RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 TIAM1Q13009 1591 aa18.27■□□□□ 0.52
SSR3-202ENST00000463503 HNRNPMP52272 730 aaKnown RBP eCLIP18.26■□□□□ 0.512e-9■■□□□ 12.7
SSR3-202ENST00000463503 KDM5DQ9BY66 1539 aa18.26■□□□□ 0.51
SSR3-202ENST00000463503 PIP4K2BP78356 416 aa18.25■□□□□ 0.51
SSR3-202ENST00000463503 ZNF777Q9ULD5 760 aaPredicted RBP18.25■□□□□ 0.51
SSR3-202ENST00000463503 PZPP20742 1482 aa18.25■□□□□ 0.51
SSR3-202ENST00000463503 ZC3H13Q5T200 1668 aaKnown RBP18.25■□□□□ 0.51
SSR3-202ENST00000463503 XIRP1Q702N8 1843 aaKnown RBP18.24■□□□□ 0.51
SSR3-202ENST00000463503 MED14O60244 1454 aa18.24■□□□□ 0.51
SSR3-202ENST00000463503 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
SSR3-202ENST00000463503 MBD5Q9P267 1494 aa18.22■□□□□ 0.51
SSR3-202ENST00000463503 GGT6Q6P531 493 aa18.22■□□□□ 0.51
SSR3-202ENST00000463503 TOM1O60784 492 aa18.21■□□□□ 0.51
SSR3-202ENST00000463503 TNRQ92752 1358 aa18.2■□□□□ 0.5
SSR3-202ENST00000463503 UGGT1Q9NYU2 1555 aa18.19■□□□□ 0.5
SSR3-202ENST00000463503 RTEL1-TNFRSF6BF6WH68 1400 aa18.18■□□□□ 0.5
SSR3-202ENST00000463503 NLRP1Q9C000 1473 aa18.18■□□□□ 0.5
SSR3-202ENST00000463503 LRRC7Q96NW7 1537 aa18.17■□□□□ 0.5
SSR3-202ENST00000463503 CCNB3Q8WWL7 1395 aa18.17■□□□□ 0.5
SSR3-202ENST00000463503 NPHP4O75161 1426 aaPredicted RBP18.16■□□□□ 0.5
SSR3-202ENST00000463503 CFDP1Q9UEE9 299 aaPredicted RBP18.16■□□□□ 0.5
SSR3-202ENST00000463503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.16■□□□□ 0.5
SSR3-202ENST00000463503 UBR1Q8IWV7 1749 aa18.15■□□□□ 0.5
SSR3-202ENST00000463503 EHBP1L1Q8N3D4 1523 aa18.14■□□□□ 0.49
SSR3-202ENST00000463503 FBXO31Q5XUX0 539 aaPredicted RBP18.14■□□□□ 0.49
SSR3-202ENST00000463503 PHF23Q9BUL5 403 aaPredicted RBP18.14■□□□□ 0.49
SSR3-202ENST00000463503 DHX29Q7Z478 1369 aaKnown RBP18.14■□□□□ 0.49
SSR3-202ENST00000463503 ZNF644Q9H582 1327 aaPredicted RBP18.12■□□□□ 0.49
SSR3-202ENST00000463503 CEP152O94986 1710 aa18.1■□□□□ 0.49
SSR3-202ENST00000463503 CCDC141Q6ZP82 1450 aa18.1■□□□□ 0.49
SSR3-202ENST00000463503 MIA2Q96PC5 1412 aa18.1■□□□□ 0.49
SSR3-202ENST00000463503 CFAP65Q6ZU64 1925 aaKnown RBP18.1■□□□□ 0.49
SSR3-202ENST00000463503 MROH1Q8NDA8 1641 aa18.09■□□□□ 0.49
SSR3-202ENST00000463503 SETD1AO15047 1707 aaKnown RBP18.09■□□□□ 0.49
SSR3-202ENST00000463503 ABCC3O15438 1527 aa18.08■□□□□ 0.49
SSR3-202ENST00000463503 ANKLE2Q86XL3 938 aa18.08■□□□□ 0.48
SSR3-202ENST00000463503 CAMSAP2Q08AD1 1489 aa18.07■□□□□ 0.48
SSR3-202ENST00000463503 RGS17Q9UGC6 210 aaPredicted RBP18.07■□□□□ 0.48
SSR3-202ENST00000463503 EIF2AK4Q9P2K8 1649 aaKnown RBP18.07■□□□□ 0.48
SSR3-202ENST00000463503 ARHGEF5Q12774 1597 aa18.07■□□□□ 0.48
SSR3-202ENST00000463503 MTUS2Q5JR59 1369 aa18.06■□□□□ 0.48
SSR3-202ENST00000463503 CEP162Q5TB80 1403 aa18.05■□□□□ 0.48
SSR3-202ENST00000463503 ERVK-7P63135 1459 aa18.04■□□□□ 0.48
SSR3-202ENST00000463503 KIF3BO15066 747 aa18.04■□□□□ 0.48
SSR3-202ENST00000463503 THEMISQ8N1K5 641 aaPredicted RBP18.04■□□□□ 0.48
SSR3-202ENST00000463503 MAST1Q9Y2H9 1570 aa18.02■□□□□ 0.48
SSR3-202ENST00000463503 NCOA2Q15596 1464 aa18.01■□□□□ 0.47
SSR3-202ENST00000463503 WASHC2CQ9Y4E1 1318 aa18■□□□□ 0.47
SSR3-202ENST00000463503 ROBO1Q9Y6N7 1651 aa18■□□□□ 0.47
SSR3-202ENST00000463503 SLIT1O75093 1534 aa18■□□□□ 0.47
SSR3-202ENST00000463503 SENP3Q9H4L4 574 aaPredicted RBP18■□□□□ 0.47
SSR3-202ENST00000463503 ARHGAP23Q9P227 1491 aa18■□□□□ 0.47
SSR3-202ENST00000463503 SCAF11Q99590 1463 aaKnown RBP17.99■□□□□ 0.47
SSR3-202ENST00000463503 PIK3C2BO00750 1634 aa17.96■□□□□ 0.47
SSR3-202ENST00000463503 KDM5AP29375 1690 aaKnown RBP17.96■□□□□ 0.47
SSR3-202ENST00000463503 MAP3K1Q13233 1512 aa17.95■□□□□ 0.46
SSR3-202ENST00000463503 PRDM15P57071 1507 aaPredicted RBP17.93■□□□□ 0.46
SSR3-202ENST00000463503 FAM135BQ49AJ0 1406 aa17.92■□□□□ 0.46
SSR3-202ENST00000463503 POTEAQ6S8J7 498 aa17.91■□□□□ 0.46
SSR3-202ENST00000463503 CROCC2H7BZ55 1655 aa17.9■□□□□ 0.46
SSR3-202ENST00000463503 PHLPP1O60346 1717 aa17.9■□□□□ 0.46
SSR3-202ENST00000463503 NWD1Q149M9 1564 aa17.9■□□□□ 0.46
SSR3-202ENST00000463503 LTKP29376 864 aa17.87■□□□□ 0.45
SSR3-202ENST00000463503 TET3O43151 1660 aa17.87■□□□□ 0.45
SSR3-202ENST00000463503 RSPH4AQ5TD94 716 aa17.86■□□□□ 0.45
SSR3-202ENST00000463503 COL16A1Q07092 1604 aaPredicted RBP17.85■□□□□ 0.45
SSR3-202ENST00000463503 LRRC9Q6ZRR7 1453 aa17.85■□□□□ 0.45
SSR3-202ENST00000463503 DUOX2Q9NRD8 1548 aa17.84■□□□□ 0.45
SSR3-202ENST00000463503 ARHGAP31Q2M1Z3 1444 aa17.84■□□□□ 0.45
SSR3-202ENST00000463503 MYO5BQ9ULV0 1848 aa17.82■□□□□ 0.44
SSR3-202ENST00000463503 EFCAB6Q5THR3 1501 aa17.82■□□□□ 0.44
SSR3-202ENST00000463503 NKTRP30414 1462 aaKnown RBP17.82■□□□□ 0.44
SSR3-202ENST00000463503 TMEM94Q12767 1356 aa17.81■□□□□ 0.44
SSR3-202ENST00000463503 SRCAPQ6ZRS2 3230 aa17.81■□□□□ 0.44
SSR3-202ENST00000463503 CHD2O14647 1828 aaKnown RBP17.81■□□□□ 0.44
SSR3-202ENST00000463503 TMEM2Q9UHN6 1383 aa17.79■□□□□ 0.44
SSR3-202ENST00000463503 SHPRHQ149N8 1683 aa17.78■□□□□ 0.44
SSR3-202ENST00000463503 TXNDC2Q86VQ3 553 aa17.78■□□□□ 0.44
SSR3-202ENST00000463503 ADGRB3O60242 1522 aa17.77■□□□□ 0.44
SSR3-202ENST00000463503 LRP6O75581 1613 aa17.77■□□□□ 0.44
SSR3-202ENST00000463503 TSPY4P0CV99 314 aa17.77■□□□□ 0.44
SSR3-202ENST00000463503 TSPY10P0CW01 314 aa17.77■□□□□ 0.44
SSR3-202ENST00000463503 ERBINQ96RT1 1412 aa17.74■□□□□ 0.43
SSR3-202ENST00000463503 LMTK2Q8IWU2 1503 aa17.74■□□□□ 0.43
SSR3-202ENST00000463503 GCC2Q8IWJ2 1684 aa17.73■□□□□ 0.43
SSR3-202ENST00000463503 JCADQ9P266 1359 aa17.71■□□□□ 0.43
SSR3-202ENST00000463503 KCNA6P17658 529 aa17.71■□□□□ 0.43
SSR3-202ENST00000463503 EID1Q9Y6B2 187 aa17.71■□□□□ 0.43
SSR3-202ENST00000463503 AHDC1Q5TGY3 1603 aaPredicted RBP17.71■□□□□ 0.43
SSR3-202ENST00000463503 RBM33Q96EV2 1170 aaKnown RBP17.7■□□□□ 0.42
SSR3-202ENST00000463503 MYOM3Q5VTT5 1437 aa17.7■□□□□ 0.42
SSR3-202ENST00000463503 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.69■□□□□ 0.42
SSR3-202ENST00000463503 KIF15Q9NS87 1388 aa17.69■□□□□ 0.42
SSR3-202ENST00000463503 DIP2AQ14689 1571 aa17.68■□□□□ 0.42
SSR3-202ENST00000463503 MSH6P52701 1360 aa17.67■□□□□ 0.42
SSR3-202ENST00000463503 NOS1P29475 1434 aa17.67■□□□□ 0.42
SSR3-202ENST00000463503 PTPN23Q9H3S7 1636 aa17.67■□□□□ 0.42
SSR3-202ENST00000463503 FGD6Q6ZV73 1430 aa17.66■□□□□ 0.42
SSR3-202ENST00000463503 SLC26A8Q96RN1 970 aa17.66■□□□□ 0.42
SSR3-202ENST00000463503 LOC105371045A0A1W2PR82 267 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms