RNA–Protein interactions for RNA: ENST00000463238.1

FAM53A-203, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-203ENST00000463238 KIF3BO15066 747 aa23.91■■□□□ 1.42
FAM53A-203ENST00000463238 NCOA2Q15596 1464 aa23.9■■□□□ 1.42
FAM53A-203ENST00000463238 UBAP1LF5GYI3 381 aa23.9■■□□□ 1.42
FAM53A-203ENST00000463238 CAMSAP2Q08AD1 1489 aa23.89■■□□□ 1.42
FAM53A-203ENST00000463238 TNRQ92752 1358 aa23.89■■□□□ 1.41
FAM53A-203ENST00000463238 KDM5DQ9BY66 1539 aa23.89■■□□□ 1.41
FAM53A-203ENST00000463238 DNMT1P26358 1616 aaKnown RBP23.88■■□□□ 1.41
FAM53A-203ENST00000463238 PZPP20742 1482 aa23.87■■□□□ 1.41
FAM53A-203ENST00000463238 WASHC2CQ9Y4E1 1318 aa23.86■■□□□ 1.41
FAM53A-203ENST00000463238 TSPY4P0CV99 314 aa23.85■■□□□ 1.41
FAM53A-203ENST00000463238 TSPY10P0CW01 314 aa23.85■■□□□ 1.41
FAM53A-203ENST00000463238 FBXO31Q5XUX0 539 aaPredicted RBP23.82■■□□□ 1.4
FAM53A-203ENST00000463238 ARHGEF5Q12774 1597 aa23.82■■□□□ 1.4
FAM53A-203ENST00000463238 ANKLE2Q86XL3 938 aa23.79■■□□□ 1.4
FAM53A-203ENST00000463238 THEMISQ8N1K5 641 aaPredicted RBP23.79■■□□□ 1.4
FAM53A-203ENST00000463238 NLRP1Q9C000 1473 aa23.79■■□□□ 1.4
FAM53A-203ENST00000463238 CPS1P31327 1500 aa23.79■■□□□ 1.4
FAM53A-203ENST00000463238 POLR1AO95602 1720 aaPredicted RBP23.79■■□□□ 1.4
FAM53A-203ENST00000463238 MIA2Q96PC5 1412 aa23.78■■□□□ 1.4
FAM53A-203ENST00000463238 NEURL4Q96JN8 1562 aa23.75■■□□□ 1.39
FAM53A-203ENST00000463238 SHANK2Q9UPX8 1470 aa23.75■■□□□ 1.39
FAM53A-203ENST00000463238 TOM1O60784 492 aa23.74■■□□□ 1.39
FAM53A-203ENST00000463238 LRRC9Q6ZRR7 1453 aa23.74■■□□□ 1.39
FAM53A-203ENST00000463238 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.73■■□□□ 1.39
FAM53A-203ENST00000463238 VPS8Q8N3P4 1428 aa23.73■■□□□ 1.39
FAM53A-203ENST00000463238 UGGT1Q9NYU2 1555 aa23.73■■□□□ 1.39
FAM53A-203ENST00000463238 MAST1Q9Y2H9 1570 aa23.7■■□□□ 1.38
FAM53A-203ENST00000463238 SCAF1Q9H7N4 1312 aaKnown RBP23.7■■□□□ 1.38
FAM53A-203ENST00000463238 RNF17Q9BXT8 1623 aaKnown RBP23.7■■□□□ 1.38
FAM53A-203ENST00000463238 MED14O60244 1454 aa23.69■■□□□ 1.38
FAM53A-203ENST00000463238 ZC3H13Q5T200 1668 aaKnown RBP23.69■■□□□ 1.38
FAM53A-203ENST00000463238 DEPDC5O75140 1603 aa23.69■■□□□ 1.38
FAM53A-203ENST00000463238 NPHP4O75161 1426 aaPredicted RBP23.68■■□□□ 1.38
FAM53A-203ENST00000463238 PIP4K2BP78356 416 aa23.67■■□□□ 1.38
FAM53A-203ENST00000463238 ABCC3O15438 1527 aa23.67■■□□□ 1.38
FAM53A-203ENST00000463238 EIF2AK4Q9P2K8 1649 aaKnown RBP23.66■■□□□ 1.38
FAM53A-203ENST00000463238 MAP3K1Q13233 1512 aa23.66■■□□□ 1.38
FAM53A-203ENST00000463238 VWDEQ8N2E2 1590 aa23.65■■□□□ 1.38
FAM53A-203ENST00000463238 HSPA1LP34931 641 aa23.63■■□□□ 1.37
FAM53A-203ENST00000463238 MYOM3Q5VTT5 1437 aa23.63■■□□□ 1.37
FAM53A-203ENST00000463238 ERVK-7P63135 1459 aa23.62■■□□□ 1.37
FAM53A-203ENST00000463238 IQGAP1P46940 1657 aa23.6■■□□□ 1.37
FAM53A-203ENST00000463238 DUOX2Q9NRD8 1548 aa23.59■■□□□ 1.37
FAM53A-203ENST00000463238 KANK4Q5T7N3 995 aaPredicted RBP23.58■■□□□ 1.37
FAM53A-203ENST00000463238 MROH1Q8NDA8 1641 aa23.56■■□□□ 1.36
FAM53A-203ENST00000463238 LOC105371045A0A1W2PR82 267 aa23.54■■□□□ 1.36
FAM53A-203ENST00000463238 KIF15Q9NS87 1388 aa23.53■■□□□ 1.36
FAM53A-203ENST00000463238 MED1Q15648 1581 aaPredicted RBP23.53■■□□□ 1.36
FAM53A-203ENST00000463238 SYNMO15061 1565 aa23.52■■□□□ 1.36
FAM53A-203ENST00000463238 ARHGAP31Q2M1Z3 1444 aa23.52■■□□□ 1.36
FAM53A-203ENST00000463238 ERBINQ96RT1 1412 aa23.52■■□□□ 1.36
FAM53A-203ENST00000463238 CEP152O94986 1710 aa23.52■■□□□ 1.36
FAM53A-203ENST00000463238 SCAF11Q99590 1463 aaKnown RBP23.51■■□□□ 1.35
FAM53A-203ENST00000463238 PHF23Q9BUL5 403 aaPredicted RBP23.51■■□□□ 1.35
FAM53A-203ENST00000463238 PRDM15P57071 1507 aaPredicted RBP23.5■■□□□ 1.35
FAM53A-203ENST00000463238 LRRC7Q96NW7 1537 aa23.5■■□□□ 1.35
FAM53A-203ENST00000463238 APLP2Q06481 763 aa23.5■■□□□ 1.35
FAM53A-203ENST00000463238 UBR1Q8IWV7 1749 aa23.5■■□□□ 1.35
FAM53A-203ENST00000463238 EID1Q9Y6B2 187 aa23.48■■□□□ 1.35
FAM53A-203ENST00000463238 TXNDC2Q86VQ3 553 aa23.47■■□□□ 1.35
FAM53A-203ENST00000463238 RRP7BPQ9NSQ0 103 aa23.47■■□□□ 1.35
FAM53A-203ENST00000463238 KANK1Q14678 1352 aa23.47■■□□□ 1.35
FAM53A-203ENST00000463238 ABCC5O15440 1437 aa23.47■■□□□ 1.35
FAM53A-203ENST00000463238 SLIT1O75093 1534 aa23.47■■□□□ 1.35
FAM53A-203ENST00000463238 ALKQ9UM73 1620 aa23.47■■□□□ 1.35
FAM53A-203ENST00000463238 ARHGAP23Q9P227 1491 aa23.46■■□□□ 1.35
FAM53A-203ENST00000463238 CROCC2H7BZ55 1655 aa23.44■■□□□ 1.34
FAM53A-203ENST00000463238 STRCP1A6NGW2 1772 aa23.44■■□□□ 1.34
FAM53A-203ENST00000463238 PTPN23Q9H3S7 1636 aa23.44■■□□□ 1.34
FAM53A-203ENST00000463238 CFAP65Q6ZU64 1925 aaKnown RBP23.43■■□□□ 1.34
FAM53A-203ENST00000463238 LTKP29376 864 aa23.43■■□□□ 1.34
FAM53A-203ENST00000463238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.43■■□□□ 1.34
FAM53A-203ENST00000463238 STAG3Q9UJ98 1225 aa23.42■■□□□ 1.34
FAM53A-203ENST00000463238 DAPK1P53355 1430 aa23.42■■□□□ 1.34
FAM53A-203ENST00000463238 ANKRD30AQ9BXX3 1397 aa23.4■■□□□ 1.34
FAM53A-203ENST00000463238 TMEM2Q9UHN6 1383 aa23.4■■□□□ 1.34
FAM53A-203ENST00000463238 FGD6Q6ZV73 1430 aa23.39■■□□□ 1.33
FAM53A-203ENST00000463238 LMTK2Q8IWU2 1503 aa23.37■■□□□ 1.33
FAM53A-203ENST00000463238 PIK3C2BO00750 1634 aa23.36■■□□□ 1.33
FAM53A-203ENST00000463238 KDM5AP29375 1690 aaKnown RBP23.35■■□□□ 1.33
FAM53A-203ENST00000463238 EFCAB6Q5THR3 1501 aa23.34■■□□□ 1.33
FAM53A-203ENST00000463238 SENP3Q9H4L4 574 aaPredicted RBP23.34■■□□□ 1.33
FAM53A-203ENST00000463238 CHIC2Q9UKJ5 165 aa23.32■■□□□ 1.32
FAM53A-203ENST00000463238 IDI1Q13907 227 aa23.31■■□□□ 1.32
FAM53A-203ENST00000463238 KCNA6P17658 529 aa23.28■■□□□ 1.32
FAM53A-203ENST00000463238 SLC52A1Q9NWF4 448 aa23.28■■□□□ 1.32
FAM53A-203ENST00000463238 FAM135BQ49AJ0 1406 aa23.27■■□□□ 1.32
FAM53A-203ENST00000463238 NOS1P29475 1434 aa23.26■■□□□ 1.31
FAM53A-203ENST00000463238 TMEM94Q12767 1356 aa23.26■■□□□ 1.31
FAM53A-203ENST00000463238 ADGRL2O95490 1459 aa23.25■■□□□ 1.31
FAM53A-203ENST00000463238 ADGRB3O60242 1522 aa23.25■■□□□ 1.31
FAM53A-203ENST00000463238 XIRP1Q702N8 1843 aaKnown RBP23.25■■□□□ 1.31
FAM53A-203ENST00000463238 PROSER2Q86WR7 435 aaPredicted RBP23.23■■□□□ 1.31
FAM53A-203ENST00000463238 SLC26A8Q96RN1 970 aa23.23■■□□□ 1.31
FAM53A-203ENST00000463238 RPRD2Q5VT52 1461 aaKnown RBP23.23■■□□□ 1.31
FAM53A-203ENST00000463238 TET3O43151 1660 aa23.22■■□□□ 1.31
FAM53A-203ENST00000463238 BCANQ96GW7 911 aa23.21■■□□□ 1.31
FAM53A-203ENST00000463238 NKTRP30414 1462 aaKnown RBP23.21■■□□□ 1.31
FAM53A-203ENST00000463238 ANKRD50Q9ULJ7 1429 aa23.19■■□□□ 1.3
FAM53A-203ENST00000463238 HDGFP51858 240 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms