RNA–Protein interactions for RNA: ENST00000463591.1

PRDM16-204, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 384 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-204ENST00000463591 PTPRTO14522 1441 aa31.74■■■□□ 2.67
PRDM16-204ENST00000463591 ABCC5O15440 1437 aa31.72■■■□□ 2.67
PRDM16-204ENST00000463591 TCOF1Q13428 1488 aaKnown RBP31.72■■■□□ 2.67
PRDM16-204ENST00000463591 NCOA1Q15788 1441 aa31.71■■■□□ 2.67
PRDM16-204ENST00000463591 SHANK2Q9UPX8 1470 aa31.7■■■□□ 2.66
PRDM16-204ENST00000463591 PZPP20742 1482 aa31.68■■■□□ 2.66
PRDM16-204ENST00000463591 CERKQ8TCT0 537 aa31.68■■■□□ 2.66
PRDM16-204ENST00000463591 DUOX2Q9NRD8 1548 aa31.68■■■□□ 2.66
PRDM16-204ENST00000463591 EIF2AK4Q9P2K8 1649 aaKnown RBP31.67■■■□□ 2.66
PRDM16-204ENST00000463591 MYO3AQ8NEV4 1616 aa31.67■■■□□ 2.66
PRDM16-204ENST00000463591 CAMSAP1Q5T5Y3 1602 aa31.66■■■□□ 2.66
PRDM16-204ENST00000463591 RNF17Q9BXT8 1623 aaKnown RBP31.66■■■□□ 2.66
PRDM16-204ENST00000463591 DAPK1P53355 1430 aa31.66■■■□□ 2.66
PRDM16-204ENST00000463591 ZNF142P52746 1687 aaPredicted RBP31.65■■■□□ 2.66
PRDM16-204ENST00000463591 FBXO31Q5XUX0 539 aaPredicted RBP31.65■■■□□ 2.66
PRDM16-204ENST00000463591 CEP170BQ9Y4F5 1589 aaPredicted RBP31.64■■■□□ 2.66
PRDM16-204ENST00000463591 TNRQ92752 1358 aa31.64■■■□□ 2.66
PRDM16-204ENST00000463591 KIF15Q9NS87 1388 aa31.64■■■□□ 2.66
PRDM16-204ENST00000463591 PKD2Q13563 968 aa31.63■■■□□ 2.65
PRDM16-204ENST00000463591 RRP7BPQ9NSQ0 103 aa31.63■■■□□ 2.65
PRDM16-204ENST00000463591 DNMT1P26358 1616 aaKnown RBP31.62■■■□□ 2.65
PRDM16-204ENST00000463591 PLA2R1Q13018 1463 aa31.62■■■□□ 2.65
PRDM16-204ENST00000463591 CROCC2H7BZ55 1655 aa31.61■■■□□ 2.65
PRDM16-204ENST00000463591 A2ML1A8K2U0 1454 aa31.61■■■□□ 2.65
PRDM16-204ENST00000463591 ERBINQ96RT1 1412 aa31.58■■■□□ 2.65
PRDM16-204ENST00000463591 ANKRD30AQ9BXX3 1397 aa31.57■■■□□ 2.64
PRDM16-204ENST00000463591 NCKAP5LQ9HCH0 1330 aa31.57■■■□□ 2.64
PRDM16-204ENST00000463591 ABCC3O15438 1527 aa31.57■■■□□ 2.64
PRDM16-204ENST00000463591 ZC3H13Q5T200 1668 aaKnown RBP31.57■■■□□ 2.64
PRDM16-204ENST00000463591 CHIC2Q9UKJ5 165 aa31.54■■■□□ 2.64
PRDM16-204ENST00000463591 FAM50AQ14320 339 aaKnown RBP31.53■■■□□ 2.64
PRDM16-204ENST00000463591 MROH1Q8NDA8 1641 aa31.53■■■□□ 2.64
PRDM16-204ENST00000463591 NLRP1Q9C000 1473 aa31.52■■■□□ 2.64
PRDM16-204ENST00000463591 THEMISQ8N1K5 641 aaPredicted RBP31.5■■■□□ 2.63
PRDM16-204ENST00000463591 ADGRL2O95490 1459 aa31.46■■■□□ 2.63
PRDM16-204ENST00000463591 KANK1Q14678 1352 aa31.45■■■□□ 2.63
PRDM16-204ENST00000463591 PRDM15P57071 1507 aaPredicted RBP31.45■■■□□ 2.63
PRDM16-204ENST00000463591 SPATA31D1Q6ZQQ2 1576 aa31.44■■■□□ 2.62
PRDM16-204ENST00000463591 ARHGAP31Q2M1Z3 1444 aa31.43■■■□□ 2.62
PRDM16-204ENST00000463591 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.43■■■□□ 2.62
PRDM16-204ENST00000463591 ERVK-7P63135 1459 aa31.43■■■□□ 2.62
PRDM16-204ENST00000463591 ANKLE2Q86XL3 938 aa31.41■■■□□ 2.62
PRDM16-204ENST00000463591 LTBP4Q8N2S1 1624 aa31.41■■■□□ 2.62
PRDM16-204ENST00000463591 CEP152O94986 1710 aa31.41■■■□□ 2.62
PRDM16-204ENST00000463591 UGGT1Q9NYU2 1555 aa31.4■■■□□ 2.62
PRDM16-204ENST00000463591 DEPDC5O75140 1603 aa31.39■■■□□ 2.62
PRDM16-204ENST00000463591 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.38■■■□□ 2.61
PRDM16-204ENST00000463591 IQSEC2Q5JU85 1478 aa31.34■■■□□ 2.61
PRDM16-204ENST00000463591 ZNF335Q9H4Z2 1342 aaPredicted RBP31.34■■■□□ 2.61
PRDM16-204ENST00000463591 LMTK2Q8IWU2 1503 aa31.33■■■□□ 2.61
PRDM16-204ENST00000463591 ANKRD50Q9ULJ7 1429 aa31.32■■■□□ 2.6
PRDM16-204ENST00000463591 VWDEQ8N2E2 1590 aa31.3■■■□□ 2.6
PRDM16-204ENST00000463591 POLR1AO95602 1720 aaPredicted RBP31.3■■■□□ 2.6
PRDM16-204ENST00000463591 CFAP65Q6ZU64 1925 aaKnown RBP31.29■■■□□ 2.6
PRDM16-204ENST00000463591 NEURL4Q96JN8 1562 aa31.28■■■□□ 2.6
PRDM16-204ENST00000463591 MED14O60244 1454 aa31.27■■■□□ 2.6
PRDM16-204ENST00000463591 PPARGC1BQ86YN6 1023 aaKnown RBP31.26■■■□□ 2.59
PRDM16-204ENST00000463591 ROCK1Q13464 1354 aa31.26■■■□□ 2.59
PRDM16-204ENST00000463591 NPHP4O75161 1426 aaPredicted RBP31.23■■■□□ 2.59
PRDM16-204ENST00000463591 UBR1Q8IWV7 1749 aa31.2■■■□□ 2.58
PRDM16-204ENST00000463591 EFCAB6Q5THR3 1501 aa31.17■■■□□ 2.58
PRDM16-204ENST00000463591 IDI1Q13907 227 aa31.16■■■□□ 2.58
PRDM16-204ENST00000463591 STAG3Q9UJ98 1225 aa31.16■■■□□ 2.58
PRDM16-204ENST00000463591 NOS1P29475 1434 aa31.15■■■□□ 2.58
PRDM16-204ENST00000463591 ITGAEP38570 1179 aa31.14■■■□□ 2.58
PRDM16-204ENST00000463591 SLC52A1Q9NWF4 448 aa31.14■■■□□ 2.58
PRDM16-204ENST00000463591 EID1Q9Y6B2 187 aa31.14■■■□□ 2.58
PRDM16-204ENST00000463591 RPRD2Q5VT52 1461 aaKnown RBP31.14■■■□□ 2.57
PRDM16-204ENST00000463591 ARHGAP23Q9P227 1491 aa31.14■■■□□ 2.57
PRDM16-204ENST00000463591 SLIT1O75093 1534 aa31.14■■■□□ 2.57
PRDM16-204ENST00000463591 CPS1P31327 1500 aa31.14■■■□□ 2.57
PRDM16-204ENST00000463591 TXNDC2Q86VQ3 553 aa31.13■■■□□ 2.57
PRDM16-204ENST00000463591 IQGAP1P46940 1657 aa31.12■■■□□ 2.57
PRDM16-204ENST00000463591 SCAF11Q99590 1463 aaKnown RBP31.11■■■□□ 2.57
PRDM16-204ENST00000463591 LTKP29376 864 aa31.1■■■□□ 2.57
PRDM16-204ENST00000463591 PIK3C2BO00750 1634 aa31.09■■■□□ 2.57
PRDM16-204ENST00000463591 KDM5AP29375 1690 aaKnown RBP31.09■■■□□ 2.57
PRDM16-204ENST00000463591 UNC13BO14795 1591 aa31.08■■■□□ 2.57
PRDM16-204ENST00000463591 TMEM2Q9UHN6 1383 aa31.07■■■□□ 2.56
PRDM16-204ENST00000463591 UBAP1LF5GYI3 381 aa31.07■■■□□ 2.56
PRDM16-204ENST00000463591 SYNMO15061 1565 aa31.07■■■□□ 2.56
PRDM16-204ENST00000463591 TET3O43151 1660 aa31.06■■■□□ 2.56
PRDM16-204ENST00000463591 RRBP1Q9P2E9 1410 aaKnown RBP31.06■■■□□ 2.56
PRDM16-204ENST00000463591 GCC2Q8IWJ2 1684 aa31■■■□□ 2.55
PRDM16-204ENST00000463591 NUP155O75694 1391 aa31■■■□□ 2.55
PRDM16-204ENST00000463591 TOM1O60784 492 aa30.98■■■□□ 2.55
PRDM16-204ENST00000463591 IQGAP3Q86VI3 1631 aa30.97■■■□□ 2.55
PRDM16-204ENST00000463591 ADGRB3O60242 1522 aa30.97■■■□□ 2.55
PRDM16-204ENST00000463591 HDGFP51858 240 aaKnown RBP30.93■■■□□ 2.54
PRDM16-204ENST00000463591 E9PCH4 1651 aa30.9■■■□□ 2.54
PRDM16-204ENST00000463591 LRRC7Q96NW7 1537 aa30.88■■■□□ 2.53
PRDM16-204ENST00000463591 STRCP1A6NGW2 1772 aa30.87■■■□□ 2.53
PRDM16-204ENST00000463591 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.84■■■□□ 2.53
PRDM16-204ENST00000463591 NAIPQ13075 1403 aa30.83■■■□□ 2.53
PRDM16-204ENST00000463591 CHGAP10645 457 aaKnown RBP30.83■■■□□ 2.53
PRDM16-204ENST00000463591 PIP4K2BP78356 416 aa30.83■■■□□ 2.53
PRDM16-204ENST00000463591 TMEM131LA2VDJ0 1609 aa30.83■■■□□ 2.53
PRDM16-204ENST00000463591 ZFYVE9O95405 1425 aa30.82■■■□□ 2.52
PRDM16-204ENST00000463591 SLC26A8Q96RN1 970 aa30.82■■■□□ 2.52
PRDM16-204ENST00000463591 RIMS2Q9UQ26 1411 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms