RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 ARID4BQ4LE39 1312 aaPredicted RBP10.82□□□□□ -0.68
EPHA4-210ENST00000463446 WASHC2CQ9Y4E1 1318 aa10.82□□□□□ -0.68
EPHA4-210ENST00000463446 KDM6BO15054 1643 aa10.81□□□□□ -0.68
EPHA4-210ENST00000463446 NUP155O75694 1391 aa10.81□□□□□ -0.68
EPHA4-210ENST00000463446 ZFYVE16Q7Z3T8 1539 aa10.8□□□□□ -0.68
EPHA4-210ENST00000463446 GGT6Q6P531 493 aa10.8□□□□□ -0.68
EPHA4-210ENST00000463446 MPHOSPH9Q99550 1183 aa10.8□□□□□ -0.68
EPHA4-210ENST00000463446 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.8□□□□□ -0.68
EPHA4-210ENST00000463446 TIMELESSQ9UNS1 1208 aa10.8□□□□□ -0.68
EPHA4-210ENST00000463446 RICTORQ6R327 1708 aa10.79□□□□□ -0.68
EPHA4-210ENST00000463446 INO80Q9ULG1 1556 aaPredicted RBP10.78□□□□□ -0.68
EPHA4-210ENST00000463446 COL17A1Q9UMD9 1497 aaPredicted RBP10.78□□□□□ -0.68
EPHA4-210ENST00000463446 REREQ9P2R6 1566 aa10.77□□□□□ -0.68
EPHA4-210ENST00000463446 AGLP35573 1532 aa10.77□□□□□ -0.69
EPHA4-210ENST00000463446 KIDINS220Q9ULH0 1771 aa10.77□□□□□ -0.69
EPHA4-210ENST00000463446 EIF2AK4Q9P2K8 1649 aaKnown RBP10.76□□□□□ -0.69
EPHA4-210ENST00000463446 GCC2Q8IWJ2 1684 aa10.76□□□□□ -0.69
EPHA4-210ENST00000463446 FAM135AQ9P2D6 1515 aa10.75□□□□□ -0.69
EPHA4-210ENST00000463446 STAC3Q96MF2 364 aa10.75□□□□□ -0.69
EPHA4-210ENST00000463446 CNTLNQ9NXG0 1405 aa10.74□□□□□ -0.69
EPHA4-210ENST00000463446 PKD2Q13563 968 aa10.73□□□□□ -0.69
EPHA4-210ENST00000463446 YEATS2Q9ULM3 1422 aa10.73□□□□□ -0.69
EPHA4-210ENST00000463446 HDGFP51858 240 aaKnown RBP10.72□□□□□ -0.69
EPHA4-210ENST00000463446 SLC52A1Q9NWF4 448 aa10.72□□□□□ -0.69
EPHA4-210ENST00000463446 DIP2CQ9Y2E4 1556 aa10.72□□□□□ -0.69
EPHA4-210ENST00000463446 FRMPD1Q5SYB0 1578 aa10.71□□□□□ -0.69
EPHA4-210ENST00000463446 ARHGEF40Q8TER5 1519 aa10.7□□□□□ -0.7
EPHA4-210ENST00000463446 RPRD2Q5VT52 1461 aaKnown RBP10.7□□□□□ -0.7
EPHA4-210ENST00000463446 BCORL1Q5H9F3 1711 aa10.7□□□□□ -0.7
EPHA4-210ENST00000463446 DHX57Q6P158 1386 aaKnown RBP10.69□□□□□ -0.7
EPHA4-210ENST00000463446 MLECQ14165 292 aa10.69□□□□□ -0.7
EPHA4-210ENST00000463446 KDM5DQ9BY66 1539 aa10.68□□□□□ -0.7
EPHA4-210ENST00000463446 ARHGAP31Q2M1Z3 1444 aa10.68□□□□□ -0.7
EPHA4-210ENST00000463446 ABCA6Q8N139 1617 aa10.68□□□□□ -0.7
EPHA4-210ENST00000463446 LMTK2Q8IWU2 1503 aa10.67□□□□□ -0.7
EPHA4-210ENST00000463446 ZMYM3Q14202 1370 aa10.66□□□□□ -0.7
EPHA4-210ENST00000463446 UNC13BO14795 1591 aa10.66□□□□□ -0.7
EPHA4-210ENST00000463446 RNF17Q9BXT8 1623 aaKnown RBP10.66□□□□□ -0.7
EPHA4-210ENST00000463446 PRDM15P57071 1507 aaPredicted RBP10.65□□□□□ -0.7
EPHA4-210ENST00000463446 DEPDC5O75140 1603 aa10.65□□□□□ -0.7
EPHA4-210ENST00000463446 STAG3Q9UJ98 1225 aa10.64□□□□□ -0.71
EPHA4-210ENST00000463446 IQGAP3Q86VI3 1631 aa10.64□□□□□ -0.71
EPHA4-210ENST00000463446 ANKRD30BQ9BXX2 1392 aa10.64□□□□□ -0.71
EPHA4-210ENST00000463446 ZC3H13Q5T200 1668 aaKnown RBP10.63□□□□□ -0.71
EPHA4-210ENST00000463446 RPGRIP1LQ68CZ1 1315 aa10.63□□□□□ -0.71
EPHA4-210ENST00000463446 NEUROD1Q13562 356 aa10.63□□□□□ -0.71
EPHA4-210ENST00000463446 CCDC144AA2RUR9 1427 aa10.63□□□□□ -0.71
EPHA4-210ENST00000463446 PZPP20742 1482 aa10.62□□□□□ -0.71
EPHA4-210ENST00000463446 VWDEQ8N2E2 1590 aa10.62□□□□□ -0.71
EPHA4-210ENST00000463446 TONSLQ96HA7 1378 aa10.62□□□□□ -0.71
EPHA4-210ENST00000463446 PTPRTO14522 1441 aa10.61□□□□□ -0.71
EPHA4-210ENST00000463446 TET3O43151 1660 aa10.61□□□□□ -0.71
EPHA4-210ENST00000463446 VGFO15240 615 aaPredicted RBP10.6□□□□□ -0.71
EPHA4-210ENST00000463446 THEMISQ8N1K5 641 aaPredicted RBP10.6□□□□□ -0.71
EPHA4-210ENST00000463446 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.6□□□□□ -0.71
EPHA4-210ENST00000463446 NPATQ14207 1427 aa10.59□□□□□ -0.71
EPHA4-210ENST00000463446 ABCC3O15438 1527 aa10.59□□□□□ -0.71
EPHA4-210ENST00000463446 SLC24A1O60721 1099 aa10.57□□□□□ -0.72
EPHA4-210ENST00000463446 CHGAP10645 457 aaKnown RBP10.57□□□□□ -0.72
EPHA4-210ENST00000463446 IDI1Q13907 227 aa10.57□□□□□ -0.72
EPHA4-210ENST00000463446 ZNF326Q5BKZ1 582 aaKnown RBP10.57□□□□□ -0.72
EPHA4-210ENST00000463446 EFCAB6Q5THR3 1501 aa10.57□□□□□ -0.72
EPHA4-210ENST00000463446 SIN3AQ96ST3 1273 aa10.56□□□□□ -0.72
EPHA4-210ENST00000463446 EID1Q9Y6B2 187 aa10.56□□□□□ -0.72
EPHA4-210ENST00000463446 NOS1P29475 1434 aa10.56□□□□□ -0.72
EPHA4-210ENST00000463446 MROH2AA6NES4 1674 aa10.56□□□□□ -0.72
EPHA4-210ENST00000463446 TNRQ92752 1358 aa10.55□□□□□ -0.72
EPHA4-210ENST00000463446 PPP1R15AO75807 674 aaPredicted RBP10.55□□□□□ -0.72
EPHA4-210ENST00000463446 FBXO31Q5XUX0 539 aaPredicted RBP10.55□□□□□ -0.72
EPHA4-210ENST00000463446 NLRP1Q9C000 1473 aa10.55□□□□□ -0.72
EPHA4-210ENST00000463446 MROH1Q8NDA8 1641 aa10.55□□□□□ -0.72
EPHA4-210ENST00000463446 RGL3Q3MIN7 710 aa10.54□□□□□ -0.72
EPHA4-210ENST00000463446 DCAF11Q8TEB1 546 aa10.54□□□□□ -0.72
EPHA4-210ENST00000463446 NEURL4Q96JN8 1562 aa10.53□□□□□ -0.72
EPHA4-210ENST00000463446 L3MBTL2Q969R5 705 aa10.53□□□□□ -0.72
EPHA4-210ENST00000463446 CAMSAP1Q5T5Y3 1602 aa10.53□□□□□ -0.72
EPHA4-210ENST00000463446 SETD1BQ9UPS6 1966 aaKnown RBP10.53□□□□□ -0.72
EPHA4-210ENST00000463446 TRPM2O94759 1503 aa10.53□□□□□ -0.72
EPHA4-210ENST00000463446 CEBPAP49715 358 aaPredicted RBP10.52□□□□□ -0.73
EPHA4-210ENST00000463446 E9PCH4 1651 aa10.52□□□□□ -0.73
EPHA4-210ENST00000463446 CLTCQ00610 1675 aaKnown RBP10.51□□□□□ -0.73
EPHA4-210ENST00000463446 ERVK-7P63135 1459 aa10.51□□□□□ -0.73
EPHA4-210ENST00000463446 PLA2R1Q13018 1463 aa10.5□□□□□ -0.73
EPHA4-210ENST00000463446 ANKLE2Q86XL3 938 aa10.5□□□□□ -0.73
EPHA4-210ENST00000463446 KDM2AQ9Y2K7 1162 aa10.5□□□□□ -0.73
EPHA4-210ENST00000463446 SPATA31D1Q6ZQQ2 1576 aa10.5□□□□□ -0.73
EPHA4-210ENST00000463446 ADAMTSL3P82987 1691 aa10.5□□□□□ -0.73
EPHA4-210ENST00000463446 CEP152O94986 1710 aa10.5□□□□□ -0.73
EPHA4-210ENST00000463446 FER1L4A9Z1Z3 1794 aa10.49□□□□□ -0.73
EPHA4-210ENST00000463446 SPHKAPQ2M3C7 1700 aa10.49□□□□□ -0.73
EPHA4-210ENST00000463446 PTPRMP28827 1452 aa10.49□□□□□ -0.73
EPHA4-210ENST00000463446 ZFYVE9O95405 1425 aa10.48□□□□□ -0.73
EPHA4-210ENST00000463446 BCANQ96GW7 911 aa10.47□□□□□ -0.73
EPHA4-210ENST00000463446 DMRT2Q9Y5R5 561 aa10.47□□□□□ -0.73
EPHA4-210ENST00000463446 UHRF1BP1Q6BDS2 1440 aa10.47□□□□□ -0.73
EPHA4-210ENST00000463446 KIF1BO60333 1816 aa10.47□□□□□ -0.73
EPHA4-210ENST00000463446 KDM4FA0A1W2PPD8 638 aa10.46□□□□□ -0.73
EPHA4-210ENST00000463446 TXNDC2Q86VQ3 553 aa10.46□□□□□ -0.73
EPHA4-210ENST00000463446 SPATA31E1Q6ZUB1 1445 aa10.46□□□□□ -0.74
EPHA4-210ENST00000463446 PREX1Q8TCU6 1659 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms