RNA–Protein interactions for RNA: ENST00000462777.1

HLA-F-222, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 779 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-222ENST00000462777 A2ML1A8K2U0 1454 aa31.55■■■□□ 2.64
HLA-F-222ENST00000462777 TCOF1Q13428 1488 aaKnown RBP31.55■■■□□ 2.64
HLA-F-222ENST00000462777 TNRQ92752 1358 aa31.55■■■□□ 2.64
HLA-F-222ENST00000462777 FBXO31Q5XUX0 539 aaPredicted RBP31.53■■■□□ 2.64
HLA-F-222ENST00000462777 VPS8Q8N3P4 1428 aa31.52■■■□□ 2.64
HLA-F-222ENST00000462777 FAM135AQ9P2D6 1515 aa31.51■■■□□ 2.63
HLA-F-222ENST00000462777 LOC105371045A0A1W2PR82 267 aa31.51■■■□□ 2.63
HLA-F-222ENST00000462777 KDM5DQ9BY66 1539 aa31.49■■■□□ 2.63
HLA-F-222ENST00000462777 LRRC9Q6ZRR7 1453 aa31.49■■■□□ 2.63
HLA-F-222ENST00000462777 UBAP1LF5GYI3 381 aa31.49■■■□□ 2.63
HLA-F-222ENST00000462777 PZPP20742 1482 aa31.48■■■□□ 2.63
HLA-F-222ENST00000462777 ARHGEF5Q12774 1597 aa31.47■■■□□ 2.63
HLA-F-222ENST00000462777 THEMISQ8N1K5 641 aaPredicted RBP31.45■■■□□ 2.63
HLA-F-222ENST00000462777 ANKLE2Q86XL3 938 aa31.44■■■□□ 2.62
HLA-F-222ENST00000462777 DNMT1P26358 1616 aaKnown RBP31.43■■■□□ 2.62
HLA-F-222ENST00000462777 MIA2Q96PC5 1412 aa31.41■■■□□ 2.62
HLA-F-222ENST00000462777 KANK4Q5T7N3 995 aaPredicted RBP31.4■■■□□ 2.62
HLA-F-222ENST00000462777 NLRP1Q9C000 1473 aa31.38■■■□□ 2.61
HLA-F-222ENST00000462777 MAP3K1Q13233 1512 aa31.36■■■□□ 2.61
HLA-F-222ENST00000462777 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.35■■■□□ 2.61
HLA-F-222ENST00000462777 APLP2Q06481 763 aa31.35■■■□□ 2.61
HLA-F-222ENST00000462777 ILDR2Q71H61 639 aa31.34■■■□□ 2.61
HLA-F-222ENST00000462777 MYOM3Q5VTT5 1437 aa31.33■■■□□ 2.61
HLA-F-222ENST00000462777 MAST1Q9Y2H9 1570 aa31.3■■■□□ 2.6
HLA-F-222ENST00000462777 UGGT1Q9NYU2 1555 aa31.3■■■□□ 2.6
HLA-F-222ENST00000462777 TOM1O60784 492 aa31.28■■■□□ 2.6
HLA-F-222ENST00000462777 SPATA31D1Q6ZQQ2 1576 aa31.28■■■□□ 2.6
HLA-F-222ENST00000462777 CPS1P31327 1500 aa31.27■■■□□ 2.6
HLA-F-222ENST00000462777 SHANK2Q9UPX8 1470 aa31.27■■■□□ 2.6
HLA-F-222ENST00000462777 SCAF1Q9H7N4 1312 aaKnown RBP31.26■■■□□ 2.6
HLA-F-222ENST00000462777 SOCS7O14512 581 aa31.26■■■□□ 2.59
HLA-F-222ENST00000462777 ABCC3O15438 1527 aa31.25■■■□□ 2.59
HLA-F-222ENST00000462777 RNF17Q9BXT8 1623 aaKnown RBP31.24■■■□□ 2.59
HLA-F-222ENST00000462777 NEURL4Q96JN8 1562 aa31.24■■■□□ 2.59
HLA-F-222ENST00000462777 NPHP4O75161 1426 aaPredicted RBP31.24■■■□□ 2.59
HLA-F-222ENST00000462777 POLR1AO95602 1720 aaPredicted RBP31.23■■■□□ 2.59
HLA-F-222ENST00000462777 PIP4K2BP78356 416 aa31.21■■■□□ 2.59
HLA-F-222ENST00000462777 EIF2AK4Q9P2K8 1649 aaKnown RBP31.2■■■□□ 2.59
HLA-F-222ENST00000462777 DUOX2Q9NRD8 1548 aa31.2■■■□□ 2.59
HLA-F-222ENST00000462777 MED14O60244 1454 aa31.2■■■□□ 2.58
HLA-F-222ENST00000462777 ZC3H13Q5T200 1668 aaKnown RBP31.19■■■□□ 2.58
HLA-F-222ENST00000462777 RRP7BPQ9NSQ0 103 aa31.18■■■□□ 2.58
HLA-F-222ENST00000462777 ERVK-7P63135 1459 aa31.18■■■□□ 2.58
HLA-F-222ENST00000462777 KIF15Q9NS87 1388 aa31.17■■■□□ 2.58
HLA-F-222ENST00000462777 DEPDC5O75140 1603 aa31.15■■■□□ 2.58
HLA-F-222ENST00000462777 HSPA1LP34931 641 aa31.12■■■□□ 2.57
HLA-F-222ENST00000462777 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.12■■■□□ 2.57
HLA-F-222ENST00000462777 ABCC5O15440 1437 aa31.12■■■□□ 2.57
HLA-F-222ENST00000462777 ERBINQ96RT1 1412 aa31.11■■■□□ 2.57
HLA-F-222ENST00000462777 VWDEQ8N2E2 1590 aa31.1■■■□□ 2.57
HLA-F-222ENST00000462777 KANK1Q14678 1352 aa31.09■■■□□ 2.57
HLA-F-222ENST00000462777 MROH1Q8NDA8 1641 aa31.09■■■□□ 2.57
HLA-F-222ENST00000462777 ARHGAP31Q2M1Z3 1444 aa31.07■■■□□ 2.56
HLA-F-222ENST00000462777 TXNDC2Q86VQ3 553 aa31.06■■■□□ 2.56
HLA-F-222ENST00000462777 EID1Q9Y6B2 187 aa31.06■■■□□ 2.56
HLA-F-222ENST00000462777 IQGAP1P46940 1657 aa31.05■■■□□ 2.56
HLA-F-222ENST00000462777 DAPK1P53355 1430 aa31.05■■■□□ 2.56
HLA-F-222ENST00000462777 PTPN23Q9H3S7 1636 aa31.05■■■□□ 2.56
HLA-F-222ENST00000462777 STAG3Q9UJ98 1225 aa31.04■■■□□ 2.56
HLA-F-222ENST00000462777 CHIC2Q9UKJ5 165 aa31.03■■■□□ 2.56
HLA-F-222ENST00000462777 FGD6Q6ZV73 1430 aa31.03■■■□□ 2.56
HLA-F-222ENST00000462777 ANKRD30AQ9BXX3 1397 aa31.03■■■□□ 2.56
HLA-F-222ENST00000462777 SCAF11Q99590 1463 aaKnown RBP31.01■■■□□ 2.56
HLA-F-222ENST00000462777 CEP152O94986 1710 aa31.01■■■□□ 2.56
HLA-F-222ENST00000462777 PRDM15P57071 1507 aaPredicted RBP31.01■■■□□ 2.55
HLA-F-222ENST00000462777 LTKP29376 864 aa30.99■■■□□ 2.55
HLA-F-222ENST00000462777 LRRC7Q96NW7 1537 aa30.95■■■□□ 2.55
HLA-F-222ENST00000462777 UBR1Q8IWV7 1749 aa30.95■■■□□ 2.54
HLA-F-222ENST00000462777 CROCC2H7BZ55 1655 aa30.94■■■□□ 2.54
HLA-F-222ENST00000462777 CFAP65Q6ZU64 1925 aaKnown RBP30.94■■■□□ 2.54
HLA-F-222ENST00000462777 ARHGAP23Q9P227 1491 aa30.94■■■□□ 2.54
HLA-F-222ENST00000462777 SLIT1O75093 1534 aa30.93■■■□□ 2.54
HLA-F-222ENST00000462777 TMEM2Q9UHN6 1383 aa30.91■■■□□ 2.54
HLA-F-222ENST00000462777 IDI1Q13907 227 aa30.89■■■□□ 2.54
HLA-F-222ENST00000462777 FAM50AQ14320 339 aaKnown RBP30.89■■■□□ 2.54
HLA-F-222ENST00000462777 SYNMO15061 1565 aa30.88■■■□□ 2.53
HLA-F-222ENST00000462777 PHF23Q9BUL5 403 aaPredicted RBP30.86■■■□□ 2.53
HLA-F-222ENST00000462777 SENP3Q9H4L4 574 aaPredicted RBP30.86■■■□□ 2.53
HLA-F-222ENST00000462777 LMTK2Q8IWU2 1503 aa30.86■■■□□ 2.53
HLA-F-222ENST00000462777 MED1Q15648 1581 aaPredicted RBP30.84■■■□□ 2.53
HLA-F-222ENST00000462777 SLC52A1Q9NWF4 448 aa30.83■■■□□ 2.53
HLA-F-222ENST00000462777 ALKQ9UM73 1620 aa30.82■■■□□ 2.52
HLA-F-222ENST00000462777 STRCP1A6NGW2 1772 aa30.82■■■□□ 2.52
HLA-F-222ENST00000462777 PIK3C2BO00750 1634 aa30.81■■■□□ 2.52
HLA-F-222ENST00000462777 EFCAB6Q5THR3 1501 aa30.81■■■□□ 2.52
HLA-F-222ENST00000462777 ADGRL2O95490 1459 aa30.78■■■□□ 2.52
HLA-F-222ENST00000462777 NOS1P29475 1434 aa30.77■■■□□ 2.52
HLA-F-222ENST00000462777 BCANQ96GW7 911 aa30.77■■■□□ 2.52
HLA-F-222ENST00000462777 ANKRD50Q9ULJ7 1429 aa30.76■■■□□ 2.51
HLA-F-222ENST00000462777 KCNA6P17658 529 aa30.76■■■□□ 2.51
HLA-F-222ENST00000462777 SLC26A8Q96RN1 970 aa30.75■■■□□ 2.51
HLA-F-222ENST00000462777 HDGFP51858 240 aaKnown RBP30.73■■■□□ 2.51
HLA-F-222ENST00000462777 KDM5AP29375 1690 aaKnown RBP30.72■■■□□ 2.51
HLA-F-222ENST00000462777 PROSER2Q86WR7 435 aaPredicted RBP30.72■■■□□ 2.51
HLA-F-222ENST00000462777 TMEM94Q12767 1356 aa30.7■■■□□ 2.51
HLA-F-222ENST00000462777 RPRD2Q5VT52 1461 aaKnown RBP30.7■■■□□ 2.5
HLA-F-222ENST00000462777 ADGRB3O60242 1522 aa30.67■■■□□ 2.5
HLA-F-222ENST00000462777 FAM135BQ49AJ0 1406 aa30.65■■■□□ 2.5
HLA-F-222ENST00000462777 PPP1R15AO75807 674 aaPredicted RBP30.65■■■□□ 2.5
HLA-F-222ENST00000462777 TET3O43151 1660 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms