RNA–Protein interactions for RNA: ENST00000464117.1

SHISA4-202, Transcript of shisa family member 4, humanhuman

TSL 2

Gene SHISA4, Length 914 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-202ENST00000464117 MYO3AQ8NEV4 1616 aa31.25■■■□□ 2.59
SHISA4-202ENST00000464117 ZNF142P52746 1687 aaPredicted RBP31.24■■■□□ 2.59
SHISA4-202ENST00000464117 CAMSAP1Q5T5Y3 1602 aa31.23■■■□□ 2.59
SHISA4-202ENST00000464117 WASHC2CQ9Y4E1 1318 aa31.22■■■□□ 2.59
SHISA4-202ENST00000464117 CEP170BQ9Y4F5 1589 aaPredicted RBP31.21■■■□□ 2.59
SHISA4-202ENST00000464117 PZPP20742 1482 aa31.18■■■□□ 2.58
SHISA4-202ENST00000464117 RNF17Q9BXT8 1623 aaKnown RBP31.16■■■□□ 2.58
SHISA4-202ENST00000464117 PTPN23Q9H3S7 1636 aa31.16■■■□□ 2.58
SHISA4-202ENST00000464117 PLA2R1Q13018 1463 aa31.16■■■□□ 2.58
SHISA4-202ENST00000464117 EIF2AK4Q9P2K8 1649 aaKnown RBP31.16■■■□□ 2.58
SHISA4-202ENST00000464117 SHANK2Q9UPX8 1470 aa31.14■■■□□ 2.58
SHISA4-202ENST00000464117 A2ML1A8K2U0 1454 aa31.14■■■□□ 2.57
SHISA4-202ENST00000464117 TNRQ92752 1358 aa31.13■■■□□ 2.57
SHISA4-202ENST00000464117 FGD6Q6ZV73 1430 aa31.13■■■□□ 2.57
SHISA4-202ENST00000464117 PKD2Q13563 968 aa31.12■■■□□ 2.57
SHISA4-202ENST00000464117 DUOX2Q9NRD8 1548 aa31.12■■■□□ 2.57
SHISA4-202ENST00000464117 ABCC5O15440 1437 aa31.11■■■□□ 2.57
SHISA4-202ENST00000464117 FBXO31Q5XUX0 539 aaPredicted RBP31.11■■■□□ 2.57
SHISA4-202ENST00000464117 TCOF1Q13428 1488 aaKnown RBP31.1■■■□□ 2.57
SHISA4-202ENST00000464117 CROCC2H7BZ55 1655 aa31.09■■■□□ 2.57
SHISA4-202ENST00000464117 NCKAP5LQ9HCH0 1330 aa31.08■■■□□ 2.57
SHISA4-202ENST00000464117 ZC3H13Q5T200 1668 aaKnown RBP31.08■■■□□ 2.57
SHISA4-202ENST00000464117 DNMT1P26358 1616 aaKnown RBP31.07■■■□□ 2.56
SHISA4-202ENST00000464117 DAPK1P53355 1430 aa31.07■■■□□ 2.56
SHISA4-202ENST00000464117 KIF15Q9NS87 1388 aa31.06■■■□□ 2.56
SHISA4-202ENST00000464117 ABCC3O15438 1527 aa31.06■■■□□ 2.56
SHISA4-202ENST00000464117 MROH1Q8NDA8 1641 aa31.03■■■□□ 2.56
SHISA4-202ENST00000464117 ERBINQ96RT1 1412 aa31.03■■■□□ 2.56
SHISA4-202ENST00000464117 LTBP4Q8N2S1 1624 aa31.02■■■□□ 2.56
SHISA4-202ENST00000464117 NLRP1Q9C000 1473 aa31.01■■■□□ 2.56
SHISA4-202ENST00000464117 RRP7BPQ9NSQ0 103 aa31■■■□□ 2.55
SHISA4-202ENST00000464117 SPATA31D1Q6ZQQ2 1576 aa30.96■■■□□ 2.55
SHISA4-202ENST00000464117 IQSEC2Q5JU85 1478 aa30.95■■■□□ 2.55
SHISA4-202ENST00000464117 ANKRD30AQ9BXX3 1397 aa30.95■■■□□ 2.55
SHISA4-202ENST00000464117 PRDM15P57071 1507 aaPredicted RBP30.95■■■□□ 2.55
SHISA4-202ENST00000464117 THEMISQ8N1K5 641 aaPredicted RBP30.94■■■□□ 2.54
SHISA4-202ENST00000464117 CEP152O94986 1710 aa30.93■■■□□ 2.54
SHISA4-202ENST00000464117 UGGT1Q9NYU2 1555 aa30.92■■■□□ 2.54
SHISA4-202ENST00000464117 ERVK-7P63135 1459 aa30.92■■■□□ 2.54
SHISA4-202ENST00000464117 POLR1AO95602 1720 aaPredicted RBP30.9■■■□□ 2.54
SHISA4-202ENST00000464117 CHIC2Q9UKJ5 165 aa30.9■■■□□ 2.54
SHISA4-202ENST00000464117 ZNF335Q9H4Z2 1342 aaPredicted RBP30.9■■■□□ 2.54
SHISA4-202ENST00000464117 ARHGAP31Q2M1Z3 1444 aa30.89■■■□□ 2.53
SHISA4-202ENST00000464117 DEPDC5O75140 1603 aa30.88■■■□□ 2.53
SHISA4-202ENST00000464117 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.88■■■□□ 2.53
SHISA4-202ENST00000464117 ANKLE2Q86XL3 938 aa30.87■■■□□ 2.53
SHISA4-202ENST00000464117 FAM50AQ14320 339 aaKnown RBP30.86■■■□□ 2.53
SHISA4-202ENST00000464117 KANK1Q14678 1352 aa30.86■■■□□ 2.53
SHISA4-202ENST00000464117 ADGRL2O95490 1459 aa30.86■■■□□ 2.53
SHISA4-202ENST00000464117 NEURL4Q96JN8 1562 aa30.86■■■□□ 2.53
SHISA4-202ENST00000464117 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.83■■■□□ 2.53
SHISA4-202ENST00000464117 CFAP65Q6ZU64 1925 aaKnown RBP30.81■■■□□ 2.52
SHISA4-202ENST00000464117 MED14O60244 1454 aa30.79■■■□□ 2.52
SHISA4-202ENST00000464117 LMTK2Q8IWU2 1503 aa30.78■■■□□ 2.52
SHISA4-202ENST00000464117 VWDEQ8N2E2 1590 aa30.77■■■□□ 2.52
SHISA4-202ENST00000464117 NPHP4O75161 1426 aaPredicted RBP30.75■■■□□ 2.51
SHISA4-202ENST00000464117 UBR1Q8IWV7 1749 aa30.73■■■□□ 2.51
SHISA4-202ENST00000464117 ANKRD50Q9ULJ7 1429 aa30.72■■■□□ 2.51
SHISA4-202ENST00000464117 CPS1P31327 1500 aa30.7■■■□□ 2.51
SHISA4-202ENST00000464117 IQGAP1P46940 1657 aa30.68■■■□□ 2.5
SHISA4-202ENST00000464117 EFCAB6Q5THR3 1501 aa30.66■■■□□ 2.5
SHISA4-202ENST00000464117 SLIT1O75093 1534 aa30.65■■■□□ 2.5
SHISA4-202ENST00000464117 UBAP1LF5GYI3 381 aa30.65■■■□□ 2.5
SHISA4-202ENST00000464117 ARHGAP23Q9P227 1491 aa30.64■■■□□ 2.5
SHISA4-202ENST00000464117 SCAF11Q99590 1463 aaKnown RBP30.63■■■□□ 2.49
SHISA4-202ENST00000464117 ROCK1Q13464 1354 aa30.63■■■□□ 2.49
SHISA4-202ENST00000464117 PIK3C2BO00750 1634 aa30.62■■■□□ 2.49
SHISA4-202ENST00000464117 NOS1P29475 1434 aa30.61■■■□□ 2.49
SHISA4-202ENST00000464117 KDM5AP29375 1690 aaKnown RBP30.59■■■□□ 2.49
SHISA4-202ENST00000464117 RPRD2Q5VT52 1461 aaKnown RBP30.59■■■□□ 2.49
SHISA4-202ENST00000464117 STAG3Q9UJ98 1225 aa30.59■■■□□ 2.49
SHISA4-202ENST00000464117 TXNDC2Q86VQ3 553 aa30.58■■■□□ 2.49
SHISA4-202ENST00000464117 EID1Q9Y6B2 187 aa30.58■■■□□ 2.49
SHISA4-202ENST00000464117 SYNMO15061 1565 aa30.58■■■□□ 2.49
SHISA4-202ENST00000464117 LTKP29376 864 aa30.57■■■□□ 2.48
SHISA4-202ENST00000464117 IDI1Q13907 227 aa30.57■■■□□ 2.48
SHISA4-202ENST00000464117 TMEM2Q9UHN6 1383 aa30.56■■■□□ 2.48
SHISA4-202ENST00000464117 SLC52A1Q9NWF4 448 aa30.55■■■□□ 2.48
SHISA4-202ENST00000464117 UNC13BO14795 1591 aa30.54■■■□□ 2.48
SHISA4-202ENST00000464117 PPARGC1BQ86YN6 1023 aaKnown RBP30.54■■■□□ 2.48
SHISA4-202ENST00000464117 TET3O43151 1660 aa30.53■■■□□ 2.48
SHISA4-202ENST00000464117 TOM1O60784 492 aa30.5■■■□□ 2.47
SHISA4-202ENST00000464117 ADGRB3O60242 1522 aa30.48■■■□□ 2.47
SHISA4-202ENST00000464117 GCC2Q8IWJ2 1684 aa30.48■■■□□ 2.47
SHISA4-202ENST00000464117 STRCP1A6NGW2 1772 aa30.47■■■□□ 2.47
SHISA4-202ENST00000464117 ITGAEP38570 1179 aa30.47■■■□□ 2.47
SHISA4-202ENST00000464117 LRRC7Q96NW7 1537 aa30.44■■■□□ 2.46
SHISA4-202ENST00000464117 IQGAP3Q86VI3 1631 aa30.43■■■□□ 2.46
SHISA4-202ENST00000464117 DISP3Q9P2K9 1392 aa30.4■■■□□ 2.46
SHISA4-202ENST00000464117 RRBP1Q9P2E9 1410 aaKnown RBP30.39■■■□□ 2.46
SHISA4-202ENST00000464117 SCAF1Q9H7N4 1312 aaKnown RBP30.39■■■□□ 2.46
SHISA4-202ENST00000464117 PIP4K2BP78356 416 aa30.38■■■□□ 2.45
SHISA4-202ENST00000464117 NUP155O75694 1391 aa30.38■■■□□ 2.45
SHISA4-202ENST00000464117 E9PCH4 1651 aa30.37■■■□□ 2.45
SHISA4-202ENST00000464117 ALKQ9UM73 1620 aa30.33■■■□□ 2.45
SHISA4-202ENST00000464117 ZFYVE9O95405 1425 aa30.32■■■□□ 2.44
SHISA4-202ENST00000464117 HDGFP51858 240 aaKnown RBP30.32■■■□□ 2.44
SHISA4-202ENST00000464117 TMEM131LA2VDJ0 1609 aa30.32■■■□□ 2.44
SHISA4-202ENST00000464117 HSPA1LP34931 641 aa30.3■■■□□ 2.44
SHISA4-202ENST00000464117 MYO5BQ9ULV0 1848 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms