RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-222	ENST00000462212	DUOX2	Q9NRD8	1548 aa		12.93	□□□□□ -0.34
ITSN1-222	ENST00000462212	RNF17	Q9BXT8	1623 aa	Known RBP	12.92	□□□□□ -0.34
ITSN1-222	ENST00000462212	NPAT	Q14207	1427 aa		12.92	□□□□□ -0.34
ITSN1-222	ENST00000462212	KIF15	Q9NS87	1388 aa		12.91	□□□□□ -0.34
ITSN1-222	ENST00000462212	ADGRL2	O95490	1459 aa		12.91	□□□□□ -0.34
ITSN1-222	ENST00000462212	NCOA1	Q15788	1441 aa		12.9	□□□□□ -0.34
ITSN1-222	ENST00000462212	KDM5D	Q9BY66	1539 aa		12.9	□□□□□ -0.34
ITSN1-222	ENST00000462212	PTPRK	Q15262	1439 aa		12.89	□□□□□ -0.35
ITSN1-222	ENST00000462212	ERBIN	Q96RT1	1412 aa		12.89	□□□□□ -0.35
ITSN1-222	ENST00000462212	MROH1	Q8NDA8	1641 aa		12.89	□□□□□ -0.35
ITSN1-222	ENST00000462212	UHRF1BP1	Q6BDS2	1440 aa		12.88	□□□□□ -0.35
ITSN1-222	ENST00000462212	FAM50A	Q14320	339 aa	Known RBP	12.88	□□□□□ -0.35
ITSN1-222	ENST00000462212	ANKRD30A	Q9BXX3	1397 aa		12.88	□□□□□ -0.35
ITSN1-222	ENST00000462212	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	12.88	□□□□□ -0.35
ITSN1-222	ENST00000462212	HSPA2	P54652	639 aa		12.87	□□□□□ -0.35
ITSN1-222	ENST00000462212	RRP7BP	Q9NSQ0	103 aa		12.87	□□□□□ -0.35
ITSN1-222	ENST00000462212	PZP	P20742	1482 aa		12.86	□□□□□ -0.35
ITSN1-222	ENST00000462212	PPARGC1B	Q86YN6	1023 aa	Known RBP	12.86	□□□□□ -0.35
ITSN1-222	ENST00000462212	CHIC2	Q9UKJ5	165 aa		12.86	□□□□□ -0.35
ITSN1-222	ENST00000462212	ABCC3	O15438	1527 aa		12.86	□□□□□ -0.35
ITSN1-222	ENST00000462212	PRDM15	P57071	1507 aa	Predicted RBP	12.86	□□□□□ -0.35
ITSN1-222	ENST00000462212	ZC3H13	Q5T200	1668 aa	Known RBP	12.86	□□□□□ -0.35
ITSN1-222	ENST00000462212	WASHC2C	Q9Y4E1	1318 aa		12.86	□□□□□ -0.35
ITSN1-222	ENST00000462212	DEPDC5	O75140	1603 aa		12.85	□□□□□ -0.35
ITSN1-222	ENST00000462212	RRBP1	Q9P2E9	1410 aa	Known RBP	12.84	□□□□□ -0.35
ITSN1-222	ENST00000462212	MYO3A	Q8NEV4	1616 aa		12.83	□□□□□ -0.36
ITSN1-222	ENST00000462212	ZNF142	P52746	1687 aa	Predicted RBP	12.83	□□□□□ -0.36
ITSN1-222	ENST00000462212	ROCK1	Q13464	1354 aa		12.82	□□□□□ -0.36
ITSN1-222	ENST00000462212	VWDE	Q8N2E2	1590 aa		12.81	□□□□□ -0.36
ITSN1-222	ENST00000462212	CEP152	O94986	1710 aa		12.81	□□□□□ -0.36
ITSN1-222	ENST00000462212	STRC	Q7RTU9	1775 aa		12.81	□□□□□ -0.36
ITSN1-222	ENST00000462212	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	12.81	□□□□□ -0.36
ITSN1-222	ENST00000462212	ANKRD50	Q9ULJ7	1429 aa		12.8	□□□□□ -0.36
ITSN1-222	ENST00000462212	FBXO31	Q5XUX0	539 aa	Predicted RBP	12.8	□□□□□ -0.36
ITSN1-222	ENST00000462212	CAMSAP1	Q5T5Y3	1602 aa		12.8	□□□□□ -0.36
ITSN1-222	ENST00000462212	TNR	Q92752	1358 aa		12.8	□□□□□ -0.36
ITSN1-222	ENST00000462212	ARHGAP31	Q2M1Z3	1444 aa		12.79	□□□□□ -0.36
ITSN1-222	ENST00000462212	LMTK2	Q8IWU2	1503 aa		12.79	□□□□□ -0.36
ITSN1-222	ENST00000462212	SPATA31D1	Q6ZQQ2	1576 aa		12.79	□□□□□ -0.36
ITSN1-222	ENST00000462212	A2ML1	A8K2U0	1454 aa		12.78	□□□□□ -0.36
ITSN1-222	ENST00000462212	ERVK-7	P63135	1459 aa		12.78	□□□□□ -0.36
ITSN1-222	ENST00000462212	KANK1	Q14678	1352 aa		12.77	□□□□□ -0.37
ITSN1-222	ENST00000462212	PLA2R1	Q13018	1463 aa		12.77	□□□□□ -0.37
ITSN1-222	ENST00000462212	NLRP1	Q9C000	1473 aa		12.77	□□□□□ -0.37
ITSN1-222	ENST00000462212	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.75	□□□□□ -0.37
ITSN1-222	ENST00000462212	UNC13B	O14795	1591 aa		12.74	□□□□□ -0.37
ITSN1-222	ENST00000462212	PTPRT	O14522	1441 aa		12.74	□□□□□ -0.37
ITSN1-222	ENST00000462212	DMRT2	Q9Y5R5	561 aa		12.74	□□□□□ -0.37
ITSN1-222	ENST00000462212	EFCAB6	Q5THR3	1501 aa		12.73	□□□□□ -0.37
ITSN1-222	ENST00000462212	ITGAE	P38570	1179 aa		12.73	□□□□□ -0.37
ITSN1-222	ENST00000462212	CFAP65	Q6ZU64	1925 aa	Known RBP	12.72	□□□□□ -0.37
ITSN1-222	ENST00000462212	PKD2	Q13563	968 aa		12.71	□□□□□ -0.37
ITSN1-222	ENST00000462212	UGGT1	Q9NYU2	1555 aa		12.71	□□□□□ -0.37
ITSN1-222	ENST00000462212	NOS1	P29475	1434 aa		12.71	□□□□□ -0.38
ITSN1-222	ENST00000462212	TET3	O43151	1660 aa		12.7	□□□□□ -0.38
ITSN1-222	ENST00000462212	RPRD2	Q5VT52	1461 aa	Known RBP	12.7	□□□□□ -0.38
ITSN1-222	ENST00000462212	IQGAP3	Q86VI3	1631 aa		12.7	□□□□□ -0.38
ITSN1-222	ENST00000462212	THEMIS	Q8N1K5	641 aa	Predicted RBP	12.69	□□□□□ -0.38
ITSN1-222	ENST00000462212	NAIP	Q13075	1403 aa		12.69	□□□□□ -0.38
ITSN1-222	ENST00000462212	NCKAP5L	Q9HCH0	1330 aa		12.68	□□□□□ -0.38
ITSN1-222	ENST00000462212	GCC2	Q8IWJ2	1684 aa		12.68	□□□□□ -0.38
ITSN1-222	ENST00000462212	SYNM	O15061	1565 aa		12.68	□□□□□ -0.38
ITSN1-222	ENST00000462212	UBR1	Q8IWV7	1749 aa		12.68	□□□□□ -0.38
ITSN1-222	ENST00000462212	HFM1	A2PYH4	1435 aa		12.67	□□□□□ -0.38
ITSN1-222	ENST00000462212	NEURL4	Q96JN8	1562 aa		12.67	□□□□□ -0.38
ITSN1-222	ENST00000462212	POLR1A	O95602	1720 aa	Predicted RBP	12.66	□□□□□ -0.38
ITSN1-222	ENST00000462212	NUP155	O75694	1391 aa		12.66	□□□□□ -0.38
ITSN1-222	ENST00000462212	KDM5A	P29375	1690 aa	Known RBP	12.65	□□□□□ -0.38
ITSN1-222	ENST00000462212	FOXD1	Q16676	465 aa		12.65	□□□□□ -0.38
ITSN1-222	ENST00000462212	PIK3C2B	O00750	1634 aa		12.65	□□□□□ -0.38
ITSN1-222	ENST00000462212	MED14	O60244	1454 aa		12.65	□□□□□ -0.38
ITSN1-222	ENST00000462212	ARHGAP23	Q9P227	1491 aa		12.65	□□□□□ -0.38
ITSN1-222	ENST00000462212		E9PCH4	1651 aa		12.64	□□□□□ -0.39
ITSN1-222	ENST00000462212	SLIT1	O75093	1534 aa		12.64	□□□□□ -0.39
ITSN1-222	ENST00000462212	IDI1	Q13907	227 aa		12.64	□□□□□ -0.39
ITSN1-222	ENST00000462212	LTBP4	Q8N2S1	1624 aa		12.63	□□□□□ -0.39
ITSN1-222	ENST00000462212	ANKLE2	Q86XL3	938 aa		12.63	□□□□□ -0.39
ITSN1-222	ENST00000462212	SLC52A1	Q9NWF4	448 aa		12.63	□□□□□ -0.39
ITSN1-222	ENST00000462212	CERK	Q8TCT0	537 aa		12.61	□□□□□ -0.39
ITSN1-222	ENST00000462212	FBXO41	Q8TF61	875 aa		12.61	□□□□□ -0.39
ITSN1-222	ENST00000462212	ADGRB3	O60242	1522 aa		12.61	□□□□□ -0.39
ITSN1-222	ENST00000462212	NPHP4	O75161	1426 aa	Predicted RBP	12.61	□□□□□ -0.39
ITSN1-222	ENST00000462212	SCAF11	Q99590	1463 aa	Known RBP	12.6	□□□□□ -0.39
ITSN1-222	ENST00000462212	TMEM2	Q9UHN6	1383 aa		12.6	□□□□□ -0.39
ITSN1-222	ENST00000462212	IQGAP1	P46940	1657 aa		12.59	□□□□□ -0.39
ITSN1-222	ENST00000462212	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	12.59	□□□□□ -0.39
ITSN1-222	ENST00000462212	LTK	P29376	864 aa		12.58	□□□□□ -0.4
ITSN1-222	ENST00000462212	STAG3	Q9UJ98	1225 aa		12.57	□□□□□ -0.4
ITSN1-222	ENST00000462212	TMEM131L	A2VDJ0	1609 aa		12.57	□□□□□ -0.4
ITSN1-222	ENST00000462212	IQSEC2	Q5JU85	1478 aa		12.57	□□□□□ -0.4
ITSN1-222	ENST00000462212	TXNDC2	Q86VQ3	553 aa		12.56	□□□□□ -0.4
ITSN1-222	ENST00000462212	SPHKAP	Q2M3C7	1700 aa		12.56	□□□□□ -0.4
ITSN1-222	ENST00000462212	ZFYVE9	O95405	1425 aa		12.55	□□□□□ -0.4
ITSN1-222	ENST00000462212	EID1	Q9Y6B2	187 aa		12.55	□□□□□ -0.4
ITSN1-222	ENST00000462212	MYO5B	Q9ULV0	1848 aa		12.55	□□□□□ -0.4
ITSN1-222	ENST00000462212	TRPM2	O94759	1503 aa		12.53	□□□□□ -0.4
ITSN1-222	ENST00000462212	CPS1	P31327	1500 aa		12.53	□□□□□ -0.4
ITSN1-222	ENST00000462212	TRIM52	Q96A61	297 aa		12.52	□□□□□ -0.41
ITSN1-222	ENST00000462212	SETD5	Q9C0A6	1442 aa		12.52	□□□□□ -0.41
ITSN1-222	ENST00000462212	ACIN1	Q9UKV3	1341 aa	Known RBP	12.51	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms