RNA–Protein interactions for RNA: ENST00000465386.1

USP9X-205, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-205ENST00000465386 SEMA3EO15041 775 aa9.5□□□□□ -0.89
USP9X-205ENST00000465386 FOXK1P85037 733 aa9.5□□□□□ -0.89
USP9X-205ENST00000465386 DSG2Q14126 1118 aa9.5□□□□□ -0.89
USP9X-205ENST00000465386 CECR2Q9BXF3 1484 aa9.5□□□□□ -0.89
USP9X-205ENST00000465386 KIF3CO14782 793 aa9.49□□□□□ -0.89
USP9X-205ENST00000465386 TMC2Q8TDI7 906 aa9.49□□□□□ -0.89
USP9X-205ENST00000465386 PCDHGA4Q9Y5G9 962 aa9.49□□□□□ -0.89
USP9X-205ENST00000465386 SMARCA4P51532 1647 aa9.49□□□□□ -0.89
USP9X-205ENST00000465386 NCAPD3P42695 1498 aa9.48□□□□□ -0.89
USP9X-205ENST00000465386 PSDA5PKW4 1024 aaPredicted RBP9.48□□□□□ -0.89
USP9X-205ENST00000465386 TULP1O00294 542 aaPredicted RBP9.48□□□□□ -0.89
USP9X-205ENST00000465386 PSEN2P49810 448 aa9.48□□□□□ -0.89
USP9X-205ENST00000465386 SLC34A2O95436 690 aa9.47□□□□□ -0.89
USP9X-205ENST00000465386 STAC3Q96MF2 364 aa9.47□□□□□ -0.89
USP9X-205ENST00000465386 C2orf72A6NCS6 295 aa9.46□□□□□ -0.9
USP9X-205ENST00000465386 EMILIN3Q9NT22 766 aa9.46□□□□□ -0.9
USP9X-205ENST00000465386 RSF1Q96T23 1441 aaPredicted RBP9.46□□□□□ -0.9
USP9X-205ENST00000465386 ATAD2BQ9ULI0 1458 aa9.46□□□□□ -0.9
USP9X-205ENST00000465386 PEG3Q9GZU2 1588 aa9.46□□□□□ -0.9
USP9X-205ENST00000465386 TRAF7Q6Q0C0 670 aa9.45□□□□□ -0.9
USP9X-205ENST00000465386 LAPTM4AQ15012 233 aa9.44□□□□□ -0.9
USP9X-205ENST00000465386 MROH2BQ7Z745 1585 aa9.44□□□□□ -0.9
USP9X-205ENST00000465386 CC2D2AQ9P2K1 1620 aa9.44□□□□□ -0.9
USP9X-205ENST00000465386 HMGXB3Q12766 1538 aa9.43□□□□□ -0.9
USP9X-205ENST00000465386 BAZ1BQ9UIG0 1483 aaKnown RBP9.43□□□□□ -0.9
USP9X-205ENST00000465386 PLPP6Q8IY26 295 aa9.43□□□□□ -0.9
USP9X-205ENST00000465386 DPYSL4O14531 572 aa9.41□□□□□ -0.9
USP9X-205ENST00000465386 PDIA6Q15084 440 aa9.41□□□□□ -0.9
USP9X-205ENST00000465386 SMYD5Q6GMV2 418 aa9.41□□□□□ -0.9
USP9X-205ENST00000465386 THSD4Q6ZMP0 1018 aa9.41□□□□□ -0.9
USP9X-205ENST00000465386 SPDYE16A6NNV3 312 aaPredicted RBP9.4□□□□□ -0.9
USP9X-205ENST00000465386 KDM4FA0A1W2PPD8 638 aa9.38□□□□□ -0.91
USP9X-205ENST00000465386 ZC3H15Q8WU90 426 aaKnown RBP9.38□□□□□ -0.91
USP9X-205ENST00000465386 MLLT3P42568 568 aaPredicted RBP9.37□□□□□ -0.91
USP9X-205ENST00000465386 SUPT5HO00267 1087 aaKnown RBP9.35□□□□□ -0.91
USP9X-205ENST00000465386 VPS9D1Q9Y2B5 631 aa9.35□□□□□ -0.91
USP9X-205ENST00000465386 OXER1Q8TDS5 423 aa9.34□□□□□ -0.91
USP9X-205ENST00000465386 TOP2AP11388 1531 aaKnown RBP9.34□□□□□ -0.91
USP9X-205ENST00000465386 ITGBL1O95965 494 aaPredicted RBP9.33□□□□□ -0.92
USP9X-205ENST00000465386 ZNF775Q96BV0 537 aaPredicted RBP9.31□□□□□ -0.92
USP9X-205ENST00000465386 ZMYND10O75800 440 aa9.3□□□□□ -0.92
USP9X-205ENST00000465386 MAP3K9P80192 1104 aa9.3□□□□□ -0.92
USP9X-205ENST00000465386 RBM26Q5T8P6 1007 aaKnown RBP9.3□□□□□ -0.92
USP9X-205ENST00000465386 GFRA3O60609 400 aa9.29□□□□□ -0.92
USP9X-205ENST00000465386 PPP4R3BQ5MIZ7 849 aa9.29□□□□□ -0.92
USP9X-205ENST00000465386 BHMG1C9JSJ3 638 aaPredicted RBP9.28□□□□□ -0.92
USP9X-205ENST00000465386 ZNF787Q6DD87 383 aa9.28□□□□□ -0.92
USP9X-205ENST00000465386 PTCD2Q8WV60 388 aaKnown RBP9.28□□□□□ -0.92
USP9X-205ENST00000465386 UPF1Q92900 1129 aaKnown RBP eCLIP9.28□□□□□ -0.92
USP9X-205ENST00000465386 WIZO95785 1651 aa9.27□□□□□ -0.93
USP9X-205ENST00000465386 BARGINQ6ZT62 677 aa9.26□□□□□ -0.93
USP9X-205ENST00000465386 GPIHBP1Q8IV16 184 aa9.26□□□□□ -0.93
USP9X-205ENST00000465386 WNT2BQ93097 391 aa9.26□□□□□ -0.93
USP9X-205ENST00000465386 KCNK17Q96T54 332 aa9.26□□□□□ -0.93
USP9X-205ENST00000465386 SLC4A5Q9BY07 1137 aa9.26□□□□□ -0.93
USP9X-205ENST00000465386 TBC1D12O60347 775 aa9.24□□□□□ -0.93
USP9X-205ENST00000465386 KCNH8Q96L42 1107 aa9.24□□□□□ -0.93
USP9X-205ENST00000465386 SLC24A3Q9HC58 644 aa9.24□□□□□ -0.93
USP9X-205ENST00000465386 CADPSQ9ULU8 1353 aa9.23□□□□□ -0.93
USP9X-205ENST00000465386 GPR37O15354 613 aa9.22□□□□□ -0.93
USP9X-205ENST00000465386 EVI5O60447 810 aa9.22□□□□□ -0.93
USP9X-205ENST00000465386 PDS5BQ9NTI5 1447 aa9.22□□□□□ -0.93
USP9X-205ENST00000465386 GRXCR2A6NFK2 248 aa9.21□□□□□ -0.94
USP9X-205ENST00000465386 GOLGA8CPA6NN73 597 aa9.21□□□□□ -0.94
USP9X-205ENST00000465386 OSBPP22059 807 aa9.21□□□□□ -0.94
USP9X-205ENST00000465386 LOC100996750A0A140TA64 210 aa9.2□□□□□ -0.94
USP9X-205ENST00000465386 NRG2O14511 850 aaPredicted RBP9.2□□□□□ -0.94
USP9X-205ENST00000465386 KRTAP4-6Q9BYQ5 205 aa9.2□□□□□ -0.94
USP9X-205ENST00000465386 ANO8Q9HCE9 1232 aaPredicted RBP9.2□□□□□ -0.94
USP9X-205ENST00000465386 BRPF1P55201 1214 aaPredicted RBP9.19□□□□□ -0.94
USP9X-205ENST00000465386 CCDC88BA6NC98 1476 aa9.19□□□□□ -0.94
USP9X-205ENST00000465386 LAMC3Q9Y6N6 1575 aa9.18□□□□□ -0.94
USP9X-205ENST00000465386 CFTRP13569 1480 aa9.17□□□□□ -0.94
USP9X-205ENST00000465386 MRPL50Q8N5N7 158 aaKnown RBP9.17□□□□□ -0.94
USP9X-205ENST00000465386 DDX12PQ92771 950 aa9.17□□□□□ -0.94
USP9X-205ENST00000465386 PRIM1P49642 420 aaKnown RBP9.16□□□□□ -0.94
USP9X-205ENST00000465386 TMEM132AQ24JP5 1023 aa9.16□□□□□ -0.94
USP9X-205ENST00000465386 AK7Q96M32 723 aa9.15□□□□□ -0.94
USP9X-205ENST00000465386 NUTM2FA1L443 756 aa9.13□□□□□ -0.95
USP9X-205ENST00000465386 ERCC6Q03468 1493 aa9.13□□□□□ -0.95
USP9X-205ENST00000465386 PHF14O94880 888 aa9.12□□□□□ -0.95
USP9X-205ENST00000465386 NEUROD2Q15784 382 aa9.12□□□□□ -0.95
USP9X-205ENST00000465386 KRI1Q8N9T8 703 aaKnown RBP9.12□□□□□ -0.95
USP9X-205ENST00000465386 FCHSD2O94868 740 aa9.11□□□□□ -0.95
USP9X-205ENST00000465386 KCNC4Q03721 635 aa9.11□□□□□ -0.95
USP9X-205ENST00000465386 EPAS1Q99814 870 aa9.11□□□□□ -0.95
USP9X-205ENST00000465386 ZBED2Q9BTP6 218 aa9.11□□□□□ -0.95
USP9X-205ENST00000465386 HIC1Q14526 733 aa9.1□□□□□ -0.95
USP9X-205ENST00000465386 MINK1Q8N4C8 1332 aaPredicted RBP9.09□□□□□ -0.95
USP9X-205ENST00000465386 GNPATO15228 680 aa9.09□□□□□ -0.95
USP9X-205ENST00000465386 EN1Q05925 392 aaPredicted RBP9.09□□□□□ -0.95
USP9X-205ENST00000465386 MAP2K5Q13163 448 aa9.09□□□□□ -0.95
USP9X-205ENST00000465386 PTGDRQ13258 359 aa9.09□□□□□ -0.95
USP9X-205ENST00000465386 BCL2L12Q9HB09 334 aa9.09□□□□□ -0.95
USP9X-205ENST00000465386 ABCC8Q09428 1581 aa9.08□□□□□ -0.96
USP9X-205ENST00000465386 TRIM66O15016 1216 aa9.08□□□□□ -0.96
USP9X-205ENST00000465386 PCDHGA10Q9Y5H3 936 aa9.08□□□□□ -0.96
USP9X-205ENST00000465386 FANCD2Q9BXW9 1451 aa9.08□□□□□ -0.96
USP9X-205ENST00000465386 CEP164Q9UPV0 1460 aa9.08□□□□□ -0.96
USP9X-205ENST00000465386 JPH4Q96JJ6 628 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms