RNA–Protein interactions for RNA: ENST00000462438.1

RAE1-207, Transcript of ribonucleic acid export 1, humanhuman

TSL 2

Gene RAE1, Length 3,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-207ENST00000462438 VWDEQ8N2E2 1590 aa17.98■□□□□ 0.47
RAE1-207ENST00000462438 RAB3GAP2Q9H2M9 1393 aa17.97■□□□□ 0.47
RAE1-207ENST00000462438 PRDM15P57071 1507 aaPredicted RBP17.97■□□□□ 0.47
RAE1-207ENST00000462438 IQGAP3Q86VI3 1631 aa17.96■□□□□ 0.47
RAE1-207ENST00000462438 ZC3H13Q5T200 1668 aaKnown RBP17.94■□□□□ 0.46
RAE1-207ENST00000462438 MROH1Q8NDA8 1641 aa17.94■□□□□ 0.46
RAE1-207ENST00000462438 LMTK2Q8IWU2 1503 aa17.93■□□□□ 0.46
RAE1-207ENST00000462438 RAPGEF3O95398 923 aa17.92■□□□□ 0.46
RAE1-207ENST00000462438 ITGAEP38570 1179 aa17.92■□□□□ 0.46
RAE1-207ENST00000462438 YEATS2Q9ULM3 1422 aa17.92■□□□□ 0.46
RAE1-207ENST00000462438 CHIC2Q9UKJ5 165 aa17.91■□□□□ 0.46
RAE1-207ENST00000462438 GTF3C3Q9Y5Q9 886 aa17.89■□□□□ 0.45
RAE1-207ENST00000462438 RRP7BPQ9NSQ0 103 aa17.89■□□□□ 0.45
RAE1-207ENST00000462438 TET3O43151 1660 aa17.87■□□□□ 0.45
RAE1-207ENST00000462438 CLSPNQ9HAW4 1339 aa17.87■□□□□ 0.45
RAE1-207ENST00000462438 PPP6R1Q9UPN7 881 aa17.86■□□□□ 0.45
RAE1-207ENST00000462438 SIGLEC1Q9BZZ2 1709 aa17.86■□□□□ 0.45
RAE1-207ENST00000462438 PZPP20742 1482 aa17.86■□□□□ 0.45
RAE1-207ENST00000462438 MROH2AA6NES4 1674 aa17.82■□□□□ 0.44
RAE1-207ENST00000462438 DHX57Q6P158 1386 aaKnown RBP17.82■□□□□ 0.44
RAE1-207ENST00000462438 NEUROD1Q13562 356 aa17.82■□□□□ 0.44
RAE1-207ENST00000462438 RPRD2Q5VT52 1461 aaKnown RBP17.8■□□□□ 0.44
RAE1-207ENST00000462438 EFCAB6Q5THR3 1501 aa17.79■□□□□ 0.44
RAE1-207ENST00000462438 ABCC3O15438 1527 aa17.79■□□□□ 0.44
RAE1-207ENST00000462438 KANK1Q14678 1352 aa17.79■□□□□ 0.44
RAE1-207ENST00000462438 ARHGAP31Q2M1Z3 1444 aa17.79■□□□□ 0.44
RAE1-207ENST00000462438 CAMSAP1Q5T5Y3 1602 aa17.78■□□□□ 0.44
RAE1-207ENST00000462438 CEP152O94986 1710 aa17.77■□□□□ 0.44
RAE1-207ENST00000462438 E9PCH4 1651 aa17.75■□□□□ 0.43
RAE1-207ENST00000462438 NUP155O75694 1391 aa17.75■□□□□ 0.43
RAE1-207ENST00000462438 CNTLNQ9NXG0 1405 aa17.74■□□□□ 0.43
RAE1-207ENST00000462438 NEURL4Q96JN8 1562 aa17.74■□□□□ 0.43
RAE1-207ENST00000462438 MYT1LQ9UL68 1186 aa17.73■□□□□ 0.43
RAE1-207ENST00000462438 SPHKAPQ2M3C7 1700 aa17.72■□□□□ 0.43
RAE1-207ENST00000462438 ADAMTSL3P82987 1691 aa17.72■□□□□ 0.43
RAE1-207ENST00000462438 KIF3BO15066 747 aa17.71■□□□□ 0.43
RAE1-207ENST00000462438 MPHOSPH9Q99550 1183 aa17.71■□□□□ 0.42
RAE1-207ENST00000462438 PTPRTO14522 1441 aa17.71■□□□□ 0.42
RAE1-207ENST00000462438 TRPM2O94759 1503 aa17.7■□□□□ 0.42
RAE1-207ENST00000462438 CLTCQ00610 1675 aaKnown RBP17.69■□□□□ 0.42
RAE1-207ENST00000462438 FER1L4A9Z1Z3 1794 aa17.69■□□□□ 0.42
RAE1-207ENST00000462438 ANKRD30BQ9BXX2 1392 aa17.66■□□□□ 0.42
RAE1-207ENST00000462438 TRIM52Q96A61 297 aa17.66■□□□□ 0.42
RAE1-207ENST00000462438 PREX1Q8TCU6 1659 aa17.65■□□□□ 0.42
RAE1-207ENST00000462438 PIK3C2BO00750 1634 aa17.65■□□□□ 0.42
RAE1-207ENST00000462438 SPATA31D1Q6ZQQ2 1576 aa17.65■□□□□ 0.42
RAE1-207ENST00000462438 SLC4A1APQ9BWU0 796 aaKnown RBP17.64■□□□□ 0.41
RAE1-207ENST00000462438 NOS1P29475 1434 aa17.64■□□□□ 0.41
RAE1-207ENST00000462438 KDM5AP29375 1690 aaKnown RBP17.63■□□□□ 0.41
RAE1-207ENST00000462438 NPATQ14207 1427 aa17.63■□□□□ 0.41
RAE1-207ENST00000462438 PLA2R1Q13018 1463 aa17.61■□□□□ 0.41
RAE1-207ENST00000462438 TIMELESSQ9UNS1 1208 aa17.6■□□□□ 0.41
RAE1-207ENST00000462438 C3P01024 1663 aa17.59■□□□□ 0.41
RAE1-207ENST00000462438 PKD2Q13563 968 aa17.59■□□□□ 0.41
RAE1-207ENST00000462438 WASHC2CQ9Y4E1 1318 aa17.59■□□□□ 0.41
RAE1-207ENST00000462438 CENPBP07199 599 aaPredicted RBP17.59■□□□□ 0.41
RAE1-207ENST00000462438 ERVK-7P63135 1459 aa17.58■□□□□ 0.41
RAE1-207ENST00000462438 MADDQ8WXG6 1647 aa17.58■□□□□ 0.41
RAE1-207ENST00000462438 SYNMO15061 1565 aa17.58■□□□□ 0.4
RAE1-207ENST00000462438 CCER1Q8TC90 406 aaPredicted RBP17.57■□□□□ 0.4
RAE1-207ENST00000462438 CLTCL1P53675 1640 aa17.57■□□□□ 0.4
RAE1-207ENST00000462438 GGT6Q6P531 493 aa17.57■□□□□ 0.4
RAE1-207ENST00000462438 ZEB1P37275 1124 aaPredicted RBP17.55■□□□□ 0.4
RAE1-207ENST00000462438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.55■□□□□ 0.41e-6■□□□□ 9.2
RAE1-207ENST00000462438 KIF1BO60333 1816 aa17.55■□□□□ 0.4
RAE1-207ENST00000462438 RIMS1Q86UR5 1692 aaKnown RBP17.54■□□□□ 0.4
RAE1-207ENST00000462438 ADGRB3O60242 1522 aa17.52■□□□□ 0.4
RAE1-207ENST00000462438 ZMYM3Q14202 1370 aa17.52■□□□□ 0.4
RAE1-207ENST00000462438 CCDC144AA2RUR9 1427 aa17.52■□□□□ 0.39
RAE1-207ENST00000462438 IFT172Q9UG01 1749 aa17.5■□□□□ 0.39
RAE1-207ENST00000462438 ARID4BQ4LE39 1312 aaPredicted RBP17.5■□□□□ 0.39
RAE1-207ENST00000462438 ZNF142P52746 1687 aaPredicted RBP17.5■□□□□ 0.39
RAE1-207ENST00000462438 SPATA31E1Q6ZUB1 1445 aa17.5■□□□□ 0.39
RAE1-207ENST00000462438 NLRP1Q9C000 1473 aa17.5■□□□□ 0.39
RAE1-207ENST00000462438 TMEM131LA2VDJ0 1609 aa17.47■□□□□ 0.39
RAE1-207ENST00000462438 SLC52A1Q9NWF4 448 aa17.47■□□□□ 0.39
RAE1-207ENST00000462438 STAC3Q96MF2 364 aa17.47■□□□□ 0.39
RAE1-207ENST00000462438 ESF1Q9H501 851 aaKnown RBP17.46■□□□□ 0.39
RAE1-207ENST00000462438 MYO3AQ8NEV4 1616 aa17.45■□□□□ 0.38
RAE1-207ENST00000462438 SETD1BQ9UPS6 1966 aaKnown RBP17.43■□□□□ 0.38
RAE1-207ENST00000462438 YTHDC1Q96MU7 727 aaKnown RBP17.43■□□□□ 0.38
RAE1-207ENST00000462438 PPLO60437 1756 aa17.43■□□□□ 0.38
RAE1-207ENST00000462438 MYOM2P54296 1465 aa17.43■□□□□ 0.38
RAE1-207ENST00000462438 PTPRMP28827 1452 aa17.43■□□□□ 0.38
RAE1-207ENST00000462438 UBR1Q8IWV7 1749 aa17.42■□□□□ 0.38
RAE1-207ENST00000462438 TNRQ92752 1358 aa17.42■□□□□ 0.38
RAE1-207ENST00000462438 UHRF1BP1Q6BDS2 1440 aa17.42■□□□□ 0.38
RAE1-207ENST00000462438 FOXD1Q16676 465 aa17.41■□□□□ 0.38
RAE1-207ENST00000462438 UGGT1Q9NYU2 1555 aa17.41■□□□□ 0.38
RAE1-207ENST00000462438 CFAP65Q6ZU64 1925 aaKnown RBP17.41■□□□□ 0.38
RAE1-207ENST00000462438 KIAA1210Q9ULL0 1709 aa17.4■□□□□ 0.38
RAE1-207ENST00000462438 ZFYVE9O95405 1425 aa17.4■□□□□ 0.38
RAE1-207ENST00000462438 MLECQ14165 292 aa17.4■□□□□ 0.38
RAE1-207ENST00000462438 RPGRIP1LQ68CZ1 1315 aa17.39■□□□□ 0.38
RAE1-207ENST00000462438 NRXN1Q9ULB1 1477 aa17.39■□□□□ 0.37
RAE1-207ENST00000462438 A2ML1A8K2U0 1454 aa17.39■□□□□ 0.37
RAE1-207ENST00000462438 TONSLQ96HA7 1378 aa17.38■□□□□ 0.37
RAE1-207ENST00000462438 NEXMIFQ5QGS0 1516 aa17.37■□□□□ 0.37
RAE1-207ENST00000462438 MYO5BQ9ULV0 1848 aa17.37■□□□□ 0.37
RAE1-207ENST00000462438 CEP170BQ9Y4F5 1589 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms