ROCK1Q13464 1354 aa13.48□□□□□ -0.25
GABRE-205ENST00000465405 PIK3C2BO00750 1634 aa13.48□□□□□ -0.25
GABRE-205ENST00000465405 SYNMO15061 1565 aa13.47□□□□□ -0.25
GABRE-205ENST00000465405 MED14O60244 1454 aa13.47□□□□□ -0.25
GABRE-205ENST00000465405 NPHP4O75161 1426 aaPredicted RBP13.47□□□□□ -0.25
GABRE-205ENST00000465405 UNC13BO14795 1591 aa13.46□□□□□ -0.25
GABRE-205ENST00000465405 IQGAP1P46940 1657 aa13.45□□□□□ -0.26
GABRE-205ENST00000465405 IQSEC2Q5JU85 1478 aa13.45□□□□□ -0.26
GABRE-205ENST00000465405 IDI1Q13907 227 aa13.45□□□□□ -0.26
GABRE-205ENST00000465405 NOS1P29475 1434 aa13.45□□□□□ -0.26
GABRE-205ENST00000465405 RRBP1Q9P2E9 1410 aaKnown RBP13.45□□□□□ -0.26
GABRE-205ENST00000465405 TET3O43151 1660 aa13.44□□□□□ -0.26
GABRE-205ENST00000465405 ARHGAP23Q9P227 1491 aa13.44□□□□□ -0.26
GABRE-205ENST00000465405 LTKP29376 864 aa13.44□□□□□ -0.26
GABRE-205ENST00000465405 SLIT1O75093 1534 aa13.44□□□□□ -0.26
GABRE-205ENST00000465405 SCAF11Q99590 1463 aaKnown RBP13.42□□□□□ -0.26
GABRE-205ENST00000465405 TXNDC2Q86VQ3 553 aa13.42□□□□□ -0.26
GABRE-205ENST00000465405 STAG3Q9UJ98 1225 aa13.42□□□□□ -0.26
GABRE-205ENST00000465405 GCC2Q8IWJ2 1684 aa13.42□□□□□ -0.26
GABRE-205ENST00000465405 RPRD2Q5VT52 1461 aaKnown RBP13.42□□□□□ -0.26
GABRE-205ENST00000465405 E9PCH4 1651 aa13.41□□□□□ -0.26
GABRE-205ENST00000465405 IQGAP3Q86VI3 1631 aa13.41□□□□□ -0.26
GABRE-205ENST00000465405 KDM5AP29375 1690 aaKnown RBP13.4□□□□□ -0.26
GABRE-205ENST00000465405 TMEM2Q9UHN6 1383 aa13.4□□□□□ -0.26
GABRE-205ENST00000465405 STRCP1A6NGW2 1772 aa13.4□□□□□ -0.26
GABRE-205ENST00000465405 ADGRB3O60242 1522 aa13.39□□□□□ -0.27
GABRE-205ENST00000465405 CPS1P31327 1500 aa13.39□□□□□ -0.27
GABRE-205ENST00000465405 NUP155O75694 1391 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms