RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 UBAP1LF5GYI3 381 aa24.31■■□□□ 1.48
CMSS1-202ENST00000463526 ZNF142P52746 1687 aaPredicted RBP24.3■■□□□ 1.48
CMSS1-202ENST00000463526 TNRQ92752 1358 aa24.3■■□□□ 1.48
CMSS1-202ENST00000463526 ILDR2Q71H61 639 aa24.3■■□□□ 1.48
CMSS1-202ENST00000463526 A2ML1A8K2U0 1454 aa24.3■■□□□ 1.48
CMSS1-202ENST00000463526 TCOF1Q13428 1488 aaKnown RBP24.3■■□□□ 1.48
CMSS1-202ENST00000463526 IQSEC2Q5JU85 1478 aa24.29■■□□□ 1.48
CMSS1-202ENST00000463526 KANK4Q5T7N3 995 aaPredicted RBP24.27■■□□□ 1.48
CMSS1-202ENST00000463526 VPS8Q8N3P4 1428 aa24.27■■□□□ 1.48
CMSS1-202ENST00000463526 LRRC9Q6ZRR7 1453 aa24.25■■□□□ 1.47
CMSS1-202ENST00000463526 KDM5DQ9BY66 1539 aa24.25■■□□□ 1.47
CMSS1-202ENST00000463526 DNMT1P26358 1616 aaKnown RBP24.24■■□□□ 1.47
CMSS1-202ENST00000463526 PZPP20742 1482 aa24.23■■□□□ 1.47
CMSS1-202ENST00000463526 ARHGEF5Q12774 1597 aa24.21■■□□□ 1.47
CMSS1-202ENST00000463526 MIA2Q96PC5 1412 aa24.2■■□□□ 1.46
CMSS1-202ENST00000463526 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.2■■□□□ 1.46
CMSS1-202ENST00000463526 ANKLE2Q86XL3 938 aa24.2■■□□□ 1.46
CMSS1-202ENST00000463526 THEMISQ8N1K5 641 aaPredicted RBP24.19■■□□□ 1.46
CMSS1-202ENST00000463526 SCAF1Q9H7N4 1312 aaKnown RBP24.16■■□□□ 1.46
CMSS1-202ENST00000463526 FAM135AQ9P2D6 1515 aa24.15■■□□□ 1.46
CMSS1-202ENST00000463526 SPATA31D1Q6ZQQ2 1576 aa24.14■■□□□ 1.45
CMSS1-202ENST00000463526 PIP4K2BP78356 416 aa24.13■■□□□ 1.45
CMSS1-202ENST00000463526 MYOM3Q5VTT5 1437 aa24.12■■□□□ 1.45
CMSS1-202ENST00000463526 NLRP1Q9C000 1473 aa24.12■■□□□ 1.45
CMSS1-202ENST00000463526 SOCS7O14512 581 aa24.11■■□□□ 1.45
CMSS1-202ENST00000463526 NEURL4Q96JN8 1562 aa24.11■■□□□ 1.45
CMSS1-202ENST00000463526 UGGT1Q9NYU2 1555 aa24.11■■□□□ 1.45
CMSS1-202ENST00000463526 SHANK2Q9UPX8 1470 aa24.09■■□□□ 1.45
CMSS1-202ENST00000463526 APLP2Q06481 763 aa24.09■■□□□ 1.45
CMSS1-202ENST00000463526 ABCC3O15438 1527 aa24.09■■□□□ 1.45
CMSS1-202ENST00000463526 MAST1Q9Y2H9 1570 aa24.08■■□□□ 1.45
CMSS1-202ENST00000463526 NPHP4O75161 1426 aaPredicted RBP24.08■■□□□ 1.44
CMSS1-202ENST00000463526 POLR1AO95602 1720 aaPredicted RBP24.07■■□□□ 1.44
CMSS1-202ENST00000463526 MAP3K1Q13233 1512 aa24.07■■□□□ 1.44
CMSS1-202ENST00000463526 TOM1O60784 492 aa24.07■■□□□ 1.44
CMSS1-202ENST00000463526 RRP7BPQ9NSQ0 103 aa24.07■■□□□ 1.44
CMSS1-202ENST00000463526 RNF17Q9BXT8 1623 aaKnown RBP24.06■■□□□ 1.44
CMSS1-202ENST00000463526 HSPA1LP34931 641 aa24.05■■□□□ 1.44
CMSS1-202ENST00000463526 CPS1P31327 1500 aa24.05■■□□□ 1.44
CMSS1-202ENST00000463526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.04■■□□□ 1.442e-10■■■■□ 23
CMSS1-202ENST00000463526 ERVK-7P63135 1459 aa24.03■■□□□ 1.44
CMSS1-202ENST00000463526 KIF15Q9NS87 1388 aa24.02■■□□□ 1.44
CMSS1-202ENST00000463526 MED14O60244 1454 aa24■■□□□ 1.43
CMSS1-202ENST00000463526 DUOX2Q9NRD8 1548 aa24■■□□□ 1.43
CMSS1-202ENST00000463526 ABCC5O15440 1437 aa24■■□□□ 1.43
CMSS1-202ENST00000463526 VWDEQ8N2E2 1590 aa23.99■■□□□ 1.43
CMSS1-202ENST00000463526 MROH1Q8NDA8 1641 aa23.99■■□□□ 1.43
CMSS1-202ENST00000463526 EIF2AK4Q9P2K8 1649 aaKnown RBP23.99■■□□□ 1.43
CMSS1-202ENST00000463526 CFAP65Q6ZU64 1925 aaKnown RBP23.98■■□□□ 1.43
CMSS1-202ENST00000463526 SENP3Q9H4L4 574 aaPredicted RBP23.98■■□□□ 1.43
CMSS1-202ENST00000463526 CHIC2Q9UKJ5 165 aa23.98■■□□□ 1.43
CMSS1-202ENST00000463526 ZC3H13Q5T200 1668 aaKnown RBP23.98■■□□□ 1.43
CMSS1-202ENST00000463526 CEP152O94986 1710 aa23.97■■□□□ 1.43
CMSS1-202ENST00000463526 DEPDC5O75140 1603 aa23.96■■□□□ 1.43
CMSS1-202ENST00000463526 TXNDC2Q86VQ3 553 aa23.94■■□□□ 1.42
CMSS1-202ENST00000463526 IQGAP1P46940 1657 aa23.93■■□□□ 1.42
CMSS1-202ENST00000463526 PTPN23Q9H3S7 1636 aa23.93■■□□□ 1.42
CMSS1-202ENST00000463526 LTKP29376 864 aa23.93■■□□□ 1.42
CMSS1-202ENST00000463526 DAPK1P53355 1430 aa23.93■■□□□ 1.42
CMSS1-202ENST00000463526 ERBINQ96RT1 1412 aa23.92■■□□□ 1.42
CMSS1-202ENST00000463526 STAG3Q9UJ98 1225 aa23.91■■□□□ 1.42
CMSS1-202ENST00000463526 FGD6Q6ZV73 1430 aa23.9■■□□□ 1.42
CMSS1-202ENST00000463526 KANK1Q14678 1352 aa23.9■■□□□ 1.42
CMSS1-202ENST00000463526 SCAF11Q99590 1463 aaKnown RBP23.88■■□□□ 1.41
CMSS1-202ENST00000463526 ARHGAP31Q2M1Z3 1444 aa23.88■■□□□ 1.41
CMSS1-202ENST00000463526 EID1Q9Y6B2 187 aa23.88■■□□□ 1.41
CMSS1-202ENST00000463526 LRRC7Q96NW7 1537 aa23.88■■□□□ 1.41
CMSS1-202ENST00000463526 PRDM15P57071 1507 aaPredicted RBP23.87■■□□□ 1.41
CMSS1-202ENST00000463526 ANKRD30AQ9BXX3 1397 aa23.87■■□□□ 1.41
CMSS1-202ENST00000463526 UBR1Q8IWV7 1749 aa23.87■■□□□ 1.41
CMSS1-202ENST00000463526 CROCC2H7BZ55 1655 aa23.85■■□□□ 1.41
CMSS1-202ENST00000463526 STRCP1A6NGW2 1772 aa23.85■■□□□ 1.41
CMSS1-202ENST00000463526 FAM50AQ14320 339 aaKnown RBP23.84■■□□□ 1.41
CMSS1-202ENST00000463526 IDI1Q13907 227 aa23.83■■□□□ 1.41
CMSS1-202ENST00000463526 ALKQ9UM73 1620 aa23.83■■□□□ 1.41
CMSS1-202ENST00000463526 ARHGAP23Q9P227 1491 aa23.82■■□□□ 1.4
CMSS1-202ENST00000463526 SLIT1O75093 1534 aa23.81■■□□□ 1.4
CMSS1-202ENST00000463526 MED1Q15648 1581 aaPredicted RBP23.81■■□□□ 1.4
CMSS1-202ENST00000463526 TMEM2Q9UHN6 1383 aa23.8■■□□□ 1.4
CMSS1-202ENST00000463526 PHF23Q9BUL5 403 aaPredicted RBP23.79■■□□□ 1.4
CMSS1-202ENST00000463526 PIK3C2BO00750 1634 aa23.78■■□□□ 1.4
CMSS1-202ENST00000463526 SYNMO15061 1565 aa23.75■■□□□ 1.39
CMSS1-202ENST00000463526 SLC26A8Q96RN1 970 aa23.75■■□□□ 1.39
CMSS1-202ENST00000463526 BCANQ96GW7 911 aa23.74■■□□□ 1.39
CMSS1-202ENST00000463526 EFCAB6Q5THR3 1501 aa23.73■■□□□ 1.39
CMSS1-202ENST00000463526 LMTK2Q8IWU2 1503 aa23.73■■□□□ 1.39
CMSS1-202ENST00000463526 RBM33Q96EV2 1170 aaKnown RBP23.72■■□□□ 1.39
CMSS1-202ENST00000463526 NOS1P29475 1434 aa23.69■■□□□ 1.38
CMSS1-202ENST00000463526 KCNA6P17658 529 aa23.69■■□□□ 1.38
CMSS1-202ENST00000463526 PROSER2Q86WR7 435 aaPredicted RBP23.69■■□□□ 1.38
CMSS1-202ENST00000463526 SLC52A1Q9NWF4 448 aa23.69■■□□□ 1.38
CMSS1-202ENST00000463526 ANKRD50Q9ULJ7 1429 aa23.68■■□□□ 1.38
CMSS1-202ENST00000463526 TMEM94Q12767 1356 aa23.68■■□□□ 1.38
CMSS1-202ENST00000463526 ADGRL2O95490 1459 aa23.68■■□□□ 1.38
CMSS1-202ENST00000463526 CHGAP10645 457 aaKnown RBP23.63■■□□□ 1.37
CMSS1-202ENST00000463526 PPP1R15AO75807 674 aaPredicted RBP23.62■■□□□ 1.37
CMSS1-202ENST00000463526 ADGRB3O60242 1522 aa23.62■■□□□ 1.37
CMSS1-202ENST00000463526 XIRP1Q702N8 1843 aaKnown RBP23.61■■□□□ 1.37
CMSS1-202ENST00000463526 TET3O43151 1660 aa23.6■■□□□ 1.37
CMSS1-202ENST00000463526 KDM5AP29375 1690 aaKnown RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 802.6 ms