RNA–Protein interactions for RNA: ENST00000462394.1

LDLRAP1-202, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 369 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-202ENST00000462394 PLXNC1O60486 1568 aa7.09□□□□□ -1.27
LDLRAP1-202ENST00000462394 CSRNP3Q8WYN3 585 aa7.09□□□□□ -1.27
LDLRAP1-202ENST00000462394 CLTCQ00610 1675 aaKnown RBP7.09□□□□□ -1.27
LDLRAP1-202ENST00000462394 CLIP1P30622 1438 aa7.09□□□□□ -1.28
LDLRAP1-202ENST00000462394 TNRQ92752 1358 aa7.08□□□□□ -1.28
LDLRAP1-202ENST00000462394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.08□□□□□ -1.28
LDLRAP1-202ENST00000462394 SAMD9LQ8IVG5 1584 aa7.08□□□□□ -1.28
LDLRAP1-202ENST00000462394 SPAG9O60271 1321 aaKnown RBP7.07□□□□□ -1.28
LDLRAP1-202ENST00000462394 A2MP01023 1474 aa7.07□□□□□ -1.28
LDLRAP1-202ENST00000462394 NLRP1Q9C000 1473 aa7.07□□□□□ -1.28
LDLRAP1-202ENST00000462394 GGT6Q6P531 493 aa7.07□□□□□ -1.28
LDLRAP1-202ENST00000462394 CDC42BPBQ9Y5S2 1711 aa7.07□□□□□ -1.28
LDLRAP1-202ENST00000462394 ITSN2Q9NZM3 1697 aa7.06□□□□□ -1.28
LDLRAP1-202ENST00000462394 FBXO31Q5XUX0 539 aaPredicted RBP7.06□□□□□ -1.28
LDLRAP1-202ENST00000462394 FMN1Q68DA7 1419 aa7.06□□□□□ -1.28
LDLRAP1-202ENST00000462394 SETD1AO15047 1707 aaKnown RBP7.06□□□□□ -1.28
LDLRAP1-202ENST00000462394 PREX2Q70Z35 1606 aa7.05□□□□□ -1.28
LDLRAP1-202ENST00000462394 PZPP20742 1482 aa7.05□□□□□ -1.28
LDLRAP1-202ENST00000462394 MIA2Q96PC5 1412 aa7.05□□□□□ -1.28
LDLRAP1-202ENST00000462394 KIAA1107Q9UPP5 1409 aa7.05□□□□□ -1.28
LDLRAP1-202ENST00000462394 C1QBPQ07021 282 aaKnown RBP7.05□□□□□ -1.28
LDLRAP1-202ENST00000462394 KDM5DQ9BY66 1539 aa7.05□□□□□ -1.28
LDLRAP1-202ENST00000462394 FAM135AQ9P2D6 1515 aa7.05□□□□□ -1.28
LDLRAP1-202ENST00000462394 STRCP1A6NGW2 1772 aa7.05□□□□□ -1.28
LDLRAP1-202ENST00000462394 CDK12Q9NYV4 1490 aaPredicted RBP7.04□□□□□ -1.28
LDLRAP1-202ENST00000462394 UGGT1Q9NYU2 1555 aa7.04□□□□□ -1.28
LDLRAP1-202ENST00000462394 RANGAP1P46060 587 aaPredicted RBP7.04□□□□□ -1.28
LDLRAP1-202ENST00000462394 ZNF772Q68DY9 489 aaPredicted RBP7.04□□□□□ -1.28
LDLRAP1-202ENST00000462394 ATP7AQ04656 1500 aa7.04□□□□□ -1.28
LDLRAP1-202ENST00000462394 IQGAP1P46940 1657 aa7.03□□□□□ -1.28
LDLRAP1-202ENST00000462394 JCADQ9P266 1359 aa7.03□□□□□ -1.28
LDLRAP1-202ENST00000462394 INO80Q9ULG1 1556 aaPredicted RBP7.03□□□□□ -1.28
LDLRAP1-202ENST00000462394 SLC4A2P04920 1241 aa7.02□□□□□ -1.29
LDLRAP1-202ENST00000462394 U3KPZ7 1027 aaPredicted RBP7.02□□□□□ -1.29
LDLRAP1-202ENST00000462394 SPATA31A6Q5VVP1 1343 aa7.01□□□□□ -1.29
LDLRAP1-202ENST00000462394 LRRC9Q6ZRR7 1453 aa7.01□□□□□ -1.29
LDLRAP1-202ENST00000462394 PLEKHH2Q8IVE3 1493 aa7.01□□□□□ -1.29
LDLRAP1-202ENST00000462394 RXRBP28702 533 aa7.01□□□□□ -1.29
LDLRAP1-202ENST00000462394 HNRNPMP52272 730 aaKnown RBP eCLIP7.01□□□□□ -1.29
LDLRAP1-202ENST00000462394 ATP1B4Q9UN42 357 aaPredicted RBP7.01□□□□□ -1.29
LDLRAP1-202ENST00000462394 ZC3H13Q5T200 1668 aaKnown RBP7□□□□□ -1.29
LDLRAP1-202ENST00000462394 DHX29Q7Z478 1369 aaKnown RBP7□□□□□ -1.29
LDLRAP1-202ENST00000462394 TRIM52Q96A61 297 aa7□□□□□ -1.29
LDLRAP1-202ENST00000462394 SYCP2Q9BX26 1530 aa7□□□□□ -1.29
LDLRAP1-202ENST00000462394 RTEL1-TNFRSF6BF6WH68 1400 aa7□□□□□ -1.29
LDLRAP1-202ENST00000462394 EEA1Q15075 1411 aa7□□□□□ -1.29
LDLRAP1-202ENST00000462394 FGD6Q6ZV73 1430 aa7□□□□□ -1.29
LDLRAP1-202ENST00000462394 GPATCH8Q9UKJ3 1502 aaKnown RBP6.99□□□□□ -1.29
LDLRAP1-202ENST00000462394 WASHC2CQ9Y4E1 1318 aa6.99□□□□□ -1.29
LDLRAP1-202ENST00000462394 SCAF11Q99590 1463 aaKnown RBP6.98□□□□□ -1.29
LDLRAP1-202ENST00000462394 TMEM94Q12767 1356 aa6.98□□□□□ -1.29
LDLRAP1-202ENST00000462394 ROBO1Q9Y6N7 1651 aa6.98□□□□□ -1.29
LDLRAP1-202ENST00000462394 ZNF777Q9ULD5 760 aaPredicted RBP6.98□□□□□ -1.29
LDLRAP1-202ENST00000462394 XIRP1Q702N8 1843 aaKnown RBP6.98□□□□□ -1.29
LDLRAP1-202ENST00000462394 ARHGAP23Q9P227 1491 aa6.98□□□□□ -1.29
LDLRAP1-202ENST00000462394 LRP6O75581 1613 aa6.98□□□□□ -1.29
LDLRAP1-202ENST00000462394 ADGBQ8N7X0 1667 aa6.97□□□□□ -1.29
LDLRAP1-202ENST00000462394 KCNA6P17658 529 aa6.97□□□□□ -1.29
LDLRAP1-202ENST00000462394 LTKP29376 864 aa6.97□□□□□ -1.29
LDLRAP1-202ENST00000462394 SLAIN2Q9P270 581 aa6.97□□□□□ -1.29
LDLRAP1-202ENST00000462394 ZRANB1Q9UGI0 708 aa6.97□□□□□ -1.29
LDLRAP1-202ENST00000462394 ARHGAP35Q9NRY4 1499 aa6.97□□□□□ -1.29
LDLRAP1-202ENST00000462394 SLIT1O75093 1534 aa6.96□□□□□ -1.29
LDLRAP1-202ENST00000462394 MAP3K1Q13233 1512 aa6.96□□□□□ -1.29
LDLRAP1-202ENST00000462394 CDC42BPAQ5VT25 1732 aa6.96□□□□□ -1.29
LDLRAP1-202ENST00000462394 KIF3BO15066 747 aa6.96□□□□□ -1.3
LDLRAP1-202ENST00000462394 CCDC18Q5T9S5 1454 aa6.96□□□□□ -1.3
LDLRAP1-202ENST00000462394 TXNDC2Q86VQ3 553 aa6.95□□□□□ -1.3
LDLRAP1-202ENST00000462394 SPINK5Q9NQ38 1064 aaPredicted RBP6.95□□□□□ -1.3
LDLRAP1-202ENST00000462394 CFDP1Q9UEE9 299 aaPredicted RBP6.95□□□□□ -1.3
LDLRAP1-202ENST00000462394 NCOA2Q15596 1464 aa6.95□□□□□ -1.3
LDLRAP1-202ENST00000462394 MBD5Q9P267 1494 aa6.95□□□□□ -1.3
LDLRAP1-202ENST00000462394 COL16A1Q07092 1604 aaPredicted RBP6.94□□□□□ -1.3
LDLRAP1-202ENST00000462394 MEX3CQ5U5Q3 659 aaKnown RBP6.94□□□□□ -1.3
LDLRAP1-202ENST00000462394 ABCC3O15438 1527 aa6.94□□□□□ -1.3
LDLRAP1-202ENST00000462394 PRDM15P57071 1507 aaPredicted RBP6.94□□□□□ -1.3
LDLRAP1-202ENST00000462394 RGS12O14924 1447 aa6.93□□□□□ -1.3
LDLRAP1-202ENST00000462394 CASKIN1Q8WXD9 1431 aa6.93□□□□□ -1.3
LDLRAP1-202ENST00000462394 LRRIQ1Q96JM4 1722 aa6.93□□□□□ -1.3
LDLRAP1-202ENST00000462394 RBM6P78332 1123 aaKnown RBP6.93□□□□□ -1.3
LDLRAP1-202ENST00000462394 PROSER2Q86WR7 435 aaPredicted RBP6.93□□□□□ -1.3
LDLRAP1-202ENST00000462394 EID1Q9Y6B2 187 aa6.93□□□□□ -1.3
LDLRAP1-202ENST00000462394 SETBP1Q9Y6X0 1596 aa6.93□□□□□ -1.3
LDLRAP1-202ENST00000462394 MSH6P52701 1360 aa6.93□□□□□ -1.3
LDLRAP1-202ENST00000462394 PHLPP1O60346 1717 aa6.93□□□□□ -1.3
LDLRAP1-202ENST00000462394 NKTRP30414 1462 aaKnown RBP6.92□□□□□ -1.3
LDLRAP1-202ENST00000462394 ERVK-7P63135 1459 aa6.92□□□□□ -1.3
LDLRAP1-202ENST00000462394 CCDC125Q86Z20 511 aa6.92□□□□□ -1.3
LDLRAP1-202ENST00000462394 ATAD2Q6PL18 1390 aa6.92□□□□□ -1.3
LDLRAP1-202ENST00000462394 NCOA3Q9Y6Q9 1424 aa6.92□□□□□ -1.3
LDLRAP1-202ENST00000462394 CAMSAP2Q08AD1 1489 aa6.92□□□□□ -1.3
LDLRAP1-202ENST00000462394 TIAM1Q13009 1591 aa6.91□□□□□ -1.3
LDLRAP1-202ENST00000462394 RSPH4AQ5TD94 716 aa6.91□□□□□ -1.3
LDLRAP1-202ENST00000462394 AFF2P51816 1311 aa6.91□□□□□ -1.3
LDLRAP1-202ENST00000462394 TMEM2Q9UHN6 1383 aa6.91□□□□□ -1.3
LDLRAP1-202ENST00000462394 AHDC1Q5TGY3 1603 aaPredicted RBP6.9□□□□□ -1.3
LDLRAP1-202ENST00000462394 TET3O43151 1660 aa6.9□□□□□ -1.3
LDLRAP1-202ENST00000462394 SHPRHQ149N8 1683 aa6.9□□□□□ -1.3
LDLRAP1-202ENST00000462394 UBR1Q8IWV7 1749 aa6.9□□□□□ -1.3
LDLRAP1-202ENST00000462394 QTRT2Q9H974 415 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms