RNA–Protein interactions for RNA: ENST00000462202.2

TRIM8-202, Transcript of tripartite motif containing 8, humanhuman

TSL 5

Gene TRIM8, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-202ENST00000462202 WASHC2CQ9Y4E1 1318 aa33.19■■■□□ 2.9
TRIM8-202ENST00000462202 MROH2AA6NES4 1674 aa33.17■■■□□ 2.9
TRIM8-202ENST00000462202 UHRF1BP1Q6BDS2 1440 aa33.16■■■□□ 2.9
TRIM8-202ENST00000462202 ITGAEP38570 1179 aa33.15■■■□□ 2.9
TRIM8-202ENST00000462202 PREX1Q8TCU6 1659 aa33.13■■■□□ 2.89
TRIM8-202ENST00000462202 KDM5DQ9BY66 1539 aa33.12■■■□□ 2.89
TRIM8-202ENST00000462202 EIF2AK4Q9P2K8 1649 aaKnown RBP33.1■■■□□ 2.89
TRIM8-202ENST00000462202 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.09■■■□□ 2.89
TRIM8-202ENST00000462202 NCOA1Q15788 1441 aa33.09■■■□□ 2.89
TRIM8-202ENST00000462202 ERBINQ96RT1 1412 aa33.09■■■□□ 2.89
TRIM8-202ENST00000462202 NPATQ14207 1427 aa33.08■■■□□ 2.89
TRIM8-202ENST00000462202 RNF17Q9BXT8 1623 aaKnown RBP33.06■■■□□ 2.88
TRIM8-202ENST00000462202 PTPRKQ15262 1439 aa33.05■■■□□ 2.88
TRIM8-202ENST00000462202 ADGRL2O95490 1459 aa33.05■■■□□ 2.88
TRIM8-202ENST00000462202 FAM135AQ9P2D6 1515 aa33.04■■■□□ 2.88
TRIM8-202ENST00000462202 SETD1BQ9UPS6 1966 aaKnown RBP33.03■■■□□ 2.88
TRIM8-202ENST00000462202 FBXO31Q5XUX0 539 aaPredicted RBP33■■■□□ 2.87
TRIM8-202ENST00000462202 ABCC3O15438 1527 aa32.98■■■□□ 2.87
TRIM8-202ENST00000462202 KANK1Q14678 1352 aa32.97■■■□□ 2.87
TRIM8-202ENST00000462202 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.97■■■□□ 2.87
TRIM8-202ENST00000462202 MROH1Q8NDA8 1641 aa32.97■■■□□ 2.87
TRIM8-202ENST00000462202 PZPP20742 1482 aa32.96■■■□□ 2.87
TRIM8-202ENST00000462202 ANKRD50Q9ULJ7 1429 aa32.94■■■□□ 2.86
TRIM8-202ENST00000462202 TNRQ92752 1358 aa32.94■■■□□ 2.86
TRIM8-202ENST00000462202 ZC3H13Q5T200 1668 aaKnown RBP32.93■■■□□ 2.86
TRIM8-202ENST00000462202 RRBP1Q9P2E9 1410 aaKnown RBP32.93■■■□□ 2.86
TRIM8-202ENST00000462202 PRDM15P57071 1507 aaPredicted RBP32.91■■■□□ 2.86
TRIM8-202ENST00000462202 ROCK1Q13464 1354 aa32.9■■■□□ 2.86
TRIM8-202ENST00000462202 MYO3AQ8NEV4 1616 aa32.9■■■□□ 2.86
TRIM8-202ENST00000462202 CEP152O94986 1710 aa32.9■■■□□ 2.86
TRIM8-202ENST00000462202 DEPDC5O75140 1603 aa32.85■■■□□ 2.85
TRIM8-202ENST00000462202 CAMSAP1Q5T5Y3 1602 aa32.84■■■□□ 2.85
TRIM8-202ENST00000462202 CEP170BQ9Y4F5 1589 aaPredicted RBP32.84■■■□□ 2.85
TRIM8-202ENST00000462202 A2ML1A8K2U0 1454 aa32.8■■■□□ 2.84
TRIM8-202ENST00000462202 ERVK-7P63135 1459 aa32.79■■■□□ 2.84
TRIM8-202ENST00000462202 DMRT2Q9Y5R5 561 aa32.78■■■□□ 2.84
TRIM8-202ENST00000462202 ZNF142P52746 1687 aaPredicted RBP32.78■■■□□ 2.84
TRIM8-202ENST00000462202 ARHGAP31Q2M1Z3 1444 aa32.74■■■□□ 2.83
TRIM8-202ENST00000462202 SPATA31D1Q6ZQQ2 1576 aa32.74■■■□□ 2.83
TRIM8-202ENST00000462202 NLRP1Q9C000 1473 aa32.74■■■□□ 2.83
TRIM8-202ENST00000462202 NCKAP5LQ9HCH0 1330 aa32.73■■■□□ 2.83
TRIM8-202ENST00000462202 VWDEQ8N2E2 1590 aa32.72■■■□□ 2.83
TRIM8-202ENST00000462202 STRCQ7RTU9 1775 aa32.72■■■□□ 2.83
TRIM8-202ENST00000462202 LMTK2Q8IWU2 1503 aa32.72■■■□□ 2.83
TRIM8-202ENST00000462202 CFAP65Q6ZU64 1925 aaKnown RBP32.71■■■□□ 2.83
TRIM8-202ENST00000462202 THEMISQ8N1K5 641 aaPredicted RBP32.67■■■□□ 2.82
TRIM8-202ENST00000462202 NUP155O75694 1391 aa32.66■■■□□ 2.82
TRIM8-202ENST00000462202 EFCAB6Q5THR3 1501 aa32.66■■■□□ 2.82
TRIM8-202ENST00000462202 UNC13BO14795 1591 aa32.66■■■□□ 2.82
TRIM8-202ENST00000462202 UGGT1Q9NYU2 1555 aa32.66■■■□□ 2.82
TRIM8-202ENST00000462202 PLA2R1Q13018 1463 aa32.65■■■□□ 2.82
TRIM8-202ENST00000462202 PKD2Q13563 968 aa32.64■■■□□ 2.82
TRIM8-202ENST00000462202 PTPRTO14522 1441 aa32.62■■■□□ 2.81
TRIM8-202ENST00000462202 STAG3Q9UJ98 1225 aa32.61■■■□□ 2.81
TRIM8-202ENST00000462202 NAIPQ13075 1403 aa32.6■■■□□ 2.81
TRIM8-202ENST00000462202 ANKLE2Q86XL3 938 aa32.58■■■□□ 2.81
TRIM8-202ENST00000462202 TET3O43151 1660 aa32.57■■■□□ 2.8
TRIM8-202ENST00000462202 RPRD2Q5VT52 1461 aaKnown RBP32.54■■■□□ 2.8
TRIM8-202ENST00000462202 HFM1A2PYH4 1435 aa32.53■■■□□ 2.8
TRIM8-202ENST00000462202 IQGAP3Q86VI3 1631 aa32.53■■■□□ 2.8
TRIM8-202ENST00000462202 IDI1Q13907 227 aa32.52■■■□□ 2.8
TRIM8-202ENST00000462202 TRIM52Q96A61 297 aa32.52■■■□□ 2.8
TRIM8-202ENST00000462202 GCC2Q8IWJ2 1684 aa32.52■■■□□ 2.8
TRIM8-202ENST00000462202 NOS1P29475 1434 aa32.51■■■□□ 2.8
TRIM8-202ENST00000462202 SYNMO15061 1565 aa32.49■■■□□ 2.79
TRIM8-202ENST00000462202 PIK3C2BO00750 1634 aa32.48■■■□□ 2.79
TRIM8-202ENST00000462202 SLC52A1Q9NWF4 448 aa32.47■■■□□ 2.79
TRIM8-202ENST00000462202 UBR1Q8IWV7 1749 aa32.46■■■□□ 2.79
TRIM8-202ENST00000462202 CERKQ8TCT0 537 aa32.45■■■□□ 2.79
TRIM8-202ENST00000462202 POLR1AO95602 1720 aaPredicted RBP32.45■■■□□ 2.78
TRIM8-202ENST00000462202 E9PCH4 1651 aa32.43■■■□□ 2.78
TRIM8-202ENST00000462202 CHGAP10645 457 aaKnown RBP32.43■■■□□ 2.78
TRIM8-202ENST00000462202 ILDR1Q86SU0 546 aaPredicted RBP32.42■■■□□ 2.78
TRIM8-202ENST00000462202 TXNDC2Q86VQ3 553 aa32.42■■■□□ 2.78
TRIM8-202ENST00000462202 EID1Q9Y6B2 187 aa32.42■■■□□ 2.78
TRIM8-202ENST00000462202 NEURL4Q96JN8 1562 aa32.41■■■□□ 2.78
TRIM8-202ENST00000462202 NPHP4O75161 1426 aaPredicted RBP32.41■■■□□ 2.78
TRIM8-202ENST00000462202 ZNF335Q9H4Z2 1342 aaPredicted RBP32.4■■■□□ 2.78
TRIM8-202ENST00000462202 ADGRB3O60242 1522 aa32.36■■■□□ 2.77
TRIM8-202ENST00000462202 SCAF11Q99590 1463 aaKnown RBP32.36■■■□□ 2.77
TRIM8-202ENST00000462202 TMEM2Q9UHN6 1383 aa32.36■■■□□ 2.77
TRIM8-202ENST00000462202 LTKP29376 864 aa32.35■■■□□ 2.77
TRIM8-202ENST00000462202 SLC4A1APQ9BWU0 796 aaKnown RBP32.34■■■□□ 2.77
TRIM8-202ENST00000462202 SLIT1O75093 1534 aa32.34■■■□□ 2.77
TRIM8-202ENST00000462202 FBXO41Q8TF61 875 aa32.33■■■□□ 2.77
TRIM8-202ENST00000462202 MED14O60244 1454 aa32.33■■■□□ 2.77
TRIM8-202ENST00000462202 ARHGAP23Q9P227 1491 aa32.33■■■□□ 2.77
TRIM8-202ENST00000462202 IQGAP1P46940 1657 aa32.3■■■□□ 2.76
TRIM8-202ENST00000462202 KDM5AP29375 1690 aaKnown RBP32.29■■■□□ 2.76
TRIM8-202ENST00000462202 LTBP4Q8N2S1 1624 aa32.29■■■□□ 2.76
TRIM8-202ENST00000462202 BCANQ96GW7 911 aa32.28■■■□□ 2.76
TRIM8-202ENST00000462202 SENP3Q9H4L4 574 aaPredicted RBP32.27■■■□□ 2.76
TRIM8-202ENST00000462202 PPP1R15AO75807 674 aaPredicted RBP32.26■■■□□ 2.75
TRIM8-202ENST00000462202 SETD5Q9C0A6 1442 aa32.26■■■□□ 2.75
TRIM8-202ENST00000462202 SPHKAPQ2M3C7 1700 aa32.23■■■□□ 2.75
TRIM8-202ENST00000462202 HDGFP51858 240 aaKnown RBP32.22■■■□□ 2.75
TRIM8-202ENST00000462202 RIMS2Q9UQ26 1411 aa32.21■■■□□ 2.75
TRIM8-202ENST00000462202 TMEM131LA2VDJ0 1609 aa32.21■■■□□ 2.75
TRIM8-202ENST00000462202 NUTM2DQ5VT03 806 aaPredicted RBP32.19■■■□□ 2.74
TRIM8-202ENST00000462202 FOXD1Q16676 465 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms