RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 GPATCH8Q9UKJ3 1502 aaKnown RBP16.64■□□□□ 0.25
CLCNKA-204ENST00000464764 PER1O15534 1290 aaPredicted RBP16.64■□□□□ 0.25
CLCNKA-204ENST00000464764 DISP1Q96F81 1524 aa16.63■□□□□ 0.25
CLCNKA-204ENST00000464764 KTN1Q86UP2 1357 aaKnown RBP16.63■□□□□ 0.25
CLCNKA-204ENST00000464764 USP35Q9P2H5 1018 aa16.63■□□□□ 0.25
CLCNKA-204ENST00000464764 PDE3BQ13370 1112 aa16.62■□□□□ 0.25
CLCNKA-204ENST00000464764 PPM1GO15355 546 aaPredicted RBP16.62■□□□□ 0.25
CLCNKA-204ENST00000464764 KIAA0586Q9BVV6 1533 aa16.62■□□□□ 0.25
CLCNKA-204ENST00000464764 PARD3Q8TEW0 1356 aa16.61■□□□□ 0.25
CLCNKA-204ENST00000464764 WASHC2CQ9Y4E1 1318 aa16.6■□□□□ 0.25
CLCNKA-204ENST00000464764 TROQ12816 1431 aaPredicted RBP16.6■□□□□ 0.25
CLCNKA-204ENST00000464764 NFKBIBQ15653 356 aa16.6■□□□□ 0.25
CLCNKA-204ENST00000464764 PLB1Q6P1J6 1458 aa16.59■□□□□ 0.25
CLCNKA-204ENST00000464764 PANK3Q9H999 370 aa16.59■□□□□ 0.25
CLCNKA-204ENST00000464764 ADAMTS12P58397 1594 aa16.59■□□□□ 0.25
CLCNKA-204ENST00000464764 HNRNPMP52272 730 aaKnown RBP eCLIP16.59■□□□□ 0.25
CLCNKA-204ENST00000464764 PBRM1Q86U86 1689 aa16.57■□□□□ 0.24
CLCNKA-204ENST00000464764 ZNF608Q9ULD9 1512 aaPredicted RBP16.57■□□□□ 0.24
CLCNKA-204ENST00000464764 ADAMTS8Q9UP79 889 aa16.56■□□□□ 0.24
CLCNKA-204ENST00000464764 GSE1Q14687 1217 aa16.56■□□□□ 0.24
CLCNKA-204ENST00000464764 KIAA0556O60303 1618 aa16.55■□□□□ 0.24
CLCNKA-204ENST00000464764 TSPY4P0CV99 314 aa16.55■□□□□ 0.24
CLCNKA-204ENST00000464764 TSPY10P0CW01 314 aa16.55■□□□□ 0.24
CLCNKA-204ENST00000464764 FRAT1Q92837 279 aaPredicted RBP16.55■□□□□ 0.24
CLCNKA-204ENST00000464764 RAPGEF6Q8TEU7 1601 aa16.55■□□□□ 0.24
CLCNKA-204ENST00000464764 ADGRL2O95490 1459 aa16.55■□□□□ 0.24
CLCNKA-204ENST00000464764 DISP3Q9P2K9 1392 aa16.54■□□□□ 0.24
CLCNKA-204ENST00000464764 DDRGK1Q96HY6 314 aa16.54■□□□□ 0.24
CLCNKA-204ENST00000464764 FBLN2P98095 1184 aa16.54■□□□□ 0.24
CLCNKA-204ENST00000464764 RGS3P49796 1198 aa16.53■□□□□ 0.24
CLCNKA-204ENST00000464764 C9orf84Q5VXU9 1444 aa16.52■□□□□ 0.24
CLCNKA-204ENST00000464764 EIF5BO60841 1220 aaKnown RBP16.52■□□□□ 0.24
CLCNKA-204ENST00000464764 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.52■□□□□ 0.24
CLCNKA-204ENST00000464764 TESK2Q96S53 571 aa16.51■□□□□ 0.23
CLCNKA-204ENST00000464764 DAXXQ9UER7 740 aaPredicted RBP16.51■□□□□ 0.23
CLCNKA-204ENST00000464764 KDM2BQ8NHM5 1336 aa16.51■□□□□ 0.23
CLCNKA-204ENST00000464764 C8orf34Q49A92 452 aa16.5■□□□□ 0.23
CLCNKA-204ENST00000464764 PLEKHD1A6NEE1 506 aa16.49■□□□□ 0.23
CLCNKA-204ENST00000464764 FRAT2O75474 233 aaPredicted RBP16.49■□□□□ 0.23
CLCNKA-204ENST00000464764 ADGBQ8N7X0 1667 aa16.49■□□□□ 0.23
CLCNKA-204ENST00000464764 ARHGEF12Q9NZN5 1544 aa16.49■□□□□ 0.23
CLCNKA-204ENST00000464764 PLEKHH1Q9ULM0 1364 aa16.48■□□□□ 0.23
CLCNKA-204ENST00000464764 E9PCH4 1651 aa16.48■□□□□ 0.23
CLCNKA-204ENST00000464764 DUSP27Q5VZP5 1158 aa16.47■□□□□ 0.23
CLCNKA-204ENST00000464764 PRAG1Q86YV5 1406 aa16.47■□□□□ 0.23
CLCNKA-204ENST00000464764 BLMP54132 1417 aaPredicted RBP16.46■□□□□ 0.23
CLCNKA-204ENST00000464764 FAM161AQ3B820 660 aa16.46■□□□□ 0.23
CLCNKA-204ENST00000464764 CENPQQ7L2Z9 268 aaPredicted RBP16.45■□□□□ 0.22
CLCNKA-204ENST00000464764 CHMP7Q8WUX9 453 aaPredicted RBP16.45■□□□□ 0.22
CLCNKA-204ENST00000464764 CCDC146Q8IYE0 955 aa16.44■□□□□ 0.22
CLCNKA-204ENST00000464764 CEP170Q5SW79 1584 aa16.44■□□□□ 0.22
CLCNKA-204ENST00000464764 CROCC2H7BZ55 1655 aa16.43■□□□□ 0.22
CLCNKA-204ENST00000464764 SPINK5Q9NQ38 1064 aaPredicted RBP16.43■□□□□ 0.22
CLCNKA-204ENST00000464764 CCDC144AA2RUR9 1427 aa16.43■□□□□ 0.22
CLCNKA-204ENST00000464764 ITSN2Q9NZM3 1697 aa16.42■□□□□ 0.22
CLCNKA-204ENST00000464764 JPH4Q96JJ6 628 aa16.42■□□□□ 0.22
CLCNKA-204ENST00000464764 KDM5DQ9BY66 1539 aa16.42■□□□□ 0.22
CLCNKA-204ENST00000464764 PPP2R1AP30153 589 aa16.42■□□□□ 0.22
CLCNKA-204ENST00000464764 TMF1P82094 1093 aa16.42■□□□□ 0.22
CLCNKA-204ENST00000464764 WDR43Q15061 677 aaKnown RBP eCLIP16.42■□□□□ 0.22
CLCNKA-204ENST00000464764 GRIN2AQ12879 1464 aa16.42■□□□□ 0.22
CLCNKA-204ENST00000464764 BCAR3O75815 825 aa16.41■□□□□ 0.22
CLCNKA-204ENST00000464764 ERBINQ96RT1 1412 aa16.41■□□□□ 0.22
CLCNKA-204ENST00000464764 GOLGA2Q08379 1002 aa16.4■□□□□ 0.22
CLCNKA-204ENST00000464764 PTPRGP23470 1445 aa16.4■□□□□ 0.22
CLCNKA-204ENST00000464764 COL17A1Q9UMD9 1497 aaPredicted RBP16.4■□□□□ 0.22
CLCNKA-204ENST00000464764 PLA2R1Q13018 1463 aa16.39■□□□□ 0.21
CLCNKA-204ENST00000464764 ZMYM4Q5VZL5 1548 aa16.39■□□□□ 0.21
CLCNKA-204ENST00000464764 A2MP01023 1474 aa16.38■□□□□ 0.21
CLCNKA-204ENST00000464764 KNSTRNQ9Y448 316 aa16.38■□□□□ 0.21
CLCNKA-204ENST00000464764 CDC42BPAQ5VT25 1732 aa16.38■□□□□ 0.21
CLCNKA-204ENST00000464764 FAM135AQ9P2D6 1515 aa16.38■□□□□ 0.21
CLCNKA-204ENST00000464764 IGHDP01880 384 aa16.37■□□□□ 0.21
CLCNKA-204ENST00000464764 TRPM1Q7Z4N2 1603 aa16.37■□□□□ 0.21
CLCNKA-204ENST00000464764 SEC24BO95487 1268 aa16.37■□□□□ 0.21
CLCNKA-204ENST00000464764 ABCC10Q5T3U5 1492 aa16.37■□□□□ 0.21
CLCNKA-204ENST00000464764 GPRASP1Q5JY77 1395 aa16.36■□□□□ 0.21
CLCNKA-204ENST00000464764 ZNF521Q96K83 1311 aa16.36■□□□□ 0.21
CLCNKA-204ENST00000464764 MRC2Q9UBG0 1479 aa16.36■□□□□ 0.21
CLCNKA-204ENST00000464764 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
CLCNKA-204ENST00000464764 MAGI1Q96QZ7 1491 aaPredicted RBP16.36■□□□□ 0.21
CLCNKA-204ENST00000464764 SLFN5Q08AF3 891 aa16.36■□□□□ 0.21
CLCNKA-204ENST00000464764 ATP10BO94823 1461 aa16.35■□□□□ 0.21
CLCNKA-204ENST00000464764 MAGI2Q86UL8 1455 aa16.35■□□□□ 0.21
CLCNKA-204ENST00000464764 APAF1O14727 1248 aa16.35■□□□□ 0.21
CLCNKA-204ENST00000464764 ARXQ96QS3 562 aa16.35■□□□□ 0.21
CLCNKA-204ENST00000464764 AMER1Q5JTC6 1135 aaPredicted RBP16.34■□□□□ 0.21
CLCNKA-204ENST00000464764 SHANK2Q9UPX8 1470 aa16.34■□□□□ 0.21
CLCNKA-204ENST00000464764 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.33■□□□□ 0.21
CLCNKA-204ENST00000464764 POGKQ9P215 609 aa16.33■□□□□ 0.2
CLCNKA-204ENST00000464764 ADCY10Q96PN6 1610 aa16.33■□□□□ 0.2
CLCNKA-204ENST00000464764 SLKQ9H2G2 1235 aaPredicted RBP16.32■□□□□ 0.2
CLCNKA-204ENST00000464764 USP19O94966 1318 aa16.32■□□□□ 0.2
CLCNKA-204ENST00000464764 IFT140Q96RY7 1462 aa16.32■□□□□ 0.2
CLCNKA-204ENST00000464764 INSRP06213 1382 aa16.31■□□□□ 0.2
CLCNKA-204ENST00000464764 PLEKHH2Q8IVE3 1493 aa16.31■□□□□ 0.2
CLCNKA-204ENST00000464764 CARMIL2Q6F5E8 1435 aa16.3■□□□□ 0.2
CLCNKA-204ENST00000464764 PANK1Q8TE04 598 aa16.3■□□□□ 0.2
CLCNKA-204ENST00000464764 PRDM15P57071 1507 aaPredicted RBP16.29■□□□□ 0.2
CLCNKA-204ENST00000464764 EIF4G3O43432 1585 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms