RNA–Protein interactions for RNA: ENST00000462247.1

ERCC6-204, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 3

Gene ERCC6, Length 660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-204ENST00000462247 SPAG9O60271 1321 aaKnown RBP19.14■□□□□ 0.65
ERCC6-204ENST00000462247 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.14■□□□□ 0.65
ERCC6-204ENST00000462247 CCDC18Q5T9S5 1454 aa19.12■□□□□ 0.65
ERCC6-204ENST00000462247 THEMISQ8N1K5 641 aaPredicted RBP19.12■□□□□ 0.65
ERCC6-204ENST00000462247 STRCP1A6NGW2 1772 aa19.11■□□□□ 0.65
ERCC6-204ENST00000462247 TIAM1Q13009 1591 aa19.11■□□□□ 0.65
ERCC6-204ENST00000462247 MED14O60244 1454 aa19.11■□□□□ 0.65
ERCC6-204ENST00000462247 SYNMO15061 1565 aa19.1■□□□□ 0.65
ERCC6-204ENST00000462247 TNRQ92752 1358 aa19.1■□□□□ 0.65
ERCC6-204ENST00000462247 PLXNC1O60486 1568 aa19.1■□□□□ 0.65
ERCC6-204ENST00000462247 A2MP01023 1474 aa19.09■□□□□ 0.65
ERCC6-204ENST00000462247 DEPDC5O75140 1603 aa19.08■□□□□ 0.65
ERCC6-204ENST00000462247 FBXO31Q5XUX0 539 aaPredicted RBP19.08■□□□□ 0.64
ERCC6-204ENST00000462247 ZNF777Q9ULD5 760 aaPredicted RBP19.07■□□□□ 0.64
ERCC6-204ENST00000462247 IQGAP1P46940 1657 aa19.07■□□□□ 0.64
ERCC6-204ENST00000462247 ATP7AQ04656 1500 aa19.05■□□□□ 0.64
ERCC6-204ENST00000462247 HNRNPMP52272 730 aaKnown RBP eCLIP19.04■□□□□ 0.64
ERCC6-204ENST00000462247 FAM135BQ49AJ0 1406 aa19.03■□□□□ 0.64
ERCC6-204ENST00000462247 KANK4Q5T7N3 995 aaPredicted RBP19.03■□□□□ 0.64
ERCC6-204ENST00000462247 FAM135AQ9P2D6 1515 aa19.03■□□□□ 0.64
ERCC6-204ENST00000462247 MAP3K1Q13233 1512 aa19.02■□□□□ 0.64
ERCC6-204ENST00000462247 SYCP2Q9BX26 1530 aa19.02■□□□□ 0.64
ERCC6-204ENST00000462247 UGGT1Q9NYU2 1555 aa19.02■□□□□ 0.63
ERCC6-204ENST00000462247 CDC42BPAQ5VT25 1732 aa19.01■□□□□ 0.63
ERCC6-204ENST00000462247 EHBP1L1Q8N3D4 1523 aa19■□□□□ 0.63
ERCC6-204ENST00000462247 INO80Q9ULG1 1556 aaPredicted RBP18.99■□□□□ 0.63
ERCC6-204ENST00000462247 LRRC9Q6ZRR7 1453 aa18.99■□□□□ 0.63
ERCC6-204ENST00000462247 NLRP1Q9C000 1473 aa18.98■□□□□ 0.63
ERCC6-204ENST00000462247 TRIM52Q96A61 297 aa18.98■□□□□ 0.63
ERCC6-204ENST00000462247 PZPP20742 1482 aa18.97■□□□□ 0.63
ERCC6-204ENST00000462247 MIA2Q96PC5 1412 aa18.97■□□□□ 0.63
ERCC6-204ENST00000462247 ADGBQ8N7X0 1667 aa18.95■□□□□ 0.62
ERCC6-204ENST00000462247 MTUS2Q5JR59 1369 aa18.95■□□□□ 0.62
ERCC6-204ENST00000462247 XIRP1Q702N8 1843 aaKnown RBP18.95■□□□□ 0.62
ERCC6-204ENST00000462247 PPARGC1BQ86YN6 1023 aaKnown RBP18.93■□□□□ 0.62
ERCC6-204ENST00000462247 ROBO1Q9Y6N7 1651 aa18.92■□□□□ 0.62
ERCC6-204ENST00000462247 KIAA1107Q9UPP5 1409 aa18.91■□□□□ 0.62
ERCC6-204ENST00000462247 ZNF772Q68DY9 489 aaPredicted RBP18.91■□□□□ 0.62
ERCC6-204ENST00000462247 WASHC2CQ9Y4E1 1318 aa18.91■□□□□ 0.62
ERCC6-204ENST00000462247 ZC3H13Q5T200 1668 aaKnown RBP18.91■□□□□ 0.62
ERCC6-204ENST00000462247 NCOA2Q15596 1464 aa18.9■□□□□ 0.62
ERCC6-204ENST00000462247 PLEKHH2Q8IVE3 1493 aa18.9■□□□□ 0.62
ERCC6-204ENST00000462247 KDM5DQ9BY66 1539 aa18.9■□□□□ 0.62
ERCC6-204ENST00000462247 JCADQ9P266 1359 aa18.88■□□□□ 0.61
ERCC6-204ENST00000462247 GPATCH8Q9UKJ3 1502 aaKnown RBP18.88■□□□□ 0.61
ERCC6-204ENST00000462247 KIF3BO15066 747 aa18.87■□□□□ 0.61
ERCC6-204ENST00000462247 MEX3CQ5U5Q3 659 aaKnown RBP18.86■□□□□ 0.61
ERCC6-204ENST00000462247 DHX29Q7Z478 1369 aaKnown RBP18.85■□□□□ 0.61
ERCC6-204ENST00000462247 RXRBP28702 533 aa18.85■□□□□ 0.61
ERCC6-204ENST00000462247 APLP2Q06481 763 aa18.85■□□□□ 0.61
ERCC6-204ENST00000462247 CFDP1Q9UEE9 299 aaPredicted RBP18.85■□□□□ 0.61
ERCC6-204ENST00000462247 PHLPP1O60346 1717 aa18.83■□□□□ 0.6
ERCC6-204ENST00000462247 TMEM94Q12767 1356 aa18.82■□□□□ 0.6
ERCC6-204ENST00000462247 SCAF11Q99590 1463 aaKnown RBP18.82■□□□□ 0.6
ERCC6-204ENST00000462247 TXNDC2Q86VQ3 553 aa18.79■□□□□ 0.6
ERCC6-204ENST00000462247 LRP6O75581 1613 aa18.78■□□□□ 0.6
ERCC6-204ENST00000462247 SPATA31A6Q5VVP1 1343 aa18.78■□□□□ 0.6
ERCC6-204ENST00000462247 LTKP29376 864 aa18.78■□□□□ 0.6
ERCC6-204ENST00000462247 CCNB3Q8WWL7 1395 aa18.78■□□□□ 0.6
ERCC6-204ENST00000462247 CDK12Q9NYV4 1490 aaPredicted RBP18.77■□□□□ 0.6
ERCC6-204ENST00000462247 RTEL1-TNFRSF6BF6WH68 1400 aa18.77■□□□□ 0.6
ERCC6-204ENST00000462247 PROSER2Q86WR7 435 aaPredicted RBP18.75■□□□□ 0.59
ERCC6-204ENST00000462247 RBM33Q96EV2 1170 aaKnown RBP18.75■□□□□ 0.59
ERCC6-204ENST00000462247 SLAIN2Q9P270 581 aa18.75■□□□□ 0.59
ERCC6-204ENST00000462247 MYOM3Q5VTT5 1437 aa18.74■□□□□ 0.59
ERCC6-204ENST00000462247 UBR1Q8IWV7 1749 aa18.74■□□□□ 0.59
ERCC6-204ENST00000462247 FOXD1Q16676 465 aa18.74■□□□□ 0.59
ERCC6-204ENST00000462247 EID1Q9Y6B2 187 aa18.74■□□□□ 0.59
ERCC6-204ENST00000462247 ZRANB1Q9UGI0 708 aa18.73■□□□□ 0.59
ERCC6-204ENST00000462247 ZNF644Q9H582 1327 aaPredicted RBP18.73■□□□□ 0.59
ERCC6-204ENST00000462247 KCNA6P17658 529 aa18.72■□□□□ 0.59
ERCC6-204ENST00000462247 ARHGAP23Q9P227 1491 aa18.71■□□□□ 0.59
ERCC6-204ENST00000462247 COL16A1Q07092 1604 aaPredicted RBP18.71■□□□□ 0.58
ERCC6-204ENST00000462247 FGD6Q6ZV73 1430 aa18.7■□□□□ 0.58
ERCC6-204ENST00000462247 PTPN23Q9H3S7 1636 aa18.7■□□□□ 0.58
ERCC6-204ENST00000462247 CAMSAP2Q08AD1 1489 aa18.7■□□□□ 0.58
ERCC6-204ENST00000462247 MBD5Q9P267 1494 aa18.7■□□□□ 0.58
ERCC6-204ENST00000462247 SLIT1O75093 1534 aa18.69■□□□□ 0.58
ERCC6-204ENST00000462247 MSH6P52701 1360 aa18.69■□□□□ 0.58
ERCC6-204ENST00000462247 ERVK-7P63135 1459 aa18.69■□□□□ 0.58
ERCC6-204ENST00000462247 NUTM2BA6NNL0 878 aaPredicted RBP18.67■□□□□ 0.58
ERCC6-204ENST00000462247 NUTM2EB1AL46 878 aaPredicted RBP18.67■□□□□ 0.58
ERCC6-204ENST00000462247 NUTM2DQ5VT03 806 aaPredicted RBP18.67■□□□□ 0.58
ERCC6-204ENST00000462247 NUTM2AQ8IVF1 878 aaPredicted RBP18.67■□□□□ 0.58
ERCC6-204ENST00000462247 CFAP65Q6ZU64 1925 aaKnown RBP18.66■□□□□ 0.58
ERCC6-204ENST00000462247 PRDM15P57071 1507 aaPredicted RBP18.66■□□□□ 0.58
ERCC6-204ENST00000462247 SETBP1Q9Y6X0 1596 aa18.64■□□□□ 0.58
ERCC6-204ENST00000462247 AFF2P51816 1311 aa18.64■□□□□ 0.57
ERCC6-204ENST00000462247 RGS12O14924 1447 aa18.64■□□□□ 0.57
ERCC6-204ENST00000462247 ABCC3O15438 1527 aa18.64■□□□□ 0.57
ERCC6-204ENST00000462247 SHPRHQ149N8 1683 aa18.63■□□□□ 0.57
ERCC6-204ENST00000462247 SLC26A8Q96RN1 970 aa18.62■□□□□ 0.57
ERCC6-204ENST00000462247 RBM6P78332 1123 aaKnown RBP18.61■□□□□ 0.57
ERCC6-204ENST00000462247 NKTRP30414 1462 aaKnown RBP18.6■□□□□ 0.57
ERCC6-204ENST00000462247 RRBP1Q9P2E9 1410 aaKnown RBP18.59■□□□□ 0.57
ERCC6-204ENST00000462247 ATAD2Q6PL18 1390 aa18.59■□□□□ 0.57
ERCC6-204ENST00000462247 TMEM2Q9UHN6 1383 aa18.59■□□□□ 0.57
ERCC6-204ENST00000462247 QTRT2Q9H974 415 aaKnown RBP18.59■□□□□ 0.57
ERCC6-204ENST00000462247 CROCC2H7BZ55 1655 aa18.59■□□□□ 0.57
ERCC6-204ENST00000462247 ARHGEF5Q12774 1597 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms