RNA–Protein interactions for RNA: ENST00000463197.1

CCR9-205, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 4

Gene CCR9, Length 349 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-205ENST00000463197 MIA2Q96PC5 1412 aa9.03□□□□□ -0.96
CCR9-205ENST00000463197 ADGBQ8N7X0 1667 aa9.03□□□□□ -0.96
CCR9-205ENST00000463197 CEP170BQ9Y4F5 1589 aaPredicted RBP9.03□□□□□ -0.96
CCR9-205ENST00000463197 A2ML1A8K2U0 1454 aa9.02□□□□□ -0.96
CCR9-205ENST00000463197 PLA2R1Q13018 1463 aa9.02□□□□□ -0.96
CCR9-205ENST00000463197 DNMT1P26358 1616 aaKnown RBP9.02□□□□□ -0.96
CCR9-205ENST00000463197 MYO3AQ8NEV4 1616 aa9.02□□□□□ -0.96
CCR9-205ENST00000463197 TNRQ92752 1358 aa9.02□□□□□ -0.97
CCR9-205ENST00000463197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.02□□□□□ -0.97
CCR9-205ENST00000463197 ABCC5O15440 1437 aa9.02□□□□□ -0.97
CCR9-205ENST00000463197 ARHGEF5Q12774 1597 aa9.02□□□□□ -0.97
CCR9-205ENST00000463197 PZPP20742 1482 aa9.02□□□□□ -0.97
CCR9-205ENST00000463197 MAP3K1Q13233 1512 aa9.01□□□□□ -0.97
CCR9-205ENST00000463197 RRP7BPQ9NSQ0 103 aa9.01□□□□□ -0.97
CCR9-205ENST00000463197 MYOM3Q5VTT5 1437 aa9□□□□□ -0.97
CCR9-205ENST00000463197 NEURL4Q96JN8 1562 aa8.99□□□□□ -0.97
CCR9-205ENST00000463197 MROH1Q8NDA8 1641 aa8.99□□□□□ -0.97
CCR9-205ENST00000463197 ZNF142P52746 1687 aaPredicted RBP8.99□□□□□ -0.97
CCR9-205ENST00000463197 KDM5DQ9BY66 1539 aa8.99□□□□□ -0.97
CCR9-205ENST00000463197 UBAP1LF5GYI3 381 aa8.98□□□□□ -0.97
CCR9-205ENST00000463197 LTKP29376 864 aa8.98□□□□□ -0.97
CCR9-205ENST00000463197 ABCC3O15438 1527 aa8.98□□□□□ -0.97
CCR9-205ENST00000463197 MAST1Q9Y2H9 1570 aa8.98□□□□□ -0.97
CCR9-205ENST00000463197 IQSEC2Q5JU85 1478 aa8.97□□□□□ -0.97
CCR9-205ENST00000463197 ANKLE2Q86XL3 938 aa8.97□□□□□ -0.97
CCR9-205ENST00000463197 THEMISQ8N1K5 641 aaPredicted RBP8.97□□□□□ -0.97
CCR9-205ENST00000463197 CHIC2Q9UKJ5 165 aa8.97□□□□□ -0.97
CCR9-205ENST00000463197 DISP3Q9P2K9 1392 aa8.97□□□□□ -0.97
CCR9-205ENST00000463197 ERVK-7P63135 1459 aa8.96□□□□□ -0.98
CCR9-205ENST00000463197 SHANK2Q9UPX8 1470 aa8.96□□□□□ -0.98
CCR9-205ENST00000463197 ALKQ9UM73 1620 aa8.95□□□□□ -0.98
CCR9-205ENST00000463197 HSPA1LP34931 641 aa8.95□□□□□ -0.98
CCR9-205ENST00000463197 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.95□□□□□ -0.98
CCR9-205ENST00000463197 MED14O60244 1454 aa8.95□□□□□ -0.98
CCR9-205ENST00000463197 SPATA31D1Q6ZQQ2 1576 aa8.95□□□□□ -0.98
CCR9-205ENST00000463197 VWDEQ8N2E2 1590 aa8.95□□□□□ -0.98
CCR9-205ENST00000463197 UGGT1Q9NYU2 1555 aa8.95□□□□□ -0.98
CCR9-205ENST00000463197 RNF17Q9BXT8 1623 aaKnown RBP8.94□□□□□ -0.98
CCR9-205ENST00000463197 KIF15Q9NS87 1388 aa8.94□□□□□ -0.98
CCR9-205ENST00000463197 NPHP4O75161 1426 aaPredicted RBP8.94□□□□□ -0.98
CCR9-205ENST00000463197 DAPK1P53355 1430 aa8.94□□□□□ -0.98
CCR9-205ENST00000463197 NLRP1Q9C000 1473 aa8.94□□□□□ -0.98
CCR9-205ENST00000463197 PIP4K2BP78356 416 aa8.93□□□□□ -0.98
CCR9-205ENST00000463197 IDI1Q13907 227 aa8.93□□□□□ -0.98
CCR9-205ENST00000463197 FGD6Q6ZV73 1430 aa8.93□□□□□ -0.98
CCR9-205ENST00000463197 DUOX2Q9NRD8 1548 aa8.93□□□□□ -0.98
CCR9-205ENST00000463197 FAM135AQ9P2D6 1515 aa8.93□□□□□ -0.98
CCR9-205ENST00000463197 ARHGAP31Q2M1Z3 1444 aa8.92□□□□□ -0.98
CCR9-205ENST00000463197 PTPN23Q9H3S7 1636 aa8.91□□□□□ -0.98
CCR9-205ENST00000463197 TXNDC2Q86VQ3 553 aa8.91□□□□□ -0.98
CCR9-205ENST00000463197 ARHGAP23Q9P227 1491 aa8.9□□□□□ -0.98
CCR9-205ENST00000463197 SOCS7O14512 581 aa8.9□□□□□ -0.98
CCR9-205ENST00000463197 STRCP1A6NGW2 1772 aa8.9□□□□□ -0.98
CCR9-205ENST00000463197 EIF2AK4Q9P2K8 1649 aaKnown RBP8.9□□□□□ -0.99
CCR9-205ENST00000463197 LRRC7Q96NW7 1537 aa8.9□□□□□ -0.99
CCR9-205ENST00000463197 ERBINQ96RT1 1412 aa8.89□□□□□ -0.99
CCR9-205ENST00000463197 APLP2Q06481 763 aa8.89□□□□□ -0.99
CCR9-205ENST00000463197 PPARGC1BQ86YN6 1023 aaKnown RBP8.89□□□□□ -0.99
CCR9-205ENST00000463197 RBM33Q96EV2 1170 aaKnown RBP8.89□□□□□ -0.99
CCR9-205ENST00000463197 DEPDC5O75140 1603 aa8.89□□□□□ -0.99
CCR9-205ENST00000463197 PRDM15P57071 1507 aaPredicted RBP8.89□□□□□ -0.99
CCR9-205ENST00000463197 CEP152O94986 1710 aa8.88□□□□□ -0.99
CCR9-205ENST00000463197 TOM1O60784 492 aa8.88□□□□□ -0.99
CCR9-205ENST00000463197 FAM50AQ14320 339 aaKnown RBP8.88□□□□□ -0.99
CCR9-205ENST00000463197 CPS1P31327 1500 aa8.88□□□□□ -0.99
CCR9-205ENST00000463197 NOS1P29475 1434 aa8.88□□□□□ -0.99
CCR9-205ENST00000463197 ANKRD30AQ9BXX3 1397 aa8.87□□□□□ -0.99
CCR9-205ENST00000463197 TMEM2Q9UHN6 1383 aa8.87□□□□□ -0.99
CCR9-205ENST00000463197 SCAF1Q9H7N4 1312 aaKnown RBP8.87□□□□□ -0.99
CCR9-205ENST00000463197 SLIT1O75093 1534 aa8.87□□□□□ -0.99
CCR9-205ENST00000463197 SENP3Q9H4L4 574 aaPredicted RBP8.87□□□□□ -0.99
CCR9-205ENST00000463197 POLR1AO95602 1720 aaPredicted RBP8.87□□□□□ -0.99
CCR9-205ENST00000463197 UBR1Q8IWV7 1749 aa8.87□□□□□ -0.99
CCR9-205ENST00000463197 SCAF11Q99590 1463 aaKnown RBP8.87□□□□□ -0.99
CCR9-205ENST00000463197 LMTK2Q8IWU2 1503 aa8.86□□□□□ -0.99
CCR9-205ENST00000463197 ZC3H13Q5T200 1668 aaKnown RBP8.86□□□□□ -0.99
CCR9-205ENST00000463197 ADGRL2O95490 1459 aa8.86□□□□□ -0.99
CCR9-205ENST00000463197 SLC26A8Q96RN1 970 aa8.86□□□□□ -0.99
CCR9-205ENST00000463197 SYNMO15061 1565 aa8.86□□□□□ -0.99
CCR9-205ENST00000463197 CROCC2H7BZ55 1655 aa8.85□□□□□ -0.99
CCR9-205ENST00000463197 IQGAP1P46940 1657 aa8.85□□□□□ -0.99
CCR9-205ENST00000463197 TET3O43151 1660 aa8.85□□□□□ -0.99
CCR9-205ENST00000463197 PIK3C2BO00750 1634 aa8.84□□□□□ -0.99
CCR9-205ENST00000463197 RGS17Q9UGC6 210 aaPredicted RBP8.84□□□□□ -0.99
CCR9-205ENST00000463197 ANKRD50Q9ULJ7 1429 aa8.83□□□□□ -1
CCR9-205ENST00000463197 CFAP65Q6ZU64 1925 aaKnown RBP8.83□□□□□ -1
CCR9-205ENST00000463197 KCNA6P17658 529 aa8.82□□□□□ -1
CCR9-205ENST00000463197 NUTM2DQ5VT03 806 aaPredicted RBP8.82□□□□□ -1
CCR9-205ENST00000463197 SLC52A1Q9NWF4 448 aa8.82□□□□□ -1
CCR9-205ENST00000463197 EID1Q9Y6B2 187 aa8.82□□□□□ -1
CCR9-205ENST00000463197 KANK1Q14678 1352 aa8.82□□□□□ -1
CCR9-205ENST00000463197 STAG3Q9UJ98 1225 aa8.81□□□□□ -1
CCR9-205ENST00000463197 TMEM94Q12767 1356 aa8.81□□□□□ -1
CCR9-205ENST00000463197 ZFYVE9O95405 1425 aa8.8□□□□□ -1
CCR9-205ENST00000463197 EFCAB6Q5THR3 1501 aa8.8□□□□□ -1
CCR9-205ENST00000463197 ITGAEP38570 1179 aa8.8□□□□□ -1
CCR9-205ENST00000463197 MED1Q15648 1581 aaPredicted RBP8.79□□□□□ -1
CCR9-205ENST00000463197 PROSER2Q86WR7 435 aaPredicted RBP8.79□□□□□ -1
CCR9-205ENST00000463197 XIRP1Q702N8 1843 aaKnown RBP8.79□□□□□ -1
CCR9-205ENST00000463197 ROCK1Q13464 1354 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms