RNA–Protein interactions for RNA: ENST00000462324.2

PHGDH-203, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 5

Gene PHGDH, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-203ENST00000462324 NAIPQ13075 1403 aa19.68■□□□□ 0.74
PHGDH-203ENST00000462324 WASHC2CQ9Y4E1 1318 aa19.67■□□□□ 0.74
PHGDH-203ENST00000462324 KANK1Q14678 1352 aa19.67■□□□□ 0.74
PHGDH-203ENST00000462324 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.66■□□□□ 0.745e-16■■□□□ 13.6
PHGDH-203ENST00000462324 CNTLNQ9NXG0 1405 aa19.66■□□□□ 0.74
PHGDH-203ENST00000462324 ADAMTSL3P82987 1691 aa19.64■□□□□ 0.73
PHGDH-203ENST00000462324 FAM135AQ9P2D6 1515 aa19.62■□□□□ 0.73
PHGDH-203ENST00000462324 SETD5Q9C0A6 1442 aa19.61■□□□□ 0.73
PHGDH-203ENST00000462324 RNF17Q9BXT8 1623 aaKnown RBP19.61■□□□□ 0.73
PHGDH-203ENST00000462324 HRCP23327 699 aa19.59■□□□□ 0.73
PHGDH-203ENST00000462324 ZMYM3Q14202 1370 aa19.58■□□□□ 0.73
PHGDH-203ENST00000462324 MADDQ8WXG6 1647 aa19.58■□□□□ 0.72
PHGDH-203ENST00000462324 TRIM52Q96A61 297 aa19.57■□□□□ 0.72
PHGDH-203ENST00000462324 NUP155O75694 1391 aa19.57■□□□□ 0.72
PHGDH-203ENST00000462324 PRDM15P57071 1507 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-203ENST00000462324 KDM5DQ9BY66 1539 aa19.56■□□□□ 0.72
PHGDH-203ENST00000462324 GCC2Q8IWJ2 1684 aa19.56■□□□□ 0.72
PHGDH-203ENST00000462324 PTPRMP28827 1452 aa19.56■□□□□ 0.72
PHGDH-203ENST00000462324 DEPDC5O75140 1603 aa19.54■□□□□ 0.72
PHGDH-203ENST00000462324 FER1L4A9Z1Z3 1794 aa19.54■□□□□ 0.72
PHGDH-203ENST00000462324 MROH1Q8NDA8 1641 aa19.54■□□□□ 0.72
PHGDH-203ENST00000462324 CEBPAP49715 358 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-203ENST00000462324 RAB3GAP2Q9H2M9 1393 aa19.52■□□□□ 0.72
PHGDH-203ENST00000462324 RIMS1Q86UR5 1692 aaKnown RBP19.52■□□□□ 0.71
PHGDH-203ENST00000462324 ABCC3O15438 1527 aa19.51■□□□□ 0.71
PHGDH-203ENST00000462324 PLPPR3Q6T4P5 718 aa19.51■□□□□ 0.71
PHGDH-203ENST00000462324 UNC13BO14795 1591 aa19.51■□□□□ 0.71
PHGDH-203ENST00000462324 VWDEQ8N2E2 1590 aa19.51■□□□□ 0.71
PHGDH-203ENST00000462324 LMTK2Q8IWU2 1503 aa19.51■□□□□ 0.71
PHGDH-203ENST00000462324 ZC3H13Q5T200 1668 aaKnown RBP19.5■□□□□ 0.71
PHGDH-203ENST00000462324 ARHGAP31Q2M1Z3 1444 aa19.5■□□□□ 0.71
PHGDH-203ENST00000462324 MROH2AA6NES4 1674 aa19.49■□□□□ 0.71
PHGDH-203ENST00000462324 CLTCQ00610 1675 aaKnown RBP19.49■□□□□ 0.71
PHGDH-203ENST00000462324 SLC4A1APQ9BWU0 796 aaKnown RBP19.47■□□□□ 0.71
PHGDH-203ENST00000462324 PZPP20742 1482 aa19.47■□□□□ 0.71
PHGDH-203ENST00000462324 NPATQ14207 1427 aa19.46■□□□□ 0.71
PHGDH-203ENST00000462324 FBXO31Q5XUX0 539 aaPredicted RBP19.45■□□□□ 0.7
PHGDH-203ENST00000462324 IQGAP3Q86VI3 1631 aa19.44■□□□□ 0.7
PHGDH-203ENST00000462324 RPRD2Q5VT52 1461 aaKnown RBP19.43■□□□□ 0.7
PHGDH-203ENST00000462324 MPHOSPH9Q99550 1183 aa19.43■□□□□ 0.7
PHGDH-203ENST00000462324 PCGF6Q9BYE7 350 aa19.43■□□□□ 0.7
PHGDH-203ENST00000462324 C3P01024 1663 aa19.42■□□□□ 0.7
PHGDH-203ENST00000462324 CAMSAP1Q5T5Y3 1602 aa19.41■□□□□ 0.7
PHGDH-203ENST00000462324 PKD2Q13563 968 aa19.41■□□□□ 0.7
PHGDH-203ENST00000462324 CEP152O94986 1710 aa19.41■□□□□ 0.7
PHGDH-203ENST00000462324 TET3O43151 1660 aa19.4■□□□□ 0.7
PHGDH-203ENST00000462324 TNRQ92752 1358 aa19.4■□□□□ 0.7
PHGDH-203ENST00000462324 EFCAB6Q5THR3 1501 aa19.4■□□□□ 0.7
PHGDH-203ENST00000462324 ERVK-7P63135 1459 aa19.37■□□□□ 0.69
PHGDH-203ENST00000462324 SLC52A1Q9NWF4 448 aa19.37■□□□□ 0.69
PHGDH-203ENST00000462324 NOS1P29475 1434 aa19.35■□□□□ 0.69
PHGDH-203ENST00000462324 UHRF1BP1Q6BDS2 1440 aa19.35■□□□□ 0.69
PHGDH-203ENST00000462324 SPATA31D1Q6ZQQ2 1576 aa19.35■□□□□ 0.69
PHGDH-203ENST00000462324 NLRP1Q9C000 1473 aa19.33■□□□□ 0.68
PHGDH-203ENST00000462324 SETD1BQ9UPS6 1966 aaKnown RBP19.32■□□□□ 0.68
PHGDH-203ENST00000462324 PTPRTO14522 1441 aa19.31■□□□□ 0.68
PHGDH-203ENST00000462324 E9PCH4 1651 aa19.3■□□□□ 0.68
PHGDH-203ENST00000462324 IDI1Q13907 227 aa19.3■□□□□ 0.68
PHGDH-203ENST00000462324 PREX1Q8TCU6 1659 aa19.3■□□□□ 0.68
PHGDH-203ENST00000462324 FOXD1Q16676 465 aa19.29■□□□□ 0.68
PHGDH-203ENST00000462324 THEMISQ8N1K5 641 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-203ENST00000462324 STAG3Q9UJ98 1225 aa19.29■□□□□ 0.68
PHGDH-203ENST00000462324 A2ML1A8K2U0 1454 aa19.28■□□□□ 0.68
PHGDH-203ENST00000462324 LMTK3Q96Q04 1460 aa19.24■□□□□ 0.67
PHGDH-203ENST00000462324 SYNMO15061 1565 aa19.23■□□□□ 0.67
PHGDH-203ENST00000462324 MYO3AQ8NEV4 1616 aa19.23■□□□□ 0.67
PHGDH-203ENST00000462324 PLA2R1Q13018 1463 aa19.22■□□□□ 0.67
PHGDH-203ENST00000462324 CHGAP10645 457 aaKnown RBP19.22■□□□□ 0.67
PHGDH-203ENST00000462324 CEP170BQ9Y4F5 1589 aaPredicted RBP19.22■□□□□ 0.67
PHGDH-203ENST00000462324 CFAP65Q6ZU64 1925 aaKnown RBP19.21■□□□□ 0.67
PHGDH-203ENST00000462324 TRPM2O94759 1503 aa19.21■□□□□ 0.67
PHGDH-203ENST00000462324 HDGFP51858 240 aaKnown RBP19.21■□□□□ 0.67
PHGDH-203ENST00000462324 UGGT1Q9NYU2 1555 aa19.21■□□□□ 0.67
PHGDH-203ENST00000462324 ANKRD30BQ9BXX2 1392 aa19.2■□□□□ 0.66
PHGDH-203ENST00000462324 CCDC144AA2RUR9 1427 aa19.2■□□□□ 0.66
PHGDH-203ENST00000462324 HSPA2P54652 639 aa19.2■□□□□ 0.66
PHGDH-203ENST00000462324 SPHKAPQ2M3C7 1700 aa19.19■□□□□ 0.66
PHGDH-203ENST00000462324 DHX57Q6P158 1386 aaKnown RBP19.18■□□□□ 0.66
PHGDH-203ENST00000462324 ZNF142P52746 1687 aaPredicted RBP19.17■□□□□ 0.66
PHGDH-203ENST00000462324 ANKLE2Q86XL3 938 aa19.17■□□□□ 0.66
PHGDH-203ENST00000462324 PIK3C2BO00750 1634 aa19.16■□□□□ 0.66
PHGDH-203ENST00000462324 EID1Q9Y6B2 187 aa19.16■□□□□ 0.66
PHGDH-203ENST00000462324 ZNF326Q5BKZ1 582 aaKnown RBP19.14■□□□□ 0.65
PHGDH-203ENST00000462324 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.14■□□□□ 0.65
PHGDH-203ENST00000462324 DMRT2Q9Y5R5 561 aa19.14■□□□□ 0.65
PHGDH-203ENST00000462324 TMEM2Q9UHN6 1383 aa19.14■□□□□ 0.65
PHGDH-203ENST00000462324 KDM5AP29375 1690 aaKnown RBP19.14■□□□□ 0.65
PHGDH-203ENST00000462324 ILDR1Q86SU0 546 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-203ENST00000462324 TXNDC2Q86VQ3 553 aa19.13■□□□□ 0.65
PHGDH-203ENST00000462324 RPGRIP1LQ68CZ1 1315 aa19.13■□□□□ 0.65
PHGDH-203ENST00000462324 ADGRB3O60242 1522 aa19.13■□□□□ 0.65
PHGDH-203ENST00000462324 CLTCL1P53675 1640 aa19.11■□□□□ 0.65
PHGDH-203ENST00000462324 UBR1Q8IWV7 1749 aa19.11■□□□□ 0.65
PHGDH-203ENST00000462324 TMEM131LA2VDJ0 1609 aa19.1■□□□□ 0.65
PHGDH-203ENST00000462324 SLIT1O75093 1534 aa19.1■□□□□ 0.65
PHGDH-203ENST00000462324 NCKAP5LQ9HCH0 1330 aa19.09■□□□□ 0.65
PHGDH-203ENST00000462324 RGL3Q3MIN7 710 aa19.09■□□□□ 0.65
PHGDH-203ENST00000462324 ARHGAP23Q9P227 1491 aa19.09■□□□□ 0.65
PHGDH-203ENST00000462324 PPP1R15AO75807 674 aaPredicted RBP19.08■□□□□ 0.64
PHGDH-203ENST00000462324 RIMS2Q9UQ26 1411 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms