RNA–Protein interactions for RNA: ENST00000463029.5

TMEM254-207, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 847 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-207ENST00000463029 ZMYM3Q14202 1370 aa13.17□□□□□ -0.3
TMEM254-207ENST00000463029 STRCQ7RTU9 1775 aa13.17□□□□□ -0.3
TMEM254-207ENST00000463029 INO80Q9ULG1 1556 aaPredicted RBP13.16□□□□□ -0.3
TMEM254-207ENST00000463029 EHBP1L1Q8N3D4 1523 aa13.16□□□□□ -0.3
TMEM254-207ENST00000463029 SUPT6HQ7KZ85 1726 aaKnown RBP13.16□□□□□ -0.3
TMEM254-207ENST00000463029 TIAM1Q13009 1591 aa13.15□□□□□ -0.3
TMEM254-207ENST00000463029 NPATQ14207 1427 aa13.15□□□□□ -0.3
TMEM254-207ENST00000463029 GGT6Q6P531 493 aa13.15□□□□□ -0.3
TMEM254-207ENST00000463029 PLXNC1O60486 1568 aa13.15□□□□□ -0.3
TMEM254-207ENST00000463029 PTPRTO14522 1441 aa13.14□□□□□ -0.31
TMEM254-207ENST00000463029 NCOA1Q15788 1441 aa13.13□□□□□ -0.31
TMEM254-207ENST00000463029 MROH2AA6NES4 1674 aa13.13□□□□□ -0.31
TMEM254-207ENST00000463029 MBD5Q9P267 1494 aa13.12□□□□□ -0.31
TMEM254-207ENST00000463029 MKRN4PQ13434 485 aaPredicted RBP13.12□□□□□ -0.31
TMEM254-207ENST00000463029 CLTCQ00610 1675 aaKnown RBP13.11□□□□□ -0.31
TMEM254-207ENST00000463029 NCOA2Q15596 1464 aa13.1□□□□□ -0.31
TMEM254-207ENST00000463029 CAMSAP1Q5T5Y3 1602 aa13.1□□□□□ -0.31
TMEM254-207ENST00000463029 ADGBQ8N7X0 1667 aa13.09□□□□□ -0.31
TMEM254-207ENST00000463029 RTEL1-TNFRSF6BF6WH68 1400 aa13.09□□□□□ -0.31
TMEM254-207ENST00000463029 PTPRKQ15262 1439 aa13.09□□□□□ -0.31
TMEM254-207ENST00000463029 ZBTB12Q9Y330 459 aaPredicted RBP13.09□□□□□ -0.31
TMEM254-207ENST00000463029 CCDC141Q6ZP82 1450 aa13.08□□□□□ -0.32
TMEM254-207ENST00000463029 NCKAP5LQ9HCH0 1330 aa13.08□□□□□ -0.32
TMEM254-207ENST00000463029 DHX29Q7Z478 1369 aaKnown RBP13.07□□□□□ -0.32
TMEM254-207ENST00000463029 CAMSAP2Q08AD1 1489 aa13.07□□□□□ -0.32
TMEM254-207ENST00000463029 MYO3AQ8NEV4 1616 aa13.06□□□□□ -0.32
TMEM254-207ENST00000463029 KIF3BO15066 747 aa13.06□□□□□ -0.32
TMEM254-207ENST00000463029 LTBP4Q8N2S1 1624 aa13.06□□□□□ -0.32
TMEM254-207ENST00000463029 LOC105371045A0A1W2PR82 267 aa13.05□□□□□ -0.32
TMEM254-207ENST00000463029 RSPH4AQ5TD94 716 aa13.05□□□□□ -0.32
TMEM254-207ENST00000463029 CEP170BQ9Y4F5 1589 aaPredicted RBP13.05□□□□□ -0.32
TMEM254-207ENST00000463029 PKD2Q13563 968 aa13.04□□□□□ -0.32
TMEM254-207ENST00000463029 VPS8Q8N3P4 1428 aa13.04□□□□□ -0.32
TMEM254-207ENST00000463029 ZNF142P52746 1687 aaPredicted RBP13.03□□□□□ -0.32
TMEM254-207ENST00000463029 TSPY4P0CV99 314 aa13.03□□□□□ -0.32
TMEM254-207ENST00000463029 TSPY10P0CW01 314 aa13.03□□□□□ -0.32
TMEM254-207ENST00000463029 ZNF335Q9H4Z2 1342 aaPredicted RBP13.03□□□□□ -0.32
TMEM254-207ENST00000463029 PLA2R1Q13018 1463 aa13.03□□□□□ -0.32
TMEM254-207ENST00000463029 LRRC9Q6ZRR7 1453 aa13.02□□□□□ -0.33
TMEM254-207ENST00000463029 FBXO31Q5XUX0 539 aaPredicted RBP13.01□□□□□ -0.33
TMEM254-207ENST00000463029 WASHC2CQ9Y4E1 1318 aa13.01□□□□□ -0.33
TMEM254-207ENST00000463029 TNRQ92752 1358 aa13.01□□□□□ -0.33
TMEM254-207ENST00000463029 A2ML1A8K2U0 1454 aa13.01□□□□□ -0.33
TMEM254-207ENST00000463029 TCOF1Q13428 1488 aaKnown RBP13.01□□□□□ -0.33
TMEM254-207ENST00000463029 IQSEC2Q5JU85 1478 aa13.01□□□□□ -0.33
TMEM254-207ENST00000463029 KDM5DQ9BY66 1539 aa13□□□□□ -0.33
TMEM254-207ENST00000463029 ARHGEF5Q12774 1597 aa12.99□□□□□ -0.33
TMEM254-207ENST00000463029 DISP3Q9P2K9 1392 aa12.99□□□□□ -0.33
TMEM254-207ENST00000463029 FAM135AQ9P2D6 1515 aa12.98□□□□□ -0.33
TMEM254-207ENST00000463029 PZPP20742 1482 aa12.98□□□□□ -0.33
TMEM254-207ENST00000463029 KANK4Q5T7N3 995 aaPredicted RBP12.98□□□□□ -0.33
TMEM254-207ENST00000463029 UBAP1LF5GYI3 381 aa12.97□□□□□ -0.33
TMEM254-207ENST00000463029 DNMT1P26358 1616 aaKnown RBP12.97□□□□□ -0.33
TMEM254-207ENST00000463029 RBM42Q9BTD8 480 aaKnown RBP12.95□□□□□ -0.34
TMEM254-207ENST00000463029 MYOM3Q5VTT5 1437 aa12.95□□□□□ -0.34
TMEM254-207ENST00000463029 MIA2Q96PC5 1412 aa12.95□□□□□ -0.34
TMEM254-207ENST00000463029 MAP3K1Q13233 1512 aa12.94□□□□□ -0.34
TMEM254-207ENST00000463029 ANKLE2Q86XL3 938 aa12.93□□□□□ -0.34
TMEM254-207ENST00000463029 THEMISQ8N1K5 641 aaPredicted RBP12.93□□□□□ -0.34
TMEM254-207ENST00000463029 MAST1Q9Y2H9 1570 aa12.93□□□□□ -0.34
TMEM254-207ENST00000463029 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.93□□□□□ -0.34
TMEM254-207ENST00000463029 NLRP1Q9C000 1473 aa12.92□□□□□ -0.34
TMEM254-207ENST00000463029 ABCC3O15438 1527 aa12.92□□□□□ -0.34
TMEM254-207ENST00000463029 NEURL4Q96JN8 1562 aa12.91□□□□□ -0.34
TMEM254-207ENST00000463029 ILDR2Q71H61 639 aa12.91□□□□□ -0.34
TMEM254-207ENST00000463029 RNF17Q9BXT8 1623 aaKnown RBP12.91□□□□□ -0.34
TMEM254-207ENST00000463029 SPATA31D1Q6ZQQ2 1576 aa12.9□□□□□ -0.34
TMEM254-207ENST00000463029 UGGT1Q9NYU2 1555 aa12.9□□□□□ -0.34
TMEM254-207ENST00000463029 EIF2AK4Q9P2K8 1649 aaKnown RBP12.89□□□□□ -0.35
TMEM254-207ENST00000463029 POLR1AO95602 1720 aaPredicted RBP12.89□□□□□ -0.35
TMEM254-207ENST00000463029 SHANK2Q9UPX8 1470 aa12.89□□□□□ -0.35
TMEM254-207ENST00000463029 NPHP4O75161 1426 aaPredicted RBP12.88□□□□□ -0.35
TMEM254-207ENST00000463029 DUOX2Q9NRD8 1548 aa12.88□□□□□ -0.35
TMEM254-207ENST00000463029 ERVK-7P63135 1459 aa12.88□□□□□ -0.35
TMEM254-207ENST00000463029 ZC3H13Q5T200 1668 aaKnown RBP12.88□□□□□ -0.35
TMEM254-207ENST00000463029 CPS1P31327 1500 aa12.88□□□□□ -0.35
TMEM254-207ENST00000463029 KIF15Q9NS87 1388 aa12.87□□□□□ -0.35
TMEM254-207ENST00000463029 MROH1Q8NDA8 1641 aa12.87□□□□□ -0.35
TMEM254-207ENST00000463029 ABCC5O15440 1437 aa12.87□□□□□ -0.35
TMEM254-207ENST00000463029 PIP4K2BP78356 416 aa12.86□□□□□ -0.35
TMEM254-207ENST00000463029 RRP7BPQ9NSQ0 103 aa12.86□□□□□ -0.35
TMEM254-207ENST00000463029 MED14O60244 1454 aa12.85□□□□□ -0.35
TMEM254-207ENST00000463029 VWDEQ8N2E2 1590 aa12.85□□□□□ -0.35
TMEM254-207ENST00000463029 DEPDC5O75140 1603 aa12.84□□□□□ -0.35
TMEM254-207ENST00000463029 SOCS7O14512 581 aa12.84□□□□□ -0.35
TMEM254-207ENST00000463029 TOM1O60784 492 aa12.84□□□□□ -0.35
TMEM254-207ENST00000463029 ERBINQ96RT1 1412 aa12.84□□□□□ -0.35
TMEM254-207ENST00000463029 PTPN23Q9H3S7 1636 aa12.84□□□□□ -0.35
TMEM254-207ENST00000463029 CEP152O94986 1710 aa12.83□□□□□ -0.36
TMEM254-207ENST00000463029 DAPK1P53355 1430 aa12.83□□□□□ -0.36
TMEM254-207ENST00000463029 FGD6Q6ZV73 1430 aa12.83□□□□□ -0.36
TMEM254-207ENST00000463029 HSPA1LP34931 641 aa12.83□□□□□ -0.36
TMEM254-207ENST00000463029 IQGAP1P46940 1657 aa12.82□□□□□ -0.36
TMEM254-207ENST00000463029 PRDM15P57071 1507 aaPredicted RBP12.82□□□□□ -0.36
TMEM254-207ENST00000463029 CROCC2H7BZ55 1655 aa12.81□□□□□ -0.36
TMEM254-207ENST00000463029 CHIC2Q9UKJ5 165 aa12.81□□□□□ -0.36
TMEM254-207ENST00000463029 KANK1Q14678 1352 aa12.81□□□□□ -0.36
TMEM254-207ENST00000463029 ARHGAP31Q2M1Z3 1444 aa12.8□□□□□ -0.36
TMEM254-207ENST00000463029 ANKRD30AQ9BXX3 1397 aa12.8□□□□□ -0.36
TMEM254-207ENST00000463029 SCAF11Q99590 1463 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms