RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 ADGBQ8N7X0 1667 aa19.39■□□□□ 0.69
RPA3-206ENST00000463632 CEP170BQ9Y4F5 1589 aaPredicted RBP19.36■□□□□ 0.69
RPA3-206ENST00000463632 LRRC9Q6ZRR7 1453 aa19.36■□□□□ 0.69
RPA3-206ENST00000463632 MYO3AQ8NEV4 1616 aa19.35■□□□□ 0.69
RPA3-206ENST00000463632 A2ML1A8K2U0 1454 aa19.35■□□□□ 0.69
RPA3-206ENST00000463632 PLA2R1Q13018 1463 aa19.35■□□□□ 0.69
RPA3-206ENST00000463632 SCAF1Q9H7N4 1312 aaKnown RBP19.34■□□□□ 0.69
RPA3-206ENST00000463632 LTBP4Q8N2S1 1624 aa19.34■□□□□ 0.69
RPA3-206ENST00000463632 ANKLE2Q86XL3 938 aa19.34■□□□□ 0.69
RPA3-206ENST00000463632 THEMISQ8N1K5 641 aaPredicted RBP19.33■□□□□ 0.68
RPA3-206ENST00000463632 KDM5DQ9BY66 1539 aa19.32■□□□□ 0.68
RPA3-206ENST00000463632 TCOF1Q13428 1488 aaKnown RBP19.3■□□□□ 0.68
RPA3-206ENST00000463632 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.3■□□□□ 0.68
RPA3-206ENST00000463632 PZPP20742 1482 aa19.29■□□□□ 0.68
RPA3-206ENST00000463632 MIA2Q96PC5 1412 aa19.29■□□□□ 0.68
RPA3-206ENST00000463632 IQSEC2Q5JU85 1478 aa19.28■□□□□ 0.68
RPA3-206ENST00000463632 MYOM3Q5VTT5 1437 aa19.27■□□□□ 0.68
RPA3-206ENST00000463632 PIP4K2BP78356 416 aa19.27■□□□□ 0.68
RPA3-206ENST00000463632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.27■□□□□ 0.683e-6■■■□□ 17.7
RPA3-206ENST00000463632 RRP7BPQ9NSQ0 103 aa19.27■□□□□ 0.68
RPA3-206ENST00000463632 ARHGEF5Q12774 1597 aa19.27■□□□□ 0.67
RPA3-206ENST00000463632 ZNF142P52746 1687 aaPredicted RBP19.26■□□□□ 0.67
RPA3-206ENST00000463632 ILDR2Q71H61 639 aa19.25■□□□□ 0.67
RPA3-206ENST00000463632 DNMT1P26358 1616 aaKnown RBP19.24■□□□□ 0.67
RPA3-206ENST00000463632 FAM135AQ9P2D6 1515 aa19.24■□□□□ 0.67
RPA3-206ENST00000463632 SENP3Q9H4L4 574 aaPredicted RBP19.23■□□□□ 0.67
RPA3-206ENST00000463632 NLRP1Q9C000 1473 aa19.22■□□□□ 0.67
RPA3-206ENST00000463632 TOM1O60784 492 aa19.22■□□□□ 0.67
RPA3-206ENST00000463632 MAP3K1Q13233 1512 aa19.21■□□□□ 0.67
RPA3-206ENST00000463632 CHIC2Q9UKJ5 165 aa19.21■□□□□ 0.67
RPA3-206ENST00000463632 KIF15Q9NS87 1388 aa19.2■□□□□ 0.66
RPA3-206ENST00000463632 UGGT1Q9NYU2 1555 aa19.2■□□□□ 0.66
RPA3-206ENST00000463632 NPHP4O75161 1426 aaPredicted RBP19.19■□□□□ 0.66
RPA3-206ENST00000463632 STAG3Q9UJ98 1225 aa19.19■□□□□ 0.66
RPA3-206ENST00000463632 SHANK2Q9UPX8 1470 aa19.17■□□□□ 0.66
RPA3-206ENST00000463632 ABCC3O15438 1527 aa19.17■□□□□ 0.66
RPA3-206ENST00000463632 DUOX2Q9NRD8 1548 aa19.15■□□□□ 0.66
RPA3-206ENST00000463632 MAST1Q9Y2H9 1570 aa19.15■□□□□ 0.66
RPA3-206ENST00000463632 FAM50AQ14320 339 aaKnown RBP19.15■□□□□ 0.66
RPA3-206ENST00000463632 KANK1Q14678 1352 aa19.15■□□□□ 0.66
RPA3-206ENST00000463632 ABCC5O15440 1437 aa19.15■□□□□ 0.66
RPA3-206ENST00000463632 ERVK-7P63135 1459 aa19.15■□□□□ 0.66
RPA3-206ENST00000463632 SOCS7O14512 581 aa19.14■□□□□ 0.65
RPA3-206ENST00000463632 HSPA1LP34931 641 aa19.14■□□□□ 0.65
RPA3-206ENST00000463632 TXNDC2Q86VQ3 553 aa19.14■□□□□ 0.65
RPA3-206ENST00000463632 SPATA31D1Q6ZQQ2 1576 aa19.14■□□□□ 0.65
RPA3-206ENST00000463632 EID1Q9Y6B2 187 aa19.13■□□□□ 0.65
RPA3-206ENST00000463632 CPS1P31327 1500 aa19.13■□□□□ 0.65
RPA3-206ENST00000463632 NEURL4Q96JN8 1562 aa19.11■□□□□ 0.65
RPA3-206ENST00000463632 ANKRD30AQ9BXX3 1397 aa19.11■□□□□ 0.65
RPA3-206ENST00000463632 RNF17Q9BXT8 1623 aaKnown RBP19.11■□□□□ 0.65
RPA3-206ENST00000463632 DAPK1P53355 1430 aa19.1■□□□□ 0.65
RPA3-206ENST00000463632 FGD6Q6ZV73 1430 aa19.09■□□□□ 0.65
RPA3-206ENST00000463632 ERBINQ96RT1 1412 aa19.09■□□□□ 0.65
RPA3-206ENST00000463632 PTPN23Q9H3S7 1636 aa19.08■□□□□ 0.65
RPA3-206ENST00000463632 EIF2AK4Q9P2K8 1649 aaKnown RBP19.08■□□□□ 0.65
RPA3-206ENST00000463632 MED14O60244 1454 aa19.08■□□□□ 0.64
RPA3-206ENST00000463632 LTKP29376 864 aa19.07■□□□□ 0.64
RPA3-206ENST00000463632 BCANQ96GW7 911 aa19.07■□□□□ 0.64
RPA3-206ENST00000463632 POLR1AO95602 1720 aaPredicted RBP19.07■□□□□ 0.64
RPA3-206ENST00000463632 ZC3H13Q5T200 1668 aaKnown RBP19.06■□□□□ 0.64
RPA3-206ENST00000463632 SCAF11Q99590 1463 aaKnown RBP19.04■□□□□ 0.64
RPA3-206ENST00000463632 MROH1Q8NDA8 1641 aa19.03■□□□□ 0.64
RPA3-206ENST00000463632 VWDEQ8N2E2 1590 aa19.03■□□□□ 0.64
RPA3-206ENST00000463632 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
RPA3-206ENST00000463632 DEPDC5O75140 1603 aa19.03■□□□□ 0.64
RPA3-206ENST00000463632 ARHGAP31Q2M1Z3 1444 aa19.02■□□□□ 0.64
RPA3-206ENST00000463632 IDI1Q13907 227 aa19.02■□□□□ 0.64
RPA3-206ENST00000463632 CEP152O94986 1710 aa19.02■□□□□ 0.63
RPA3-206ENST00000463632 IQGAP1P46940 1657 aa19■□□□□ 0.63
RPA3-206ENST00000463632 PRDM15P57071 1507 aaPredicted RBP18.99■□□□□ 0.63
RPA3-206ENST00000463632 TMEM2Q9UHN6 1383 aa18.98■□□□□ 0.63
RPA3-206ENST00000463632 LRRC7Q96NW7 1537 aa18.97■□□□□ 0.63
RPA3-206ENST00000463632 SLC26A8Q96RN1 970 aa18.97■□□□□ 0.63
RPA3-206ENST00000463632 CFAP65Q6ZU64 1925 aaKnown RBP18.96■□□□□ 0.63
RPA3-206ENST00000463632 CHGAP10645 457 aaKnown RBP18.96■□□□□ 0.63
RPA3-206ENST00000463632 PPP1R15AO75807 674 aaPredicted RBP18.95■□□□□ 0.62
RPA3-206ENST00000463632 ITGAEP38570 1179 aa18.95■□□□□ 0.62
RPA3-206ENST00000463632 PROSER2Q86WR7 435 aaPredicted RBP18.94■□□□□ 0.62
RPA3-206ENST00000463632 SLC52A1Q9NWF4 448 aa18.94■□□□□ 0.62
RPA3-206ENST00000463632 ARHGAP23Q9P227 1491 aa18.94■□□□□ 0.62
RPA3-206ENST00000463632 CROCC2H7BZ55 1655 aa18.94■□□□□ 0.62
RPA3-206ENST00000463632 ANKRD50Q9ULJ7 1429 aa18.93■□□□□ 0.62
RPA3-206ENST00000463632 RBM33Q96EV2 1170 aaKnown RBP18.93■□□□□ 0.62
RPA3-206ENST00000463632 SLIT1O75093 1534 aa18.93■□□□□ 0.62
RPA3-206ENST00000463632 UBR1Q8IWV7 1749 aa18.92■□□□□ 0.62
RPA3-206ENST00000463632 PPARGC1BQ86YN6 1023 aaKnown RBP18.92■□□□□ 0.62
RPA3-206ENST00000463632 EFCAB6Q5THR3 1501 aa18.91■□□□□ 0.62
RPA3-206ENST00000463632 KCNA6P17658 529 aa18.9■□□□□ 0.62
RPA3-206ENST00000463632 HDGFP51858 240 aaKnown RBP18.9■□□□□ 0.62
RPA3-206ENST00000463632 PIK3C2BO00750 1634 aa18.89■□□□□ 0.62
RPA3-206ENST00000463632 LMTK2Q8IWU2 1503 aa18.89■□□□□ 0.61
RPA3-206ENST00000463632 MED1Q15648 1581 aaPredicted RBP18.89■□□□□ 0.61
RPA3-206ENST00000463632 TMEM94Q12767 1356 aa18.88■□□□□ 0.61
RPA3-206ENST00000463632 ADGRL2O95490 1459 aa18.88■□□□□ 0.61
RPA3-206ENST00000463632 SYNMO15061 1565 aa18.86■□□□□ 0.61
RPA3-206ENST00000463632 NOS1P29475 1434 aa18.86■□□□□ 0.61
RPA3-206ENST00000463632 NUTM2DQ5VT03 806 aaPredicted RBP18.85■□□□□ 0.61
RPA3-206ENST00000463632 C14orf37Q86TY3 774 aa18.84■□□□□ 0.61
RPA3-206ENST00000463632 STRCP1A6NGW2 1772 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms