RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 CLSPNQ9HAW4 1339 aa15.71■□□□□ 0.11
RTF1-202ENST00000462276 DIP2CQ9Y2E4 1556 aa15.71■□□□□ 0.11
RTF1-202ENST00000462276 ARHGEF40Q8TER5 1519 aa15.7■□□□□ 0.1
RTF1-202ENST00000462276 MPHOSPH9Q99550 1183 aa15.7■□□□□ 0.1
RTF1-202ENST00000462276 SLC4A1APQ9BWU0 796 aaKnown RBP15.7■□□□□ 0.1
RTF1-202ENST00000462276 ABCA6Q8N139 1617 aa15.68■□□□□ 0.1
RTF1-202ENST00000462276 CCER1Q8TC90 406 aaPredicted RBP15.68■□□□□ 0.1
RTF1-202ENST00000462276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.68■□□□□ 0.13e-6■□□□□ 11
RTF1-202ENST00000462276 EIF2AK4Q9P2K8 1649 aaKnown RBP15.68■□□□□ 0.1
RTF1-202ENST00000462276 GGT6Q6P531 493 aa15.67■□□□□ 0.1
RTF1-202ENST00000462276 DHX57Q6P158 1386 aaKnown RBP15.66■□□□□ 0.1
RTF1-202ENST00000462276 ARID4BQ4LE39 1312 aaPredicted RBP15.66■□□□□ 0.1
RTF1-202ENST00000462276 KDM5DQ9BY66 1539 aa15.65■□□□□ 0.1
RTF1-202ENST00000462276 WASHC2CQ9Y4E1 1318 aa15.65■□□□□ 0.1
RTF1-202ENST00000462276 FAM135AQ9P2D6 1515 aa15.63■□□□□ 0.09
RTF1-202ENST00000462276 BCORL1Q5H9F3 1711 aa15.63■□□□□ 0.09
RTF1-202ENST00000462276 PKD2Q13563 968 aa15.62■□□□□ 0.09
RTF1-202ENST00000462276 PHF23Q9BUL5 403 aaPredicted RBP15.62■□□□□ 0.09
RTF1-202ENST00000462276 ESF1Q9H501 851 aaKnown RBP15.62■□□□□ 0.09
RTF1-202ENST00000462276 UNC13BO14795 1591 aa15.62■□□□□ 0.09
RTF1-202ENST00000462276 PZPP20742 1482 aa15.61■□□□□ 0.09
RTF1-202ENST00000462276 PRDM15P57071 1507 aaPredicted RBP15.6■□□□□ 0.09
RTF1-202ENST00000462276 RNF17Q9BXT8 1623 aaKnown RBP15.6■□□□□ 0.09
RTF1-202ENST00000462276 LMTK2Q8IWU2 1503 aa15.59■□□□□ 0.09
RTF1-202ENST00000462276 DEPDC5O75140 1603 aa15.59■□□□□ 0.09
RTF1-202ENST00000462276 VWDEQ8N2E2 1590 aa15.58■□□□□ 0.09
RTF1-202ENST00000462276 CNTLNQ9NXG0 1405 aa15.58■□□□□ 0.08
RTF1-202ENST00000462276 ARHGAP31Q2M1Z3 1444 aa15.57■□□□□ 0.08
RTF1-202ENST00000462276 MLECQ14165 292 aa15.56■□□□□ 0.08
RTF1-202ENST00000462276 IQGAP3Q86VI3 1631 aa15.55■□□□□ 0.08
RTF1-202ENST00000462276 RPRD2Q5VT52 1461 aaKnown RBP15.55■□□□□ 0.08
RTF1-202ENST00000462276 ANKRD30BQ9BXX2 1392 aa15.55■□□□□ 0.08
RTF1-202ENST00000462276 ZEB1P37275 1124 aaPredicted RBP15.55■□□□□ 0.08
RTF1-202ENST00000462276 TIMELESSQ9UNS1 1208 aa15.55■□□□□ 0.08
RTF1-202ENST00000462276 MROH1Q8NDA8 1641 aa15.54■□□□□ 0.08
RTF1-202ENST00000462276 ABCC3O15438 1527 aa15.53■□□□□ 0.08
RTF1-202ENST00000462276 PTPRTO14522 1441 aa15.51■□□□□ 0.07
RTF1-202ENST00000462276 ZMYM3Q14202 1370 aa15.5■□□□□ 0.07
RTF1-202ENST00000462276 FOXD1Q16676 465 aa15.5■□□□□ 0.07
RTF1-202ENST00000462276 ILDR1Q86SU0 546 aaPredicted RBP15.5■□□□□ 0.07
RTF1-202ENST00000462276 NPATQ14207 1427 aa15.5■□□□□ 0.07
RTF1-202ENST00000462276 SLC52A1Q9NWF4 448 aa15.49■□□□□ 0.07
RTF1-202ENST00000462276 EFCAB6Q5THR3 1501 aa15.48■□□□□ 0.07
RTF1-202ENST00000462276 TET3O43151 1660 aa15.48■□□□□ 0.07
RTF1-202ENST00000462276 ZC3H13Q5T200 1668 aaKnown RBP15.48■□□□□ 0.07
RTF1-202ENST00000462276 CCDC144AA2RUR9 1427 aa15.46■□□□□ 0.07
RTF1-202ENST00000462276 PLA2R1Q13018 1463 aa15.46■□□□□ 0.06
RTF1-202ENST00000462276 NOS1P29475 1434 aa15.45■□□□□ 0.06
RTF1-202ENST00000462276 SIN3AQ96ST3 1273 aa15.44■□□□□ 0.06
RTF1-202ENST00000462276 SIGLEC1Q9BZZ2 1709 aa15.43■□□□□ 0.06
RTF1-202ENST00000462276 NEUROD1Q13562 356 aa15.43■□□□□ 0.06
RTF1-202ENST00000462276 STAC3Q96MF2 364 aa15.43■□□□□ 0.06
RTF1-202ENST00000462276 FBXO31Q5XUX0 539 aaPredicted RBP15.41■□□□□ 0.06
RTF1-202ENST00000462276 TRPM2O94759 1503 aa15.4■□□□□ 0.06
RTF1-202ENST00000462276 ERVK-7P63135 1459 aa15.4■□□□□ 0.06
RTF1-202ENST00000462276 CAMSAP1Q5T5Y3 1602 aa15.39■□□□□ 0.05
RTF1-202ENST00000462276 TONSLQ96HA7 1378 aa15.39■□□□□ 0.05
RTF1-202ENST00000462276 E9PCH4 1651 aa15.38■□□□□ 0.05
RTF1-202ENST00000462276 IDI1Q13907 227 aa15.38■□□□□ 0.05
RTF1-202ENST00000462276 TNRQ92752 1358 aa15.37■□□□□ 0.05
RTF1-202ENST00000462276 MROH2AA6NES4 1674 aa15.37■□□□□ 0.05
RTF1-202ENST00000462276 ADAMTSL3P82987 1691 aa15.36■□□□□ 0.05
RTF1-202ENST00000462276 CEP152O94986 1710 aa15.36■□□□□ 0.05
RTF1-202ENST00000462276 RPGRIP1LQ68CZ1 1315 aa15.36■□□□□ 0.05
RTF1-202ENST00000462276 SPATA31D1Q6ZQQ2 1576 aa15.36■□□□□ 0.05
RTF1-202ENST00000462276 CEBPAP49715 358 aaPredicted RBP15.35■□□□□ 0.05
RTF1-202ENST00000462276 CLTCQ00610 1675 aaKnown RBP15.35■□□□□ 0.05
RTF1-202ENST00000462276 L3MBTL2Q969R5 705 aa15.34■□□□□ 0.05
RTF1-202ENST00000462276 SPATA31E1Q6ZUB1 1445 aa15.34■□□□□ 0.05
RTF1-202ENST00000462276 NLRP1Q9C000 1473 aa15.33■□□□□ 0.05
RTF1-202ENST00000462276 NEURL4Q96JN8 1562 aa15.33■□□□□ 0.05
RTF1-202ENST00000462276 HDGFP51858 240 aaKnown RBP15.33■□□□□ 0.04
RTF1-202ENST00000462276 STAG3Q9UJ98 1225 aa15.33■□□□□ 0.04
RTF1-202ENST00000462276 PPP1R15AO75807 674 aaPredicted RBP15.32■□□□□ 0.04
RTF1-202ENST00000462276 RGL3Q3MIN7 710 aa15.31■□□□□ 0.04
RTF1-202ENST00000462276 PTPRMP28827 1452 aa15.31■□□□□ 0.04
RTF1-202ENST00000462276 SPHKAPQ2M3C7 1700 aa15.31■□□□□ 0.04
RTF1-202ENST00000462276 FER1L4A9Z1Z3 1794 aa15.3■□□□□ 0.04
RTF1-202ENST00000462276 CHGAP10645 457 aaKnown RBP15.3■□□□□ 0.04
RTF1-202ENST00000462276 MADDQ8WXG6 1647 aa15.3■□□□□ 0.04
RTF1-202ENST00000462276 THEMISQ8N1K5 641 aaPredicted RBP15.29■□□□□ 0.04
RTF1-202ENST00000462276 SYNMO15061 1565 aa15.28■□□□□ 0.04
RTF1-202ENST00000462276 VGFO15240 615 aaPredicted RBP15.28■□□□□ 0.04
RTF1-202ENST00000462276 ZNF326Q5BKZ1 582 aaKnown RBP15.28■□□□□ 0.04
RTF1-202ENST00000462276 DCAF11Q8TEB1 546 aa15.28■□□□□ 0.04
RTF1-202ENST00000462276 PREX1Q8TCU6 1659 aa15.28■□□□□ 0.04
RTF1-202ENST00000462276 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.27■□□□□ 0.04
RTF1-202ENST00000462276 PIK3C2BO00750 1634 aa15.26■□□□□ 0.03
RTF1-202ENST00000462276 CLTCL1P53675 1640 aa15.25■□□□□ 0.03
RTF1-202ENST00000462276 PLPPR3Q6T4P5 718 aa15.25■□□□□ 0.03
RTF1-202ENST00000462276 UGGT1Q9NYU2 1555 aa15.24■□□□□ 0.03
RTF1-202ENST00000462276 ADGRB3O60242 1522 aa15.24■□□□□ 0.03
RTF1-202ENST00000462276 C3P01024 1663 aa15.24■□□□□ 0.03
RTF1-202ENST00000462276 ZFYVE9O95405 1425 aa15.24■□□□□ 0.03
RTF1-202ENST00000462276 RIMS1Q86UR5 1692 aaKnown RBP15.23■□□□□ 0.03
RTF1-202ENST00000462276 A2ML1A8K2U0 1454 aa15.23■□□□□ 0.03
RTF1-202ENST00000462276 KDM2AQ9Y2K7 1162 aa15.23■□□□□ 0.03
RTF1-202ENST00000462276 SETD1BQ9UPS6 1966 aaKnown RBP15.23■□□□□ 0.03
RTF1-202ENST00000462276 UHRF1BP1Q6BDS2 1440 aa15.23■□□□□ 0.03
RTF1-202ENST00000462276 EID1Q9Y6B2 187 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms