RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 CAMSAP1Q5T5Y3 1602 aa34.72■■■■□ 3.15
PDLIM7-206ENST00000463411 CEP170BQ9Y4F5 1589 aaPredicted RBP34.71■■■■□ 3.15
PDLIM7-206ENST00000463411 PTPRTO14522 1441 aa34.71■■■■□ 3.15
PDLIM7-206ENST00000463411 PTPN23Q9H3S7 1636 aa34.7■■■■□ 3.15
PDLIM7-206ENST00000463411 EIF2AK4Q9P2K8 1649 aaKnown RBP34.7■■■■□ 3.14
PDLIM7-206ENST00000463411 CROCC2H7BZ55 1655 aa34.68■■■■□ 3.14
PDLIM7-206ENST00000463411 RNF17Q9BXT8 1623 aaKnown RBP34.67■■■■□ 3.14
PDLIM7-206ENST00000463411 WASHC2CQ9Y4E1 1318 aa34.66■■■■□ 3.14
PDLIM7-206ENST00000463411 CERKQ8TCT0 537 aa34.66■■■■□ 3.14
PDLIM7-206ENST00000463411 PZPP20742 1482 aa34.64■■■■□ 3.14
PDLIM7-206ENST00000463411 SHANK2Q9UPX8 1470 aa34.63■■■■□ 3.13
PDLIM7-206ENST00000463411 ZC3H13Q5T200 1668 aaKnown RBP34.63■■■■□ 3.13
PDLIM7-206ENST00000463411 DUOX2Q9NRD8 1548 aa34.6■■■■□ 3.13
PDLIM7-206ENST00000463411 PLA2R1Q13018 1463 aa34.6■■■■□ 3.13
PDLIM7-206ENST00000463411 FGD6Q6ZV73 1430 aa34.6■■■■□ 3.13
PDLIM7-206ENST00000463411 A2ML1A8K2U0 1454 aa34.58■■■■□ 3.13
PDLIM7-206ENST00000463411 DNMT1P26358 1616 aaKnown RBP34.58■■■■□ 3.13
PDLIM7-206ENST00000463411 TNRQ92752 1358 aa34.57■■■■□ 3.12
PDLIM7-206ENST00000463411 TCOF1Q13428 1488 aaKnown RBP34.57■■■■□ 3.12
PDLIM7-206ENST00000463411 ABCC5O15440 1437 aa34.55■■■■□ 3.12
PDLIM7-206ENST00000463411 DAPK1P53355 1430 aa34.54■■■■□ 3.12
PDLIM7-206ENST00000463411 ABCC3O15438 1527 aa34.53■■■■□ 3.12
PDLIM7-206ENST00000463411 KIF15Q9NS87 1388 aa34.52■■■■□ 3.12
PDLIM7-206ENST00000463411 PKD2Q13563 968 aa34.51■■■■□ 3.12
PDLIM7-206ENST00000463411 FBXO31Q5XUX0 539 aaPredicted RBP34.51■■■■□ 3.12
PDLIM7-206ENST00000463411 MROH1Q8NDA8 1641 aa34.51■■■■□ 3.11
PDLIM7-206ENST00000463411 NCKAP5LQ9HCH0 1330 aa34.5■■■■□ 3.11
PDLIM7-206ENST00000463411 ERBINQ96RT1 1412 aa34.49■■■■□ 3.11
PDLIM7-206ENST00000463411 CEP152O94986 1710 aa34.48■■■■□ 3.11
PDLIM7-206ENST00000463411 NLRP1Q9C000 1473 aa34.46■■■■□ 3.11
PDLIM7-206ENST00000463411 POLR1AO95602 1720 aaPredicted RBP34.44■■■■□ 3.1
PDLIM7-206ENST00000463411 LTBP4Q8N2S1 1624 aa34.44■■■■□ 3.1
PDLIM7-206ENST00000463411 PRDM15P57071 1507 aaPredicted RBP34.43■■■■□ 3.1
PDLIM7-206ENST00000463411 RRP7BPQ9NSQ0 103 aa34.42■■■■□ 3.1
PDLIM7-206ENST00000463411 SPATA31D1Q6ZQQ2 1576 aa34.4■■■■□ 3.1
PDLIM7-206ENST00000463411 ANKRD30AQ9BXX3 1397 aa34.4■■■■□ 3.1
PDLIM7-206ENST00000463411 UGGT1Q9NYU2 1555 aa34.38■■■■□ 3.09
PDLIM7-206ENST00000463411 DEPDC5O75140 1603 aa34.37■■■■□ 3.09
PDLIM7-206ENST00000463411 ERVK-7P63135 1459 aa34.36■■■■□ 3.09
PDLIM7-206ENST00000463411 IQSEC2Q5JU85 1478 aa34.35■■■■□ 3.09
PDLIM7-206ENST00000463411 CHIC2Q9UKJ5 165 aa34.33■■■■□ 3.09
PDLIM7-206ENST00000463411 FAM50AQ14320 339 aaKnown RBP34.32■■■■□ 3.08
PDLIM7-206ENST00000463411 THEMISQ8N1K5 641 aaPredicted RBP34.32■■■■□ 3.08
PDLIM7-206ENST00000463411 KANK1Q14678 1352 aa34.31■■■■□ 3.08
PDLIM7-206ENST00000463411 NEURL4Q96JN8 1562 aa34.3■■■■□ 3.08
PDLIM7-206ENST00000463411 ZNF335Q9H4Z2 1342 aaPredicted RBP34.3■■■■□ 3.08
PDLIM7-206ENST00000463411 ADGRL2O95490 1459 aa34.29■■■■□ 3.08
PDLIM7-206ENST00000463411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.29■■■■□ 3.082e-6■■■■□ 23.1
PDLIM7-206ENST00000463411 CFAP65Q6ZU64 1925 aaKnown RBP34.29■■■■□ 3.08
PDLIM7-206ENST00000463411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.27■■■■□ 3.08
PDLIM7-206ENST00000463411 ARHGAP31Q2M1Z3 1444 aa34.27■■■■□ 3.08
PDLIM7-206ENST00000463411 ANKLE2Q86XL3 938 aa34.26■■■■□ 3.08
PDLIM7-206ENST00000463411 UBR1Q8IWV7 1749 aa34.2■■■■□ 3.07
PDLIM7-206ENST00000463411 LMTK2Q8IWU2 1503 aa34.19■■■■□ 3.06
PDLIM7-206ENST00000463411 VWDEQ8N2E2 1590 aa34.19■■■■□ 3.06
PDLIM7-206ENST00000463411 MED14O60244 1454 aa34.17■■■■□ 3.06
PDLIM7-206ENST00000463411 IQGAP1P46940 1657 aa34.16■■■■□ 3.06
PDLIM7-206ENST00000463411 NPHP4O75161 1426 aaPredicted RBP34.16■■■■□ 3.06
PDLIM7-206ENST00000463411 ANKRD50Q9ULJ7 1429 aa34.13■■■■□ 3.05
PDLIM7-206ENST00000463411 CPS1P31327 1500 aa34.12■■■■□ 3.05
PDLIM7-206ENST00000463411 EFCAB6Q5THR3 1501 aa34.11■■■■□ 3.05
PDLIM7-206ENST00000463411 PIK3C2BO00750 1634 aa34.08■■■■□ 3.05
PDLIM7-206ENST00000463411 SCAF11Q99590 1463 aaKnown RBP34.05■■■■□ 3.04
PDLIM7-206ENST00000463411 SLIT1O75093 1534 aa34.04■■■■□ 3.04
PDLIM7-206ENST00000463411 KDM5AP29375 1690 aaKnown RBP34.03■■■■□ 3.04
PDLIM7-206ENST00000463411 UBAP1LF5GYI3 381 aa34.02■■■■□ 3.04
PDLIM7-206ENST00000463411 ARHGAP23Q9P227 1491 aa34.01■■■■□ 3.04
PDLIM7-206ENST00000463411 ROCK1Q13464 1354 aa34.01■■■■□ 3.04
PDLIM7-206ENST00000463411 UNC13BO14795 1591 aa34.01■■■■□ 3.03
PDLIM7-206ENST00000463411 SYNMO15061 1565 aa34.01■■■■□ 3.03
PDLIM7-206ENST00000463411 TET3O43151 1660 aa34■■■■□ 3.03
PDLIM7-206ENST00000463411 STAG3Q9UJ98 1225 aa34■■■■□ 3.03
PDLIM7-206ENST00000463411 RPRD2Q5VT52 1461 aaKnown RBP33.99■■■■□ 3.03
PDLIM7-206ENST00000463411 NOS1P29475 1434 aa33.97■■■■□ 3.03
PDLIM7-206ENST00000463411 GCC2Q8IWJ2 1684 aa33.97■■■■□ 3.03
PDLIM7-206ENST00000463411 PPARGC1BQ86YN6 1023 aaKnown RBP33.97■■■■□ 3.03
PDLIM7-206ENST00000463411 EID1Q9Y6B2 187 aa33.96■■■■□ 3.03
PDLIM7-206ENST00000463411 TXNDC2Q86VQ3 553 aa33.94■■■■□ 3.02
PDLIM7-206ENST00000463411 ADGRB3O60242 1522 aa33.93■■■■□ 3.02
PDLIM7-206ENST00000463411 TMEM2Q9UHN6 1383 aa33.92■■■■□ 3.02
PDLIM7-206ENST00000463411 ITGAEP38570 1179 aa33.91■■■■□ 3.02
PDLIM7-206ENST00000463411 IDI1Q13907 227 aa33.9■■■■□ 3.02
PDLIM7-206ENST00000463411 LTKP29376 864 aa33.89■■■■□ 3.02
PDLIM7-206ENST00000463411 STRCP1A6NGW2 1772 aa33.89■■■■□ 3.02
PDLIM7-206ENST00000463411 IQGAP3Q86VI3 1631 aa33.87■■■■□ 3.01
PDLIM7-206ENST00000463411 SLC52A1Q9NWF4 448 aa33.87■■■■□ 3.01
PDLIM7-206ENST00000463411 TOM1O60784 492 aa33.84■■■■□ 3.01
PDLIM7-206ENST00000463411 E9PCH4 1651 aa33.82■■■■□ 3
PDLIM7-206ENST00000463411 SCAF1Q9H7N4 1312 aaKnown RBP33.8■■■■□ 3
PDLIM7-206ENST00000463411 LRRC7Q96NW7 1537 aa33.8■■■■□ 3
PDLIM7-206ENST00000463411 RRBP1Q9P2E9 1410 aaKnown RBP33.77■■■■□ 3
PDLIM7-206ENST00000463411 PIP4K2BP78356 416 aa33.76■■■□□ 2.99
PDLIM7-206ENST00000463411 MYO5BQ9ULV0 1848 aa33.76■■■□□ 2.99
PDLIM7-206ENST00000463411 NUP155O75694 1391 aa33.75■■■□□ 2.99
PDLIM7-206ENST00000463411 DISP3Q9P2K9 1392 aa33.75■■■□□ 2.99
PDLIM7-206ENST00000463411 TMEM131LA2VDJ0 1609 aa33.72■■■□□ 2.99
PDLIM7-206ENST00000463411 ALKQ9UM73 1620 aa33.67■■■□□ 2.98
PDLIM7-206ENST00000463411 ZFYVE9O95405 1425 aa33.66■■■□□ 2.98
PDLIM7-206ENST00000463411 HDGFP51858 240 aaKnown RBP33.66■■■□□ 2.98
PDLIM7-206ENST00000463411 BCANQ96GW7 911 aa33.65■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms