RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 CLUAP1Q96AJ1 413 aa6.96□□□□□ -1.3
GPNMB-205ENST00000463011 ATMINO43313 823 aaPredicted RBP6.95□□□□□ -1.3
GPNMB-205ENST00000463011 PLCG2P16885 1265 aa6.95□□□□□ -1.3
GPNMB-205ENST00000463011 A6NJR5 290 aa6.94□□□□□ -1.3
GPNMB-205ENST00000463011 MMRN1Q13201 1228 aa6.94□□□□□ -1.3
GPNMB-205ENST00000463011 IER5LQ5T953 404 aa6.94□□□□□ -1.3
GPNMB-205ENST00000463011 L3MBTL3Q96JM7 780 aaPredicted RBP6.94□□□□□ -1.3
GPNMB-205ENST00000463011 TRAK2O60296 914 aa6.93□□□□□ -1.3
GPNMB-205ENST00000463011 POTEJP0CG39 1038 aa6.92□□□□□ -1.3
GPNMB-205ENST00000463011 MDM2Q00987 491 aaPredicted RBP6.92□□□□□ -1.3
GPNMB-205ENST00000463011 SH3D19Q5HYK7 790 aa6.92□□□□□ -1.3
GPNMB-205ENST00000463011 CDHR5Q9HBB8 845 aa6.92□□□□□ -1.3
GPNMB-205ENST00000463011 ATP1B4Q9UN42 357 aaPredicted RBP6.92□□□□□ -1.3
GPNMB-205ENST00000463011 CLCN1P35523 988 aa6.91□□□□□ -1.3
GPNMB-205ENST00000463011 NPDC1Q9NQX5 325 aaPredicted RBP6.91□□□□□ -1.3
GPNMB-205ENST00000463011 SSTR3P32745 418 aaPredicted RBP6.9□□□□□ -1.3
GPNMB-205ENST00000463011 ASTLQ6HA08 431 aaPredicted RBP6.9□□□□□ -1.3
GPNMB-205ENST00000463011 CCDC82Q8N4S0 544 aa6.9□□□□□ -1.3
GPNMB-205ENST00000463011 RBM33Q96EV2 1170 aaKnown RBP6.9□□□□□ -1.3
GPNMB-205ENST00000463011 TMUB1Q9BVT8 246 aa6.9□□□□□ -1.3
GPNMB-205ENST00000463011 GPCPD1Q9NPB8 672 aa6.9□□□□□ -1.3
GPNMB-205ENST00000463011 MAP3K7O43318 606 aa6.89□□□□□ -1.31
GPNMB-205ENST00000463011 MCM6Q14566 821 aa6.89□□□□□ -1.31
GPNMB-205ENST00000463011 SKIV2LQ15477 1246 aaKnown RBP6.89□□□□□ -1.31
GPNMB-205ENST00000463011 PTCD2Q8WV60 388 aaKnown RBP6.89□□□□□ -1.31
GPNMB-205ENST00000463011 PHOX2BQ99453 314 aa6.89□□□□□ -1.31
GPNMB-205ENST00000463011 ANO8Q9HCE9 1232 aaPredicted RBP6.89□□□□□ -1.31
GPNMB-205ENST00000463011 PDIA4P13667 645 aaKnown RBP6.88□□□□□ -1.31
GPNMB-205ENST00000463011 EN1Q05925 392 aaPredicted RBP6.88□□□□□ -1.31
GPNMB-205ENST00000463011 PROCA1Q8NCQ7 364 aaPredicted RBP6.88□□□□□ -1.31
GPNMB-205ENST00000463011 BEGAINQ9BUH8 593 aa6.88□□□□□ -1.31
GPNMB-205ENST00000463011 POLR3EQ9NVU0 708 aa6.88□□□□□ -1.31
GPNMB-205ENST00000463011 ZNF777Q9ULD5 760 aaPredicted RBP6.88□□□□□ -1.31
GPNMB-205ENST00000463011 PHF14O94880 888 aa6.87□□□□□ -1.31
GPNMB-205ENST00000463011 SEC24BO95487 1268 aa6.87□□□□□ -1.31
GPNMB-205ENST00000463011 MAMSTRQ6ZN01 415 aa6.87□□□□□ -1.31
GPNMB-205ENST00000463011 EPAS1Q99814 870 aa6.87□□□□□ -1.31
GPNMB-205ENST00000463011 RANGAP1P46060 587 aaPredicted RBP6.86□□□□□ -1.31
GPNMB-205ENST00000463011 TSR1Q2NL82 804 aaKnown RBP6.86□□□□□ -1.31
GPNMB-205ENST00000463011 FAM161AQ3B820 660 aa6.86□□□□□ -1.31
GPNMB-205ENST00000463011 SPNS2Q8IVW8 549 aa6.86□□□□□ -1.31
GPNMB-205ENST00000463011 PELP1Q8IZL8 1130 aaKnown RBP6.86□□□□□ -1.31
GPNMB-205ENST00000463011 NLRP7Q8WX94 980 aa6.86□□□□□ -1.31
GPNMB-205ENST00000463011 COLQQ9Y215 455 aaPredicted RBP6.86□□□□□ -1.31
GPNMB-205ENST00000463011 POM121Q96HA1 1249 aa6.85□□□□□ -1.31
GPNMB-205ENST00000463011 PCDHGA10Q9Y5H3 936 aa6.85□□□□□ -1.31
GPNMB-205ENST00000463011 PROSER2Q86WR7 435 aaPredicted RBP6.84□□□□□ -1.31
GPNMB-205ENST00000463011 SLAIN1Q8ND83 568 aa6.84□□□□□ -1.31
GPNMB-205ENST00000463011 FAM217BQ9NTX9 383 aaPredicted RBP6.84□□□□□ -1.31
GPNMB-205ENST00000463011 RAD21O60216 631 aa6.83□□□□□ -1.32
GPNMB-205ENST00000463011 ZBTB7CA1YPR0 619 aa6.82□□□□□ -1.32
GPNMB-205ENST00000463011 SLC34A2O95436 690 aa6.82□□□□□ -1.32
GPNMB-205ENST00000463011 TYW1BQ6NUM6 668 aa6.82□□□□□ -1.32
GPNMB-205ENST00000463011 METTL3Q86U44 580 aaKnown RBP6.82□□□□□ -1.32
GPNMB-205ENST00000463011 FNBP4Q8N3X1 1017 aaPredicted RBP6.82□□□□□ -1.32
GPNMB-205ENST00000463011 OATP04181 439 aa6.81□□□□□ -1.32
GPNMB-205ENST00000463011 MYSM1Q5VVJ2 828 aa6.81□□□□□ -1.32
GPNMB-205ENST00000463011 PADI6Q6TGC4 694 aa6.8□□□□□ -1.32
GPNMB-205ENST00000463011 C3orf67Q6ZVT6 689 aa6.8□□□□□ -1.32
GPNMB-205ENST00000463011 NPM2Q86SE8 214 aaKnown RBP6.8□□□□□ -1.32
GPNMB-205ENST00000463011 NECTIN2Q92692 538 aa6.8□□□□□ -1.32
GPNMB-205ENST00000463011 CCDC97Q96F63 343 aaPredicted RBP6.8□□□□□ -1.32
GPNMB-205ENST00000463011 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.8□□□□□ -1.32
GPNMB-205ENST00000463011 METRNQ9UJH8 293 aa6.8□□□□□ -1.32
GPNMB-205ENST00000463011 PXYLP1Q8TE99 480 aa6.79□□□□□ -1.32
GPNMB-205ENST00000463011 TBC1D2Q9BYX2 928 aa6.79□□□□□ -1.32
GPNMB-205ENST00000463011 SCUBE2Q9NQ36 999 aa6.79□□□□□ -1.32
GPNMB-205ENST00000463011 SNRKQ9NRH2 765 aa6.79□□□□□ -1.32
GPNMB-205ENST00000463011 SERPINA10Q9UK55 444 aa6.79□□□□□ -1.32
GPNMB-205ENST00000463011 PCDHGA4Q9Y5G9 962 aa6.79□□□□□ -1.32
GPNMB-205ENST00000463011 ADGRG1Q9Y653 693 aa6.79□□□□□ -1.32
GPNMB-205ENST00000463011 POTEFA5A3E0 1075 aa6.78□□□□□ -1.32
GPNMB-205ENST00000463011 SPDYE5A6NIY4 337 aa6.78□□□□□ -1.32
GPNMB-205ENST00000463011 CLK2P49760 499 aaKnown RBP6.78□□□□□ -1.32
GPNMB-205ENST00000463011 FBXW7Q969H0 707 aa6.78□□□□□ -1.32
GPNMB-205ENST00000463011 COG6Q9Y2V7 657 aa6.78□□□□□ -1.32
GPNMB-205ENST00000463011 RFC5P40937 340 aa6.77□□□□□ -1.33
GPNMB-205ENST00000463011 C6orf132Q5T0Z8 1188 aa6.77□□□□□ -1.33
GPNMB-205ENST00000463011 FBXO31Q5XUX0 539 aaPredicted RBP6.76□□□□□ -1.33
GPNMB-205ENST00000463011 BANK1Q8NDB2 785 aa6.76□□□□□ -1.33
GPNMB-205ENST00000463011 CERKQ8TCT0 537 aa6.76□□□□□ -1.33
GPNMB-205ENST00000463011 SLC39A7Q92504 469 aa6.76□□□□□ -1.33
GPNMB-205ENST00000463011 JPH4Q96JJ6 628 aa6.76□□□□□ -1.33
GPNMB-205ENST00000463011 ZNF330Q9Y3S2 320 aaPredicted RBP6.76□□□□□ -1.33
GPNMB-205ENST00000463011 LIMD1Q9UGP4 676 aa6.75□□□□□ -1.33
GPNMB-205ENST00000463011 C7P10643 843 aa6.74□□□□□ -1.33
GPNMB-205ENST00000463011 FOSBP53539 338 aa6.74□□□□□ -1.33
GPNMB-205ENST00000463011 TMEM259Q4ZIN3 620 aa6.74□□□□□ -1.33
GPNMB-205ENST00000463011 ZNF454Q8N9F8 522 aa6.74□□□□□ -1.33
GPNMB-205ENST00000463011 TTC13Q8NBP0 860 aa6.74□□□□□ -1.33
GPNMB-205ENST00000463011 CCDC9Q9Y3X0 531 aaKnown RBP6.74□□□□□ -1.33
GPNMB-205ENST00000463011 KDM4FA0A1W2PPD8 638 aa6.73□□□□□ -1.33
GPNMB-205ENST00000463011 DIXDC1Q155Q3 683 aa6.73□□□□□ -1.33
GPNMB-205ENST00000463011 RIC3Q7Z5B4 369 aa6.73□□□□□ -1.33
GPNMB-205ENST00000463011 RBM46Q8TBY0 533 aaKnown RBP6.73□□□□□ -1.33
GPNMB-205ENST00000463011 SPIRE2Q8WWL2 714 aa6.73□□□□□ -1.33
GPNMB-205ENST00000463011 ZDHHC16Q969W1 377 aa6.73□□□□□ -1.33
GPNMB-205ENST00000463011 TRAIPQ9BWF2 469 aa6.73□□□□□ -1.33
GPNMB-205ENST00000463011 GDPD2Q9HCC8 539 aa6.72□□□□□ -1.33
GPNMB-205ENST00000463011 PRSS12P56730 875 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms