RNA–Protein interactions for RNA: ENST00000463599.5

U2AF1-205, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-205ENST00000463599 CLCN1P35523 988 aa11.6□□□□□ -0.55
U2AF1-205ENST00000463599 FLIIQ13045 1269 aa11.6□□□□□ -0.55
U2AF1-205ENST00000463599 FBXW7Q969H0 707 aa11.6□□□□□ -0.55
U2AF1-205ENST00000463599 CDHR5Q9HBB8 845 aa11.6□□□□□ -0.55
U2AF1-205ENST00000463599 PCDHGA10Q9Y5H3 936 aa11.6□□□□□ -0.55
U2AF1-205ENST00000463599 RBM33Q96EV2 1170 aaKnown RBP11.59□□□□□ -0.55
U2AF1-205ENST00000463599 PCDHGA4Q9Y5G9 962 aa11.59□□□□□ -0.55
U2AF1-205ENST00000463599 MS4A1P11836 297 aa11.58□□□□□ -0.56
U2AF1-205ENST00000463599 PCMTD1Q96MG8 357 aaPredicted RBP11.58□□□□□ -0.56
U2AF1-205ENST00000463599 GPCPD1Q9NPB8 672 aa11.57□□□□□ -0.56
U2AF1-205ENST00000463599 CERKQ8TCT0 537 aa11.56□□□□□ -0.56
U2AF1-205ENST00000463599 TMUB1Q9BVT8 246 aa11.56□□□□□ -0.56
U2AF1-205ENST00000463599 REPIN1Q9BWE0 567 aaKnown RBP11.56□□□□□ -0.56
U2AF1-205ENST00000463599 TSR1Q2NL82 804 aaKnown RBP11.55□□□□□ -0.56
U2AF1-205ENST00000463599 JPH4Q96JJ6 628 aa11.55□□□□□ -0.56
U2AF1-205ENST00000463599 OATP04181 439 aa11.54□□□□□ -0.56
U2AF1-205ENST00000463599 MDM2Q00987 491 aaPredicted RBP11.53□□□□□ -0.56
U2AF1-205ENST00000463599 POTEIP0CG38 1075 aa11.52□□□□□ -0.57
U2AF1-205ENST00000463599 SSTR3P32745 418 aaPredicted RBP11.52□□□□□ -0.57
U2AF1-205ENST00000463599 KDM4FA0A1W2PPD8 638 aa11.51□□□□□ -0.57
U2AF1-205ENST00000463599 SH3D19Q5HYK7 790 aa11.51□□□□□ -0.57
U2AF1-205ENST00000463599 PHOX2BQ99453 314 aa11.5□□□□□ -0.57
U2AF1-205ENST00000463599 FOSBP53539 338 aa11.49□□□□□ -0.57
U2AF1-205ENST00000463599 C6orf132Q5T0Z8 1188 aa11.49□□□□□ -0.57
U2AF1-205ENST00000463599 SKIV2LQ15477 1246 aaKnown RBP11.48□□□□□ -0.57
U2AF1-205ENST00000463599 ZDHHC16Q969W1 377 aa11.48□□□□□ -0.57
U2AF1-205ENST00000463599 METTL3Q86U44 580 aaKnown RBP11.47□□□□□ -0.57
U2AF1-205ENST00000463599 BEGAINQ9BUH8 593 aa11.46□□□□□ -0.57
U2AF1-205ENST00000463599 RBM27Q9P2N5 1060 aaKnown RBP11.46□□□□□ -0.57
U2AF1-205ENST00000463599 ONECUT3O60422 494 aaPredicted RBP11.45□□□□□ -0.58
U2AF1-205ENST00000463599 ZNF454Q8N9F8 522 aa11.45□□□□□ -0.58
U2AF1-205ENST00000463599 FAM217BQ9NTX9 383 aaPredicted RBP11.45□□□□□ -0.58
U2AF1-205ENST00000463599 PADI6Q6TGC4 694 aa11.44□□□□□ -0.58
U2AF1-205ENST00000463599 PXYLP1Q8TE99 480 aa11.44□□□□□ -0.58
U2AF1-205ENST00000463599 ADGRG1Q9Y653 693 aa11.44□□□□□ -0.58
U2AF1-205ENST00000463599 DOK7Q18PE1 504 aa11.43□□□□□ -0.58
U2AF1-205ENST00000463599 FAM161AQ3B820 660 aa11.43□□□□□ -0.58
U2AF1-205ENST00000463599 TTC13Q8NBP0 860 aa11.43□□□□□ -0.58
U2AF1-205ENST00000463599 ATP1B4Q9UN42 357 aaPredicted RBP11.42□□□□□ -0.58
U2AF1-205ENST00000463599 A6NJR5 290 aa11.4□□□□□ -0.58
U2AF1-205ENST00000463599 RIMBP2O15034 1052 aa11.4□□□□□ -0.58
U2AF1-205ENST00000463599 PRSS12P56730 875 aa11.4□□□□□ -0.58
U2AF1-205ENST00000463599 RBM46Q8TBY0 533 aaKnown RBP11.4□□□□□ -0.58
U2AF1-205ENST00000463599 ZSWIM6Q9HCJ5 1215 aa11.4□□□□□ -0.58
U2AF1-205ENST00000463599 NUDT7P0C024 238 aa11.39□□□□□ -0.59
U2AF1-205ENST00000463599 UBTFP17480 764 aaKnown RBP11.38□□□□□ -0.59
U2AF1-205ENST00000463599 DIXDC1Q155Q3 683 aa11.38□□□□□ -0.59
U2AF1-205ENST00000463599 ARSIQ5FYB1 569 aa11.38□□□□□ -0.59
U2AF1-205ENST00000463599 ADAM33Q9BZ11 813 aa11.38□□□□□ -0.59
U2AF1-205ENST00000463599 APBB1O00213 710 aa11.37□□□□□ -0.59
U2AF1-205ENST00000463599 CDCA7LQ96GN5 454 aa11.37□□□□□ -0.59
U2AF1-205ENST00000463599 POLR3EQ9NVU0 708 aa11.37□□□□□ -0.59
U2AF1-205ENST00000463599 PROCA1Q8NCQ7 364 aaPredicted RBP11.36□□□□□ -0.59
U2AF1-205ENST00000463599 NLRP7Q8WX94 980 aa11.36□□□□□ -0.59
U2AF1-205ENST00000463599 MCM6Q14566 821 aa11.34□□□□□ -0.59
U2AF1-205ENST00000463599 MYSM1Q5VVJ2 828 aa11.34□□□□□ -0.59
U2AF1-205ENST00000463599 GPR153Q6NV75 609 aa11.34□□□□□ -0.59
U2AF1-205ENST00000463599 KHSRPQ92945 711 aaKnown RBP eCLIP11.34□□□□□ -0.59
U2AF1-205ENST00000463599 ARID3AQ99856 593 aa11.34□□□□□ -0.59
U2AF1-205ENST00000463599 C1orf115Q9H7X2 142 aa11.34□□□□□ -0.59
U2AF1-205ENST00000463599 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.33□□□□□ -0.6
U2AF1-205ENST00000463599 PSDA5PKW4 1024 aaPredicted RBP11.33□□□□□ -0.6
U2AF1-205ENST00000463599 TRAK2O60296 914 aa11.33□□□□□ -0.6
U2AF1-205ENST00000463599 HOXB3P14651 431 aaPredicted RBP11.33□□□□□ -0.6
U2AF1-205ENST00000463599 CLUAP1Q96AJ1 413 aa11.33□□□□□ -0.6
U2AF1-205ENST00000463599 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.33□□□□□ -0.6
U2AF1-205ENST00000463599 ARID3CA6NKF2 412 aa11.32□□□□□ -0.6
U2AF1-205ENST00000463599 ZNF710Q8N1W2 664 aa11.32□□□□□ -0.6
U2AF1-205ENST00000463599 TBC1D2Q9BYX2 928 aa11.32□□□□□ -0.6
U2AF1-205ENST00000463599 CLK2P49760 499 aaKnown RBP11.31□□□□□ -0.6
U2AF1-205ENST00000463599 PPP4R3BQ5MIZ7 849 aa11.31□□□□□ -0.6
U2AF1-205ENST00000463599 RCCD1A6NED2 376 aa11.28□□□□□ -0.6
U2AF1-205ENST00000463599 RAD21O60216 631 aa11.28□□□□□ -0.6
U2AF1-205ENST00000463599 BANK1Q8NDB2 785 aa11.28□□□□□ -0.6
U2AF1-205ENST00000463599 EYA1Q99502 592 aa11.28□□□□□ -0.6
U2AF1-205ENST00000463599 BCL2L12Q9HB09 334 aa11.28□□□□□ -0.6
U2AF1-205ENST00000463599 LHX6Q9UPM6 363 aa11.28□□□□□ -0.6
U2AF1-205ENST00000463599 SULF1Q8IWU6 871 aa11.27□□□□□ -0.61
U2AF1-205ENST00000463599 SPDYE5A6NIY4 337 aa11.26□□□□□ -0.61
U2AF1-205ENST00000463599 PTPREP23469 700 aa11.26□□□□□ -0.61
U2AF1-205ENST00000463599 PPP1R3GB7ZBB8 358 aa11.25□□□□□ -0.61
U2AF1-205ENST00000463599 POTEJP0CG39 1038 aa11.25□□□□□ -0.61
U2AF1-205ENST00000463599 COL9A1P20849 921 aa11.25□□□□□ -0.61
U2AF1-205ENST00000463599 TMEM259Q4ZIN3 620 aa11.25□□□□□ -0.61
U2AF1-205ENST00000463599 MAMSTRQ6ZN01 415 aa11.25□□□□□ -0.61
U2AF1-205ENST00000463599 RIC3Q7Z5B4 369 aa11.25□□□□□ -0.61
U2AF1-205ENST00000463599 SCUBE2Q9NQ36 999 aa11.25□□□□□ -0.61
U2AF1-205ENST00000463599 FAM198AQ9UFP1 575 aa11.25□□□□□ -0.61
U2AF1-205ENST00000463599 RFC5P40937 340 aa11.24□□□□□ -0.61
U2AF1-205ENST00000463599 PROSER2Q86WR7 435 aaPredicted RBP11.24□□□□□ -0.61
U2AF1-205ENST00000463599 SPIRE2Q8WWL2 714 aa11.24□□□□□ -0.61
U2AF1-205ENST00000463599 CD46P15529 392 aa11.23□□□□□ -0.61
U2AF1-205ENST00000463599 TUSC1Q2TAM9 212 aa11.23□□□□□ -0.61
U2AF1-205ENST00000463599 NUDT18Q6ZVK8 323 aa11.23□□□□□ -0.61
U2AF1-205ENST00000463599 PACS2Q86VP3 889 aa11.23□□□□□ -0.61
U2AF1-205ENST00000463599 TSKSQ9UJT2 592 aa11.23□□□□□ -0.61
U2AF1-205ENST00000463599 NBPF26B4DH59 902 aa11.22□□□□□ -0.61
U2AF1-205ENST00000463599 DNAJB2P25686 324 aa11.22□□□□□ -0.61
U2AF1-205ENST00000463599 PPP2R2DQ66LE6 453 aa11.22□□□□□ -0.61
U2AF1-205ENST00000463599 LHX8Q68G74 356 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms