RNA–Protein interactions for RNA: ENST00000464094.2

RTKN-205, Transcript of rhotekin, humanhuman

TSL 1 (best)

Gene RTKN, Length 1,266 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-205ENST00000464094 RNF17Q9BXT8 1623 aaKnown RBP34.66■■■■□ 3.14
RTKN-205ENST00000464094 KDM5DQ9BY66 1539 aa34.66■■■■□ 3.14
RTKN-205ENST00000464094 PTPRKQ15262 1439 aa34.65■■■■□ 3.14
RTKN-205ENST00000464094 MYO3AQ8NEV4 1616 aa34.63■■■■□ 3.13
RTKN-205ENST00000464094 DAPK1P53355 1430 aa34.63■■■■□ 3.13
RTKN-205ENST00000464094 DUOX2Q9NRD8 1548 aa34.6■■■■□ 3.13
RTKN-205ENST00000464094 ZNF142P52746 1687 aaPredicted RBP34.6■■■■□ 3.13
RTKN-205ENST00000464094 MROH1Q8NDA8 1641 aa34.55■■■■□ 3.12
RTKN-205ENST00000464094 ZC3H13Q5T200 1668 aaKnown RBP34.55■■■■□ 3.12
RTKN-205ENST00000464094 WASHC2CQ9Y4E1 1318 aa34.54■■■■□ 3.12
RTKN-205ENST00000464094 KIF15Q9NS87 1388 aa34.53■■■■□ 3.12
RTKN-205ENST00000464094 CEP170BQ9Y4F5 1589 aaPredicted RBP34.53■■■■□ 3.12
RTKN-205ENST00000464094 PZPP20742 1482 aa34.52■■■■□ 3.12
RTKN-205ENST00000464094 ILDR1Q86SU0 546 aaPredicted RBP34.51■■■■□ 3.12
RTKN-205ENST00000464094 ABCC3O15438 1527 aa34.5■■■■□ 3.11
RTKN-205ENST00000464094 CAMSAP1Q5T5Y3 1602 aa34.49■■■■□ 3.11
RTKN-205ENST00000464094 ERBINQ96RT1 1412 aa34.48■■■■□ 3.11
RTKN-205ENST00000464094 NCOA1Q15788 1441 aa34.47■■■■□ 3.11
RTKN-205ENST00000464094 CEP152O94986 1710 aa34.47■■■■□ 3.11
RTKN-205ENST00000464094 RRP7BPQ9NSQ0 103 aa34.47■■■■□ 3.11
RTKN-205ENST00000464094 FBXO31Q5XUX0 539 aaPredicted RBP34.43■■■■□ 3.1
RTKN-205ENST00000464094 DMRT2Q9Y5R5 561 aa34.43■■■■□ 3.1
RTKN-205ENST00000464094 PRDM15P57071 1507 aaPredicted RBP34.43■■■■□ 3.1
RTKN-205ENST00000464094 DEPDC5O75140 1603 aa34.43■■■■□ 3.1
RTKN-205ENST00000464094 ANKRD30AQ9BXX3 1397 aa34.42■■■■□ 3.1
RTKN-205ENST00000464094 FAM50AQ14320 339 aaKnown RBP34.42■■■■□ 3.1
RTKN-205ENST00000464094 CHIC2Q9UKJ5 165 aa34.41■■■■□ 3.1
RTKN-205ENST00000464094 A2ML1A8K2U0 1454 aa34.4■■■■□ 3.1
RTKN-205ENST00000464094 ADGRL2O95490 1459 aa34.4■■■■□ 3.1
RTKN-205ENST00000464094 TNRQ92752 1358 aa34.4■■■■□ 3.1
RTKN-205ENST00000464094 PTPRTO14522 1441 aa34.39■■■■□ 3.1
RTKN-205ENST00000464094 PLA2R1Q13018 1463 aa34.37■■■■□ 3.09
RTKN-205ENST00000464094 SPATA31D1Q6ZQQ2 1576 aa34.34■■■■□ 3.09
RTKN-205ENST00000464094 CFAP65Q6ZU64 1925 aaKnown RBP34.3■■■■□ 3.08
RTKN-205ENST00000464094 NLRP1Q9C000 1473 aa34.29■■■■□ 3.08
RTKN-205ENST00000464094 PPARGC1BQ86YN6 1023 aaKnown RBP34.29■■■■□ 3.08
RTKN-205ENST00000464094 ERVK-7P63135 1459 aa34.28■■■■□ 3.08
RTKN-205ENST00000464094 FBXO41Q8TF61 875 aa34.28■■■■□ 3.08
RTKN-205ENST00000464094 NCKAP5LQ9HCH0 1330 aa34.28■■■■□ 3.08
RTKN-205ENST00000464094 POLR1AO95602 1720 aaPredicted RBP34.26■■■■□ 3.07
RTKN-205ENST00000464094 VWDEQ8N2E2 1590 aa34.25■■■■□ 3.07
RTKN-205ENST00000464094 ARHGAP31Q2M1Z3 1444 aa34.23■■■■□ 3.07
RTKN-205ENST00000464094 CERKQ8TCT0 537 aa34.23■■■■□ 3.07
RTKN-205ENST00000464094 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.23■■■■□ 3.071e-10■■□□□ 13.4
RTKN-205ENST00000464094 PKD2Q13563 968 aa34.22■■■■□ 3.07
RTKN-205ENST00000464094 UGGT1Q9NYU2 1555 aa34.22■■■■□ 3.07
RTKN-205ENST00000464094 KANK1Q14678 1352 aa34.21■■■■□ 3.07
RTKN-205ENST00000464094 LMTK2Q8IWU2 1503 aa34.2■■■■□ 3.07
RTKN-205ENST00000464094 ANKRD50Q9ULJ7 1429 aa34.19■■■■□ 3.06
RTKN-205ENST00000464094 LTBP4Q8N2S1 1624 aa34.17■■■■□ 3.06
RTKN-205ENST00000464094 NEURL4Q96JN8 1562 aa34.16■■■■□ 3.06
RTKN-205ENST00000464094 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.16■■■■□ 3.06
RTKN-205ENST00000464094 UBR1Q8IWV7 1749 aa34.13■■■■□ 3.05
RTKN-205ENST00000464094 ROCK1Q13464 1354 aa34.13■■■■□ 3.05
RTKN-205ENST00000464094 EFCAB6Q5THR3 1501 aa34.11■■■■□ 3.05
RTKN-205ENST00000464094 THEMISQ8N1K5 641 aaPredicted RBP34.11■■■■□ 3.05
RTKN-205ENST00000464094 UNC13BO14795 1591 aa34.1■■■■□ 3.05
RTKN-205ENST00000464094 RRBP1Q9P2E9 1410 aaKnown RBP34.04■■■■□ 3.04
RTKN-205ENST00000464094 PIK3C2BO00750 1634 aa34.04■■■■□ 3.04
RTKN-205ENST00000464094 TET3O43151 1660 aa34.03■■■■□ 3.04
RTKN-205ENST00000464094 ITGAEP38570 1179 aa34.03■■■■□ 3.04
RTKN-205ENST00000464094 ANKLE2Q86XL3 938 aa34.03■■■■□ 3.04
RTKN-205ENST00000464094 ZNF335Q9H4Z2 1342 aaPredicted RBP34.03■■■■□ 3.04
RTKN-205ENST00000464094 SYNMO15061 1565 aa34.02■■■■□ 3.04
RTKN-205ENST00000464094 GCC2Q8IWJ2 1684 aa34.01■■■■□ 3.04
RTKN-205ENST00000464094 MED14O60244 1454 aa34.01■■■■□ 3.03
RTKN-205ENST00000464094 IQGAP1P46940 1657 aa33.99■■■■□ 3.03
RTKN-205ENST00000464094 KDM5AP29375 1690 aaKnown RBP33.98■■■■□ 3.03
RTKN-205ENST00000464094 NOS1P29475 1434 aa33.97■■■■□ 3.03
RTKN-205ENST00000464094 IQSEC2Q5JU85 1478 aa33.97■■■■□ 3.03
RTKN-205ENST00000464094 RPRD2Q5VT52 1461 aaKnown RBP33.96■■■■□ 3.03
RTKN-205ENST00000464094 NPHP4O75161 1426 aaPredicted RBP33.96■■■■□ 3.03
RTKN-205ENST00000464094 IQGAP3Q86VI3 1631 aa33.95■■■■□ 3.03
RTKN-205ENST00000464094 SLIT1O75093 1534 aa33.94■■■■□ 3.02
RTKN-205ENST00000464094 ARHGAP23Q9P227 1491 aa33.93■■■■□ 3.02
RTKN-205ENST00000464094 E9PCH4 1651 aa33.9■■■■□ 3.02
RTKN-205ENST00000464094 SCAF11Q99590 1463 aaKnown RBP33.88■■■■□ 3.01
RTKN-205ENST00000464094 IDI1Q13907 227 aa33.88■■■■□ 3.01
RTKN-205ENST00000464094 ADGRB3O60242 1522 aa33.85■■■■□ 3.01
RTKN-205ENST00000464094 CPS1P31327 1500 aa33.83■■■■□ 3.01
RTKN-205ENST00000464094 TMEM2Q9UHN6 1383 aa33.82■■■■□ 3
RTKN-205ENST00000464094 LTKP29376 864 aa33.81■■■■□ 3
RTKN-205ENST00000464094 STAG3Q9UJ98 1225 aa33.81■■■■□ 3
RTKN-205ENST00000464094 NUP155O75694 1391 aa33.81■■■■□ 3
RTKN-205ENST00000464094 MYO5BQ9ULV0 1848 aa33.81■■■■□ 3
RTKN-205ENST00000464094 SLC52A1Q9NWF4 448 aa33.8■■■■□ 3
RTKN-205ENST00000464094 TXNDC2Q86VQ3 553 aa33.79■■■■□ 3
RTKN-205ENST00000464094 STRCP1A6NGW2 1772 aa33.79■■■■□ 3
RTKN-205ENST00000464094 NAIPQ13075 1403 aa33.76■■■□□ 2.99
RTKN-205ENST00000464094 EID1Q9Y6B2 187 aa33.75■■■□□ 2.99
RTKN-205ENST00000464094 TMEM131LA2VDJ0 1609 aa33.74■■■□□ 2.99
RTKN-205ENST00000464094 HFM1A2PYH4 1435 aa33.68■■■□□ 2.98
RTKN-205ENST00000464094 SPHKAPQ2M3C7 1700 aa33.67■■■□□ 2.98
RTKN-205ENST00000464094 ZFYVE9O95405 1425 aa33.63■■■□□ 2.97
RTKN-205ENST00000464094 UBAP1LF5GYI3 381 aa33.62■■■□□ 2.97
RTKN-205ENST00000464094 LRRC7Q96NW7 1537 aa33.6■■■□□ 2.97
RTKN-205ENST00000464094 RIMS2Q9UQ26 1411 aa33.57■■■□□ 2.96
RTKN-205ENST00000464094 XIRP1Q702N8 1843 aaKnown RBP33.54■■■□□ 2.96
RTKN-205ENST00000464094 CHGAP10645 457 aaKnown RBP33.53■■■□□ 2.96
RTKN-205ENST00000464094 ALKQ9UM73 1620 aa33.51■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms